data_5H3T
#
_model_server_result.job_id            3_a1Up38KkZOsQVoYpHfBw 
_model_server_result.datetime_utc      '2024-11-23 12:22:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5h3t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":802}' 
#
_entry.id    5H3T 
#
_exptl.entry_id    5H3T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.59 
_cell.angle_gamma         90 
_cell.entry_id            5H3T 
_cell.length_a            113.159 
_cell.length_b            91.007 
_cell.length_c            153.717 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5H3T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,K 1 1 
B,G,H,L 2 1 
C,I,M 3 1 
D,J,N 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5H3T 
_atom_sites.fract_transf_matrix[1][1]    0.008837 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001653 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010988 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006618 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 MGT A 1 801 1 MGT MGT . 
F 3 GOL A 1 802 2 GOL GOL . 
G 2 MGT B 1 801 2 MGT MGT . 
H 3 GOL B 1 802 1 GOL GOL . 
I 2 MGT C 1 801 3 MGT MGT . 
J 2 MGT D 1 801 4 MGT MGT . 
K 4 HOH A 1 901 24 HOH HOH . 
K 4 HOH A 2 902 110 HOH HOH . 
K 4 HOH A 3 903 1 HOH HOH . 
K 4 HOH A 4 904 15 HOH HOH . 
K 4 HOH A 5 905 76 HOH HOH . 
K 4 HOH A 6 906 73 HOH HOH . 
K 4 HOH A 7 907 121 HOH HOH . 
K 4 HOH A 8 908 112 HOH HOH . 
K 4 HOH A 9 909 125 HOH HOH . 
L 4 HOH B 1 901 26 HOH HOH . 
L 4 HOH B 2 902 90 HOH HOH . 
L 4 HOH B 3 903 33 HOH HOH . 
L 4 HOH B 4 904 83 HOH HOH . 
L 4 HOH B 5 905 32 HOH HOH . 
L 4 HOH B 6 906 85 HOH HOH . 
L 4 HOH B 7 907 5 HOH HOH . 
L 4 HOH B 8 908 113 HOH HOH . 
L 4 HOH B 9 909 9 HOH HOH . 
L 4 HOH B 10 910 120 HOH HOH . 
L 4 HOH B 11 911 11 HOH HOH . 
L 4 HOH B 12 912 66 HOH HOH . 
L 4 HOH B 13 913 17 HOH HOH . 
L 4 HOH B 14 914 105 HOH HOH . 
L 4 HOH B 15 915 45 HOH HOH . 
L 4 HOH B 16 916 86 HOH HOH . 
L 4 HOH B 17 917 57 HOH HOH . 
L 4 HOH B 18 918 13 HOH HOH . 
L 4 HOH B 19 919 49 HOH HOH . 
L 4 HOH B 20 920 114 HOH HOH . 
L 4 HOH B 21 921 58 HOH HOH . 
L 4 HOH B 22 922 55 HOH HOH . 
L 4 HOH B 23 923 56 HOH HOH . 
L 4 HOH B 24 924 115 HOH HOH . 
L 4 HOH B 25 925 117 HOH HOH . 
L 4 HOH B 26 926 37 HOH HOH . 
M 4 HOH C 1 901 74 HOH HOH . 
M 4 HOH C 2 902 31 HOH HOH . 
M 4 HOH C 3 903 20 HOH HOH . 
M 4 HOH C 4 904 99 HOH HOH . 
M 4 HOH C 5 905 10 HOH HOH . 
M 4 HOH C 6 906 65 HOH HOH . 
M 4 HOH C 7 907 94 HOH HOH . 
M 4 HOH C 8 908 19 HOH HOH . 
M 4 HOH C 9 909 92 HOH HOH . 
M 4 HOH C 10 910 41 HOH HOH . 
M 4 HOH C 11 911 36 HOH HOH . 
M 4 HOH C 12 912 87 HOH HOH . 
M 4 HOH C 13 913 69 HOH HOH . 
M 4 HOH C 14 914 23 HOH HOH . 
M 4 HOH C 15 915 111 HOH HOH . 
M 4 HOH C 16 916 29 HOH HOH . 
M 4 HOH C 17 917 72 HOH HOH . 
M 4 HOH C 18 918 51 HOH HOH . 
M 4 HOH C 19 919 82 HOH HOH . 
M 4 HOH C 20 920 42 HOH HOH . 
M 4 HOH C 21 921 48 HOH HOH . 
M 4 HOH C 22 922 39 HOH HOH . 
M 4 HOH C 23 923 30 HOH HOH . 
M 4 HOH C 24 924 21 HOH HOH . 
M 4 HOH C 25 925 22 HOH HOH . 
M 4 HOH C 26 926 80 HOH HOH . 
M 4 HOH C 27 927 7 HOH HOH . 
M 4 HOH C 28 928 40 HOH HOH . 
M 4 HOH C 29 929 54 HOH HOH . 
M 4 HOH C 30 930 46 HOH HOH . 
M 4 HOH C 31 931 12 HOH HOH . 
M 4 HOH C 32 932 77 HOH HOH . 
M 4 HOH C 33 933 100 HOH HOH . 
M 4 HOH C 34 934 62 HOH HOH . 
M 4 HOH C 35 935 79 HOH HOH . 
M 4 HOH C 36 936 59 HOH HOH . 
M 4 HOH C 37 937 52 HOH HOH . 
M 4 HOH C 38 938 53 HOH HOH . 
M 4 HOH C 39 939 107 HOH HOH . 
M 4 HOH C 40 940 44 HOH HOH . 
M 4 HOH C 41 941 60 HOH HOH . 
M 4 HOH C 42 942 43 HOH HOH . 
M 4 HOH C 43 943 103 HOH HOH . 
M 4 HOH C 44 944 75 HOH HOH . 
M 4 HOH C 45 945 119 HOH HOH . 
M 4 HOH C 46 946 63 HOH HOH . 
M 4 HOH C 47 947 18 HOH HOH . 
M 4 HOH C 48 948 109 HOH HOH . 
M 4 HOH C 49 949 34 HOH HOH . 
M 4 HOH C 50 950 118 HOH HOH . 
M 4 HOH C 51 951 61 HOH HOH . 
M 4 HOH C 52 952 89 HOH HOH . 
M 4 HOH C 53 953 96 HOH HOH . 
M 4 HOH C 54 954 104 HOH HOH . 
N 4 HOH D 1 901 47 HOH HOH . 
N 4 HOH D 2 902 27 HOH HOH . 
N 4 HOH D 3 903 116 HOH HOH . 
N 4 HOH D 4 904 50 HOH HOH . 
N 4 HOH D 5 905 38 HOH HOH . 
N 4 HOH D 6 906 106 HOH HOH . 
N 4 HOH D 7 907 3 HOH HOH . 
N 4 HOH D 8 908 68 HOH HOH . 
N 4 HOH D 9 909 35 HOH HOH . 
N 4 HOH D 10 910 64 HOH HOH . 
N 4 HOH D 11 911 8 HOH HOH . 
N 4 HOH D 12 912 14 HOH HOH . 
N 4 HOH D 13 913 67 HOH HOH . 
N 4 HOH D 14 914 4 HOH HOH . 
N 4 HOH D 15 915 81 HOH HOH . 
N 4 HOH D 16 916 71 HOH HOH . 
N 4 HOH D 17 917 78 HOH HOH . 
N 4 HOH D 18 918 98 HOH HOH . 
N 4 HOH D 19 919 93 HOH HOH . 
N 4 HOH D 20 920 70 HOH HOH . 
N 4 HOH D 21 921 6 HOH HOH . 
N 4 HOH D 22 922 2 HOH HOH . 
N 4 HOH D 23 923 123 HOH HOH . 
N 4 HOH D 24 924 16 HOH HOH . 
N 4 HOH D 25 925 122 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 3 42.72 45.954 198.601 1 75.7 ? C1 GOL 802 B 1 
HETATM 2 O O1 GOL . . . H 3 43.983 45.279 198.63 1 59.58 ? O1 GOL 802 B 1 
HETATM 3 C C2 GOL . . . H 3 42.893 47.378 199.114 1 59.93 ? C2 GOL 802 B 1 
HETATM 4 O O2 GOL . . . H 3 42.856 47.379 200.545 1 5.43 ? O2 GOL 802 B 1 
HETATM 5 C C3 GOL . . . H 3 41.765 48.252 198.577 1 65.52 ? C3 GOL 802 B 1 
HETATM 6 O O3 GOL . . . H 3 42.278 49.123 197.563 1 60.92 ? O3 GOL 802 B 1 
#
_model_server_stats.io_time_ms              43 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#