data_5H5Q
#
_model_server_result.job_id            z_BigM02H0O96o3uJgSm4w 
_model_server_result.datetime_utc      '2024-11-18 09:47:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5h5q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    5H5Q 
#
_exptl.entry_id    5H5Q 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.41 
_cell.angle_gamma         90 
_cell.entry_id            5H5Q 
_cell.length_a            32.746 
_cell.length_b            72.242 
_cell.length_c            39.616 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5H5Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 2 B CYS 901 1_555 B SG CYS 12 B CYS 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
covale ? covale1 A C GLN 44 A GLN 72 1_555 A N OCS 45 A OCS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale2 A C OCS 45 A OCS 73 1_555 A N GLY 46 A GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale3 B C ACE 1 B ACE 900 1_555 B N CYS 2 B CYS 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale4 B C ARG 14 B ARG 913 1_555 B N NH2 15 B NH2 914 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 135 n n 
C1 C2 GOL sing 136 n n 
C1 H11 GOL sing 137 n n 
C1 H12 GOL sing 138 n n 
O1 HO1 GOL sing 139 n n 
C2 O2 GOL sing 140 n n 
C2 C3 GOL sing 141 n n 
C2 H2 GOL sing 142 n n 
O2 HO2 GOL sing 143 n n 
C3 O3 GOL sing 144 n n 
C3 H31 GOL sing 145 n n 
C3 H32 GOL sing 146 n n 
O3 HO3 GOL sing 147 n n 
#
_atom_sites.entry_id                     5H5Q 
_atom_sites.fract_transf_matrix[1][1]    0.030538 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.010165 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013842 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026604 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 201 1 GOL GOL . 
D 3 GOL A 1 202 2 GOL GOL . 
E 4 HOH A 1 301 120 HOH HOH . 
E 4 HOH A 2 302 7 HOH HOH . 
E 4 HOH A 3 303 98 HOH HOH . 
E 4 HOH A 4 304 33 HOH HOH . 
E 4 HOH A 5 305 137 HOH HOH . 
E 4 HOH A 6 306 119 HOH HOH . 
E 4 HOH A 7 307 31 HOH HOH . 
E 4 HOH A 8 308 112 HOH HOH . 
E 4 HOH A 9 309 24 HOH HOH . 
E 4 HOH A 10 310 84 HOH HOH . 
E 4 HOH A 11 311 67 HOH HOH . 
E 4 HOH A 12 312 6 HOH HOH . 
E 4 HOH A 13 313 50 HOH HOH . 
E 4 HOH A 14 314 109 HOH HOH . 
E 4 HOH A 15 315 61 HOH HOH . 
E 4 HOH A 16 316 28 HOH HOH . 
E 4 HOH A 17 317 116 HOH HOH . 
E 4 HOH A 18 318 42 HOH HOH . 
E 4 HOH A 19 319 8 HOH HOH . 
E 4 HOH A 20 320 90 HOH HOH . 
E 4 HOH A 21 321 53 HOH HOH . 
E 4 HOH A 22 322 79 HOH HOH . 
E 4 HOH A 23 323 13 HOH HOH . 
E 4 HOH A 24 324 14 HOH HOH . 
E 4 HOH A 25 325 40 HOH HOH . 
E 4 HOH A 26 326 134 HOH HOH . 
E 4 HOH A 27 327 30 HOH HOH . 
E 4 HOH A 28 328 115 HOH HOH . 
E 4 HOH A 29 329 57 HOH HOH . 
E 4 HOH A 30 330 43 HOH HOH . 
E 4 HOH A 31 331 17 HOH HOH . 
E 4 HOH A 32 332 32 HOH HOH . 
E 4 HOH A 33 333 94 HOH HOH . 
E 4 HOH A 34 334 4 HOH HOH . 
E 4 HOH A 35 335 44 HOH HOH . 
E 4 HOH A 36 336 80 HOH HOH . 
E 4 HOH A 37 337 65 HOH HOH . 
E 4 HOH A 38 338 68 HOH HOH . 
E 4 HOH A 39 339 62 HOH HOH . 
E 4 HOH A 40 340 2 HOH HOH . 
E 4 HOH A 41 341 12 HOH HOH . 
E 4 HOH A 42 342 77 HOH HOH . 
E 4 HOH A 43 343 86 HOH HOH . 
E 4 HOH A 44 344 26 HOH HOH . 
E 4 HOH A 45 345 70 HOH HOH . 
E 4 HOH A 46 346 118 HOH HOH . 
E 4 HOH A 47 347 89 HOH HOH . 
E 4 HOH A 48 348 3 HOH HOH . 
E 4 HOH A 49 349 54 HOH HOH . 
E 4 HOH A 50 350 122 HOH HOH . 
E 4 HOH A 51 351 22 HOH HOH . 
E 4 HOH A 52 352 123 HOH HOH . 
E 4 HOH A 53 353 126 HOH HOH . 
E 4 HOH A 54 354 5 HOH HOH . 
E 4 HOH A 55 355 1 HOH HOH . 
E 4 HOH A 56 356 110 HOH HOH . 
E 4 HOH A 57 357 18 HOH HOH . 
E 4 HOH A 58 358 15 HOH HOH . 
E 4 HOH A 59 359 140 HOH HOH . 
E 4 HOH A 60 360 29 HOH HOH . 
E 4 HOH A 61 361 35 HOH HOH . 
E 4 HOH A 62 362 58 HOH HOH . 
E 4 HOH A 63 363 48 HOH HOH . 
E 4 HOH A 64 364 9 HOH HOH . 
E 4 HOH A 65 365 37 HOH HOH . 
E 4 HOH A 66 366 25 HOH HOH . 
E 4 HOH A 67 367 74 HOH HOH . 
E 4 HOH A 68 368 127 HOH HOH . 
E 4 HOH A 69 369 92 HOH HOH . 
E 4 HOH A 70 370 117 HOH HOH . 
E 4 HOH A 71 371 99 HOH HOH . 
E 4 HOH A 72 372 41 HOH HOH . 
E 4 HOH A 73 373 102 HOH HOH . 
E 4 HOH A 74 374 82 HOH HOH . 
E 4 HOH A 75 375 135 HOH HOH . 
E 4 HOH A 76 376 71 HOH HOH . 
E 4 HOH A 77 377 87 HOH HOH . 
E 4 HOH A 78 378 20 HOH HOH . 
E 4 HOH A 79 379 52 HOH HOH . 
E 4 HOH A 80 380 66 HOH HOH . 
E 4 HOH A 81 381 23 HOH HOH . 
E 4 HOH A 82 382 39 HOH HOH . 
E 4 HOH A 83 383 45 HOH HOH . 
E 4 HOH A 84 384 78 HOH HOH . 
E 4 HOH A 85 385 19 HOH HOH . 
E 4 HOH A 86 386 47 HOH HOH . 
E 4 HOH A 87 387 105 HOH HOH . 
E 4 HOH A 88 388 136 HOH HOH . 
E 4 HOH A 89 389 63 HOH HOH . 
E 4 HOH A 90 390 60 HOH HOH . 
E 4 HOH A 91 391 104 HOH HOH . 
E 4 HOH A 92 392 27 HOH HOH . 
E 4 HOH A 93 393 93 HOH HOH . 
E 4 HOH A 94 394 59 HOH HOH . 
E 4 HOH A 95 395 34 HOH HOH . 
E 4 HOH A 96 396 16 HOH HOH . 
E 4 HOH A 97 397 83 HOH HOH . 
E 4 HOH A 98 398 49 HOH HOH . 
E 4 HOH A 99 399 51 HOH HOH . 
E 4 HOH A 100 400 75 HOH HOH . 
E 4 HOH A 101 401 72 HOH HOH . 
E 4 HOH A 102 402 88 HOH HOH . 
E 4 HOH A 103 403 56 HOH HOH . 
E 4 HOH A 104 404 139 HOH HOH . 
E 4 HOH A 105 405 129 HOH HOH . 
E 4 HOH A 106 406 133 HOH HOH . 
E 4 HOH A 107 407 132 HOH HOH . 
E 4 HOH A 108 408 130 HOH HOH . 
E 4 HOH A 109 409 111 HOH HOH . 
E 4 HOH A 110 410 100 HOH HOH . 
E 4 HOH A 111 411 121 HOH HOH . 
E 4 HOH A 112 412 124 HOH HOH . 
E 4 HOH A 113 413 113 HOH HOH . 
E 4 HOH A 114 414 73 HOH HOH . 
E 4 HOH A 115 415 96 HOH HOH . 
E 4 HOH A 116 416 95 HOH HOH . 
E 4 HOH A 117 417 21 HOH HOH . 
E 4 HOH A 118 418 11 HOH HOH . 
E 4 HOH A 119 419 101 HOH HOH . 
E 4 HOH A 120 420 85 HOH HOH . 
E 4 HOH A 121 421 91 HOH HOH . 
E 4 HOH A 122 422 128 HOH HOH . 
E 4 HOH A 123 423 10 HOH HOH . 
E 4 HOH A 124 424 125 HOH HOH . 
E 4 HOH A 125 425 138 HOH HOH . 
E 4 HOH A 126 426 81 HOH HOH . 
E 4 HOH A 127 427 103 HOH HOH . 
E 4 HOH A 128 428 46 HOH HOH . 
E 4 HOH A 129 429 97 HOH HOH . 
E 4 HOH A 130 430 64 HOH HOH . 
E 4 HOH A 131 431 131 HOH HOH . 
F 4 HOH B 1 1001 69 HOH HOH . 
F 4 HOH B 2 1002 38 HOH HOH . 
F 4 HOH B 3 1003 36 HOH HOH . 
F 4 HOH B 4 1004 108 HOH HOH . 
F 4 HOH B 5 1005 76 HOH HOH . 
F 4 HOH B 6 1006 107 HOH HOH . 
F 4 HOH B 7 1007 55 HOH HOH . 
F 4 HOH B 8 1008 114 HOH HOH . 
F 4 HOH B 9 1009 106 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 -19.984 17.667 -17.094 1 13.39 ? C1 GOL 201 A 1 
HETATM 2 O O1 GOL . . . C 3 -20.404 19.029 -17.029 1 12.42 ? O1 GOL 201 A 1 
HETATM 3 C C2 GOL . . . C 3 -18.822 17.4 -16.137 1 13.65 ? C2 GOL 201 A 1 
HETATM 4 O O2 GOL . . . C 3 -19.062 17.985 -14.856 1 13.65 ? O2 GOL 201 A 1 
HETATM 5 C C3 GOL . . . C 3 -17.524 17.957 -16.704 1 14.05 ? C3 GOL 201 A 1 
HETATM 6 O O3 GOL . . . C 3 -16.444 17.689 -15.795 1 14.51 ? O3 GOL 201 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           351 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#