data_5H68 # _model_server_result.job_id '_JKJrN84VvvGi3UGttLr2g' _model_server_result.datetime_utc '2024-11-26 04:03:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5h68 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":702}' # _entry.id 5H68 # _exptl.entry_id 5H68 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.11 _cell.angle_gamma 90 _cell.entry_id 5H68 _cell.length_a 70.339 _cell.length_b 65.835 _cell.length_c 77.923 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5H68 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 41 A SER 38 1_555 D MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc2 A OE1 GLN 146 A GLN 143 1_555 D MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc3 C O2G AGS . A AGS 701 1_555 D MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? metalc ? metalc4 C O2B AGS . A AGS 701 1_555 D MG MG . A MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc5 D MG MG . A MG 702 1_555 G O HOH . A HOH 1223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc6 D MG MG . A MG 702 1_555 G O HOH . A HOH 1244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc7 B OG SER 41 B SER 38 1_555 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc8 B OE1 GLN 146 B GLN 143 1_555 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc9 E O2G AGS . B AGS 701 1_555 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc10 E O1B AGS . B AGS 701 1_555 F MG MG . B MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc11 F MG MG . B MG 702 1_555 H O HOH . B HOH 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc12 F MG MG . B MG 702 1_555 H O HOH . B HOH 1242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5H68 _atom_sites.fract_transf_matrix[1][1] 0.014217 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004651 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015189 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013502 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AGS A 1 701 1 AGS AGS . D 3 MG A 1 702 1 MG MG . E 2 AGS B 1 701 1 AGS AGS . F 3 MG B 1 702 1 MG MG . G 4 HOH A 1 1201 149 HOH HOH . G 4 HOH A 2 1202 137 HOH HOH . G 4 HOH A 3 1203 86 HOH HOH . G 4 HOH A 4 1204 152 HOH HOH . G 4 HOH A 5 1205 162 HOH HOH . G 4 HOH A 6 1206 70 HOH HOH . G 4 HOH A 7 1207 6 HOH HOH . G 4 HOH A 8 1208 66 HOH HOH . G 4 HOH A 9 1209 96 HOH HOH . G 4 HOH A 10 1210 124 HOH HOH . G 4 HOH A 11 1211 122 HOH HOH . G 4 HOH A 12 1212 52 HOH HOH . G 4 HOH A 13 1213 100 HOH HOH . G 4 HOH A 14 1214 176 HOH HOH . G 4 HOH A 15 1215 187 HOH HOH . G 4 HOH A 16 1216 24 HOH HOH . G 4 HOH A 17 1217 53 HOH HOH . G 4 HOH A 18 1218 93 HOH HOH . G 4 HOH A 19 1219 128 HOH HOH . G 4 HOH A 20 1220 36 HOH HOH . G 4 HOH A 21 1221 109 HOH HOH . G 4 HOH A 22 1222 91 HOH HOH . G 4 HOH A 23 1223 2 HOH HOH . G 4 HOH A 24 1224 238 HOH HOH . G 4 HOH A 25 1225 103 HOH HOH . G 4 HOH A 26 1226 44 HOH HOH . G 4 HOH A 27 1227 43 HOH HOH . G 4 HOH A 28 1228 49 HOH HOH . G 4 HOH A 29 1229 82 HOH HOH . G 4 HOH A 30 1230 146 HOH HOH . G 4 HOH A 31 1231 37 HOH HOH . G 4 HOH A 32 1232 201 HOH HOH . G 4 HOH A 33 1233 35 HOH HOH . G 4 HOH A 34 1234 31 HOH HOH . G 4 HOH A 35 1235 182 HOH HOH . G 4 HOH A 36 1236 148 HOH HOH . G 4 HOH A 37 1237 181 HOH HOH . G 4 HOH A 38 1238 77 HOH HOH . G 4 HOH A 39 1239 170 HOH HOH . G 4 HOH A 40 1240 60 HOH HOH . G 4 HOH A 41 1241 22 HOH HOH . G 4 HOH A 42 1242 185 HOH HOH . G 4 HOH A 43 1243 90 HOH HOH . G 4 HOH A 44 1244 4 HOH HOH . G 4 HOH A 45 1245 190 HOH HOH . G 4 HOH A 46 1246 48 HOH HOH . G 4 HOH A 47 1247 21 HOH HOH . G 4 HOH A 48 1248 10 HOH HOH . G 4 HOH A 49 1249 141 HOH HOH . G 4 HOH A 50 1250 8 HOH HOH . G 4 HOH A 51 1251 47 HOH HOH . G 4 HOH A 52 1252 62 HOH HOH . G 4 HOH A 53 1253 56 HOH HOH . G 4 HOH A 54 1254 3 HOH HOH . G 4 HOH A 55 1255 235 HOH HOH . G 4 HOH A 56 1256 74 HOH HOH . G 4 HOH A 57 1257 38 HOH HOH . G 4 HOH A 58 1258 32 HOH HOH . G 4 HOH A 59 1259 138 HOH HOH . G 4 HOH A 60 1260 17 HOH HOH . G 4 HOH A 61 1261 121 HOH HOH . G 4 HOH A 62 1262 205 HOH HOH . G 4 HOH A 63 1263 163 HOH HOH . G 4 HOH A 64 1264 41 HOH HOH . G 4 HOH A 65 1265 236 HOH HOH . G 4 HOH A 66 1266 179 HOH HOH . G 4 HOH A 67 1267 28 HOH HOH . G 4 HOH A 68 1268 34 HOH HOH . G 4 HOH A 69 1269 195 HOH HOH . G 4 HOH A 70 1270 123 HOH HOH . G 4 HOH A 71 1271 78 HOH HOH . G 4 HOH A 72 1272 207 HOH HOH . G 4 HOH A 73 1273 237 HOH HOH . G 4 HOH A 74 1274 197 HOH HOH . G 4 HOH A 75 1275 46 HOH HOH . G 4 HOH A 76 1276 174 HOH HOH . G 4 HOH A 77 1277 97 HOH HOH . G 4 HOH A 78 1278 33 HOH HOH . G 4 HOH A 79 1279 25 HOH HOH . G 4 HOH A 80 1280 193 HOH HOH . G 4 HOH A 81 1281 81 HOH HOH . G 4 HOH A 82 1282 242 HOH HOH . G 4 HOH A 83 1283 127 HOH HOH . G 4 HOH A 84 1284 239 HOH HOH . G 4 HOH A 85 1285 69 HOH HOH . G 4 HOH A 86 1286 73 HOH HOH . G 4 HOH A 87 1287 57 HOH HOH . G 4 HOH A 88 1288 203 HOH HOH . G 4 HOH A 89 1289 85 HOH HOH . G 4 HOH A 90 1290 84 HOH HOH . G 4 HOH A 91 1291 11 HOH HOH . G 4 HOH A 92 1292 175 HOH HOH . G 4 HOH A 93 1293 232 HOH HOH . G 4 HOH A 94 1294 13 HOH HOH . G 4 HOH A 95 1295 135 HOH HOH . G 4 HOH A 96 1296 131 HOH HOH . G 4 HOH A 97 1297 132 HOH HOH . G 4 HOH A 98 1298 18 HOH HOH . G 4 HOH A 99 1299 120 HOH HOH . G 4 HOH A 100 1300 157 HOH HOH . G 4 HOH A 101 1301 140 HOH HOH . G 4 HOH A 102 1302 115 HOH HOH . G 4 HOH A 103 1303 55 HOH HOH . G 4 HOH A 104 1304 68 HOH HOH . G 4 HOH A 105 1305 202 HOH HOH . G 4 HOH A 106 1306 79 HOH HOH . G 4 HOH A 107 1307 155 HOH HOH . G 4 HOH A 108 1308 166 HOH HOH . G 4 HOH A 109 1309 192 HOH HOH . G 4 HOH A 110 1310 136 HOH HOH . G 4 HOH A 111 1311 83 HOH HOH . G 4 HOH A 112 1312 222 HOH HOH . G 4 HOH A 113 1313 27 HOH HOH . G 4 HOH A 114 1314 154 HOH HOH . G 4 HOH A 115 1315 54 HOH HOH . G 4 HOH A 116 1316 7 HOH HOH . G 4 HOH A 117 1317 227 HOH HOH . G 4 HOH A 118 1318 168 HOH HOH . G 4 HOH A 119 1319 233 HOH HOH . G 4 HOH A 120 1320 158 HOH HOH . G 4 HOH A 121 1321 230 HOH HOH . G 4 HOH A 122 1322 50 HOH HOH . G 4 HOH A 123 1323 218 HOH HOH . G 4 HOH A 124 1324 92 HOH HOH . G 4 HOH A 125 1325 199 HOH HOH . G 4 HOH A 126 1326 111 HOH HOH . G 4 HOH A 127 1327 87 HOH HOH . G 4 HOH A 128 1328 159 HOH HOH . G 4 HOH A 129 1329 169 HOH HOH . G 4 HOH A 130 1330 216 HOH HOH . G 4 HOH A 131 1331 212 HOH HOH . G 4 HOH A 132 1332 210 HOH HOH . G 4 HOH A 133 1333 126 HOH HOH . G 4 HOH A 134 1334 204 HOH HOH . H 4 HOH B 1 1201 226 HOH HOH . H 4 HOH B 2 1202 153 HOH HOH . H 4 HOH B 3 1203 40 HOH HOH . H 4 HOH B 4 1204 191 HOH HOH . H 4 HOH B 5 1205 161 HOH HOH . H 4 HOH B 6 1206 156 HOH HOH . H 4 HOH B 7 1207 101 HOH HOH . H 4 HOH B 8 1208 160 HOH HOH . H 4 HOH B 9 1209 104 HOH HOH . H 4 HOH B 10 1210 211 HOH HOH . H 4 HOH B 11 1211 147 HOH HOH . H 4 HOH B 12 1212 29 HOH HOH . H 4 HOH B 13 1213 150 HOH HOH . H 4 HOH B 14 1214 14 HOH HOH . H 4 HOH B 15 1215 213 HOH HOH . H 4 HOH B 16 1216 42 HOH HOH . H 4 HOH B 17 1217 186 HOH HOH . H 4 HOH B 18 1218 20 HOH HOH . H 4 HOH B 19 1219 106 HOH HOH . H 4 HOH B 20 1220 220 HOH HOH . H 4 HOH B 21 1221 71 HOH HOH . H 4 HOH B 22 1222 63 HOH HOH . H 4 HOH B 23 1223 80 HOH HOH . H 4 HOH B 24 1224 12 HOH HOH . H 4 HOH B 25 1225 221 HOH HOH . H 4 HOH B 26 1226 45 HOH HOH . H 4 HOH B 27 1227 67 HOH HOH . H 4 HOH B 28 1228 143 HOH HOH . H 4 HOH B 29 1229 99 HOH HOH . H 4 HOH B 30 1230 112 HOH HOH . H 4 HOH B 31 1231 208 HOH HOH . H 4 HOH B 32 1232 39 HOH HOH . H 4 HOH B 33 1233 117 HOH HOH . H 4 HOH B 34 1234 224 HOH HOH . H 4 HOH B 35 1235 231 HOH HOH . H 4 HOH B 36 1236 102 HOH HOH . H 4 HOH B 37 1237 194 HOH HOH . H 4 HOH B 38 1238 133 HOH HOH . H 4 HOH B 39 1239 167 HOH HOH . H 4 HOH B 40 1240 165 HOH HOH . H 4 HOH B 41 1241 61 HOH HOH . H 4 HOH B 42 1242 1 HOH HOH . H 4 HOH B 43 1243 241 HOH HOH . H 4 HOH B 44 1244 75 HOH HOH . H 4 HOH B 45 1245 105 HOH HOH . H 4 HOH B 46 1246 118 HOH HOH . H 4 HOH B 47 1247 23 HOH HOH . H 4 HOH B 48 1248 51 HOH HOH . H 4 HOH B 49 1249 217 HOH HOH . H 4 HOH B 50 1250 16 HOH HOH . H 4 HOH B 51 1251 172 HOH HOH . H 4 HOH B 52 1252 113 HOH HOH . H 4 HOH B 53 1253 98 HOH HOH . H 4 HOH B 54 1254 30 HOH HOH . H 4 HOH B 55 1255 119 HOH HOH . H 4 HOH B 56 1256 142 HOH HOH . H 4 HOH B 57 1257 116 HOH HOH . H 4 HOH B 58 1258 125 HOH HOH . H 4 HOH B 59 1259 134 HOH HOH . H 4 HOH B 60 1260 139 HOH HOH . H 4 HOH B 61 1261 229 HOH HOH . H 4 HOH B 62 1262 19 HOH HOH . H 4 HOH B 63 1263 26 HOH HOH . H 4 HOH B 64 1264 65 HOH HOH . H 4 HOH B 65 1265 108 HOH HOH . H 4 HOH B 66 1266 144 HOH HOH . H 4 HOH B 67 1267 107 HOH HOH . H 4 HOH B 68 1268 214 HOH HOH . H 4 HOH B 69 1269 95 HOH HOH . H 4 HOH B 70 1270 145 HOH HOH . H 4 HOH B 71 1271 180 HOH HOH . H 4 HOH B 72 1272 183 HOH HOH . H 4 HOH B 73 1273 177 HOH HOH . H 4 HOH B 74 1274 200 HOH HOH . H 4 HOH B 75 1275 173 HOH HOH . H 4 HOH B 76 1276 206 HOH HOH . H 4 HOH B 77 1277 178 HOH HOH . H 4 HOH B 78 1278 89 HOH HOH . H 4 HOH B 79 1279 198 HOH HOH . H 4 HOH B 80 1280 72 HOH HOH . H 4 HOH B 81 1281 228 HOH HOH . H 4 HOH B 82 1282 114 HOH HOH . H 4 HOH B 83 1283 76 HOH HOH . H 4 HOH B 84 1284 130 HOH HOH . H 4 HOH B 85 1285 58 HOH HOH . H 4 HOH B 86 1286 189 HOH HOH . H 4 HOH B 87 1287 225 HOH HOH . H 4 HOH B 88 1288 240 HOH HOH . H 4 HOH B 89 1289 223 HOH HOH . H 4 HOH B 90 1290 94 HOH HOH . H 4 HOH B 91 1291 15 HOH HOH . H 4 HOH B 92 1292 129 HOH HOH . H 4 HOH B 93 1293 219 HOH HOH . H 4 HOH B 94 1294 196 HOH HOH . H 4 HOH B 95 1295 164 HOH HOH . H 4 HOH B 96 1296 188 HOH HOH . H 4 HOH B 97 1297 234 HOH HOH . H 4 HOH B 98 1298 171 HOH HOH . H 4 HOH B 99 1299 5 HOH HOH . H 4 HOH B 100 1300 9 HOH HOH . H 4 HOH B 101 1301 110 HOH HOH . H 4 HOH B 102 1302 184 HOH HOH . H 4 HOH B 103 1303 64 HOH HOH . H 4 HOH B 104 1304 151 HOH HOH . H 4 HOH B 105 1305 59 HOH HOH . H 4 HOH B 106 1306 88 HOH HOH . H 4 HOH B 107 1307 209 HOH HOH . H 4 HOH B 108 1308 215 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 11.555 _atom_site.Cartn_y -0.815 _atom_site.Cartn_z 28.272 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 702 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #