data_5H6G # _model_server_result.job_id j14dEVV6gkbKQPLRI1biLQ _model_server_result.datetime_utc '2024-10-19 06:43:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5h6g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":304}' # _entry.id 5H6G # _exptl.entry_id 5H6G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5H6G _cell.length_a 129.5 _cell.length_b 129.5 _cell.length_c 137.83 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5H6G _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,L 1 1 B,G,H,I,J,M 2 1 C,K,N 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 59 A CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf2 A SG CYS 225 A CYS 225 1_555 A SG CYS 260 A CYS 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 59 B CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? disulf ? disulf4 B SG CYS 225 B CYS 225 1_555 B SG CYS 260 B CYS 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? disulf ? disulf5 C SG CYS 22 C CYS 22 1_555 C SG CYS 59 C CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf6 C SG CYS 225 C CYS 225 1_555 C SG CYS 260 C CYS 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc1 B OD1 ASP 88 B ASP 88 1_555 G K K . B K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc2 B OD2 ASP 88 B ASP 88 1_555 G K K . B K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.484 ? metalc ? metalc3 B OD2 ASP 92 B ASP 92 1_555 G K K . B K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc4 G K K . B K 301 1_555 M O HOH . B HOH 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.411 ? metalc ? metalc5 G K K . B K 301 5_544 C OD1 ASP 88 C ASP 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc6 G K K . B K 301 5_544 C OD2 ASP 92 C ASP 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 273 n n P O2 PO4 sing 274 n n P O3 PO4 sing 275 n n P O4 PO4 sing 276 n n # _atom_sites.entry_id 5H6G _atom_sites.fract_transf_matrix[1][1] 0.007722 _atom_sites.fract_transf_matrix[1][2] 0.004458 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008917 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007255 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PO4 A 1 301 2 PO4 PO4 . E 3 CL A 1 302 1 CL CL . F 3 CL A 1 303 2 CL CL . G 4 K B 1 301 1 K K . H 2 PO4 B 1 302 1 PO4 PO4 . I 2 PO4 B 1 303 3 PO4 PO4 . J 2 PO4 B 1 304 4 PO4 PO4 . K 5 GOL C 1 301 1 GOL GOL . L 6 HOH A 1 401 73 HOH HOH . L 6 HOH A 2 402 44 HOH HOH . L 6 HOH A 3 403 10 HOH HOH . L 6 HOH A 4 404 102 HOH HOH . L 6 HOH A 5 405 29 HOH HOH . L 6 HOH A 6 406 41 HOH HOH . L 6 HOH A 7 407 76 HOH HOH . L 6 HOH A 8 408 8 HOH HOH . L 6 HOH A 9 409 13 HOH HOH . L 6 HOH A 10 410 25 HOH HOH . L 6 HOH A 11 411 62 HOH HOH . L 6 HOH A 12 412 90 HOH HOH . L 6 HOH A 13 413 40 HOH HOH . L 6 HOH A 14 414 49 HOH HOH . L 6 HOH A 15 415 70 HOH HOH . L 6 HOH A 16 416 12 HOH HOH . L 6 HOH A 17 417 67 HOH HOH . L 6 HOH A 18 418 101 HOH HOH . L 6 HOH A 19 419 46 HOH HOH . L 6 HOH A 20 420 23 HOH HOH . L 6 HOH A 21 421 20 HOH HOH . L 6 HOH A 22 422 2 HOH HOH . L 6 HOH A 23 423 69 HOH HOH . L 6 HOH A 24 424 11 HOH HOH . L 6 HOH A 25 425 35 HOH HOH . L 6 HOH A 26 426 74 HOH HOH . L 6 HOH A 27 427 22 HOH HOH . L 6 HOH A 28 428 43 HOH HOH . L 6 HOH A 29 429 48 HOH HOH . L 6 HOH A 30 430 66 HOH HOH . L 6 HOH A 31 431 104 HOH HOH . L 6 HOH A 32 432 107 HOH HOH . L 6 HOH A 33 433 17 HOH HOH . L 6 HOH A 34 434 3 HOH HOH . L 6 HOH A 35 435 105 HOH HOH . L 6 HOH A 36 436 86 HOH HOH . L 6 HOH A 37 437 78 HOH HOH . L 6 HOH A 38 438 75 HOH HOH . L 6 HOH A 39 439 109 HOH HOH . L 6 HOH A 40 440 89 HOH HOH . L 6 HOH A 41 441 63 HOH HOH . L 6 HOH A 42 442 33 HOH HOH . M 6 HOH B 1 401 91 HOH HOH . M 6 HOH B 2 402 88 HOH HOH . M 6 HOH B 3 403 96 HOH HOH . M 6 HOH B 4 404 7 HOH HOH . M 6 HOH B 5 405 85 HOH HOH . M 6 HOH B 6 406 71 HOH HOH . M 6 HOH B 7 407 45 HOH HOH . M 6 HOH B 8 408 4 HOH HOH . M 6 HOH B 9 409 24 HOH HOH . M 6 HOH B 10 410 6 HOH HOH . M 6 HOH B 11 411 60 HOH HOH . M 6 HOH B 12 412 39 HOH HOH . M 6 HOH B 13 413 79 HOH HOH . M 6 HOH B 14 414 14 HOH HOH . M 6 HOH B 15 415 103 HOH HOH . M 6 HOH B 16 416 38 HOH HOH . M 6 HOH B 17 417 50 HOH HOH . M 6 HOH B 18 418 80 HOH HOH . M 6 HOH B 19 419 82 HOH HOH . M 6 HOH B 20 420 27 HOH HOH . M 6 HOH B 21 421 26 HOH HOH . M 6 HOH B 22 422 64 HOH HOH . M 6 HOH B 23 423 81 HOH HOH . M 6 HOH B 24 424 57 HOH HOH . M 6 HOH B 25 425 37 HOH HOH . M 6 HOH B 26 426 19 HOH HOH . M 6 HOH B 27 427 72 HOH HOH . M 6 HOH B 28 428 59 HOH HOH . M 6 HOH B 29 429 83 HOH HOH . M 6 HOH B 30 430 32 HOH HOH . M 6 HOH B 31 431 21 HOH HOH . M 6 HOH B 32 432 1 HOH HOH . M 6 HOH B 33 433 58 HOH HOH . M 6 HOH B 34 434 106 HOH HOH . M 6 HOH B 35 435 28 HOH HOH . M 6 HOH B 36 436 84 HOH HOH . M 6 HOH B 37 437 77 HOH HOH . M 6 HOH B 38 438 42 HOH HOH . M 6 HOH B 39 439 68 HOH HOH . M 6 HOH B 40 440 110 HOH HOH . M 6 HOH B 41 441 47 HOH HOH . M 6 HOH B 42 442 56 HOH HOH . M 6 HOH B 43 443 61 HOH HOH . M 6 HOH B 44 444 65 HOH HOH . M 6 HOH B 45 445 98 HOH HOH . M 6 HOH B 46 446 100 HOH HOH . M 6 HOH B 47 447 97 HOH HOH . M 6 HOH B 48 448 99 HOH HOH . N 6 HOH C 1 401 31 HOH HOH . N 6 HOH C 2 402 15 HOH HOH . N 6 HOH C 3 403 30 HOH HOH . N 6 HOH C 4 404 5 HOH HOH . N 6 HOH C 5 405 53 HOH HOH . N 6 HOH C 6 406 18 HOH HOH . N 6 HOH C 7 407 94 HOH HOH . N 6 HOH C 8 408 87 HOH HOH . N 6 HOH C 9 409 95 HOH HOH . N 6 HOH C 10 410 54 HOH HOH . N 6 HOH C 11 411 108 HOH HOH . N 6 HOH C 12 412 9 HOH HOH . N 6 HOH C 13 413 55 HOH HOH . N 6 HOH C 14 414 34 HOH HOH . N 6 HOH C 15 415 52 HOH HOH . N 6 HOH C 16 416 36 HOH HOH . N 6 HOH C 17 417 92 HOH HOH . N 6 HOH C 18 418 51 HOH HOH . N 6 HOH C 19 419 16 HOH HOH . N 6 HOH C 20 420 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . J 2 -12.846 -46.064 -24.014 1 72.27 ? P PO4 304 B 1 HETATM 2 O O1 PO4 . . . J 2 -12.055 -45.628 -25.238 1 60.74 ? O1 PO4 304 B 1 HETATM 3 O O2 PO4 . . . J 2 -14.337 -45.828 -24.247 1 65.69 ? O2 PO4 304 B 1 HETATM 4 O O3 PO4 . . . J 2 -12.614 -47.541 -23.782 1 69.49 ? O3 PO4 304 B 1 HETATM 5 O O4 PO4 . . . J 2 -12.35 -45.269 -22.81 1 66.25 ? O4 PO4 304 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #