data_5H73 # _model_server_result.job_id cs591AiVFXPLEASvUETZAQ _model_server_result.datetime_utc '2024-11-22 22:28:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5h73 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5H73 # _exptl.entry_id 5H73 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5H73 _cell.length_a 90.891 _cell.length_b 90.891 _cell.length_c 123.348 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5H73 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 106 n n N1 C10 FMN doub 107 n n C2 O2 FMN doub 108 n n C2 N3 FMN sing 109 n n N3 C4 FMN sing 110 n n N3 HN3 FMN sing 111 n n C4 O4 FMN doub 112 n n C4 C4A FMN sing 113 n n C4A N5 FMN doub 114 n n C4A C10 FMN sing 115 n n N5 C5A FMN sing 116 n n C5A C6 FMN doub 117 n y C5A C9A FMN sing 118 n y C6 C7 FMN sing 119 n y C6 H6 FMN sing 120 n n C7 C7M FMN sing 121 n n C7 C8 FMN doub 122 n y C7M HM71 FMN sing 123 n n C7M HM72 FMN sing 124 n n C7M HM73 FMN sing 125 n n C8 C8M FMN sing 126 n n C8 C9 FMN sing 127 n y C8M HM81 FMN sing 128 n n C8M HM82 FMN sing 129 n n C8M HM83 FMN sing 130 n n C9 C9A FMN doub 131 n y C9 H9 FMN sing 132 n n C9A N10 FMN sing 133 n n N10 C10 FMN sing 134 n n N10 C1' FMN sing 135 n n C1' C2' FMN sing 136 n n C1' "H1'1" FMN sing 137 n n C1' "H1'2" FMN sing 138 n n C2' O2' FMN sing 139 n n C2' C3' FMN sing 140 n n C2' H2' FMN sing 141 n n O2' HO2' FMN sing 142 n n C3' O3' FMN sing 143 n n C3' C4' FMN sing 144 n n C3' H3' FMN sing 145 n n O3' HO3' FMN sing 146 n n C4' O4' FMN sing 147 n n C4' C5' FMN sing 148 n n C4' H4' FMN sing 149 n n O4' HO4' FMN sing 150 n n C5' O5' FMN sing 151 n n C5' "H5'1" FMN sing 152 n n C5' "H5'2" FMN sing 153 n n O5' P FMN sing 154 n n P O1P FMN doub 155 n n P O2P FMN sing 156 n n P O3P FMN sing 157 n n O2P HOP2 FMN sing 158 n n O3P HOP3 FMN sing 159 n n # _atom_sites.entry_id 5H73 _atom_sites.fract_transf_matrix[1][1] 0.011002 _atom_sites.fract_transf_matrix[1][2] 0.006352 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012704 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008107 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7L7 A 1 401 1 7L7 18F . C 3 FMN A 1 402 1 FMN FMN . D 4 ORO A 1 403 1 ORO ORO . E 5 SO4 A 1 404 2 SO4 SO4 . F 5 SO4 A 1 405 3 SO4 SO4 . G 6 ACT A 1 406 1 ACT ACT . H 6 ACT A 1 407 2 ACT ACT . I 6 ACT A 1 408 3 ACT ACT . J 6 ACT A 1 409 4 ACT ACT . K 7 HOH A 1 501 185 HOH HOH . K 7 HOH A 2 502 181 HOH HOH . K 7 HOH A 3 503 127 HOH HOH . K 7 HOH A 4 504 128 HOH HOH . K 7 HOH A 5 505 94 HOH HOH . K 7 HOH A 6 506 114 HOH HOH . K 7 HOH A 7 507 76 HOH HOH . K 7 HOH A 8 508 42 HOH HOH . K 7 HOH A 9 509 104 HOH HOH . K 7 HOH A 10 510 27 HOH HOH . K 7 HOH A 11 511 180 HOH HOH . K 7 HOH A 12 512 35 HOH HOH . K 7 HOH A 13 513 59 HOH HOH . K 7 HOH A 14 514 150 HOH HOH . K 7 HOH A 15 515 132 HOH HOH . K 7 HOH A 16 516 118 HOH HOH . K 7 HOH A 17 517 8 HOH HOH . K 7 HOH A 18 518 48 HOH HOH . K 7 HOH A 19 519 250 HOH HOH . K 7 HOH A 20 520 13 HOH HOH . K 7 HOH A 21 521 66 HOH HOH . K 7 HOH A 22 522 71 HOH HOH . K 7 HOH A 23 523 239 HOH HOH . K 7 HOH A 24 524 85 HOH HOH . K 7 HOH A 25 525 95 HOH HOH . K 7 HOH A 26 526 50 HOH HOH . K 7 HOH A 27 527 240 HOH HOH . K 7 HOH A 28 528 28 HOH HOH . K 7 HOH A 29 529 90 HOH HOH . K 7 HOH A 30 530 68 HOH HOH . K 7 HOH A 31 531 24 HOH HOH . K 7 HOH A 32 532 16 HOH HOH . K 7 HOH A 33 533 67 HOH HOH . K 7 HOH A 34 534 86 HOH HOH . K 7 HOH A 35 535 75 HOH HOH . K 7 HOH A 36 536 47 HOH HOH . K 7 HOH A 37 537 9 HOH HOH . K 7 HOH A 38 538 143 HOH HOH . K 7 HOH A 39 539 45 HOH HOH . K 7 HOH A 40 540 12 HOH HOH . K 7 HOH A 41 541 62 HOH HOH . K 7 HOH A 42 542 158 HOH HOH . K 7 HOH A 43 543 106 HOH HOH . K 7 HOH A 44 544 238 HOH HOH . K 7 HOH A 45 545 253 HOH HOH . K 7 HOH A 46 546 54 HOH HOH . K 7 HOH A 47 547 126 HOH HOH . K 7 HOH A 48 548 36 HOH HOH . K 7 HOH A 49 549 60 HOH HOH . K 7 HOH A 50 550 83 HOH HOH . K 7 HOH A 51 551 116 HOH HOH . K 7 HOH A 52 552 15 HOH HOH . K 7 HOH A 53 553 84 HOH HOH . K 7 HOH A 54 554 124 HOH HOH . K 7 HOH A 55 555 77 HOH HOH . K 7 HOH A 56 556 88 HOH HOH . K 7 HOH A 57 557 49 HOH HOH . K 7 HOH A 58 558 40 HOH HOH . K 7 HOH A 59 559 110 HOH HOH . K 7 HOH A 60 560 58 HOH HOH . K 7 HOH A 61 561 138 HOH HOH . K 7 HOH A 62 562 61 HOH HOH . K 7 HOH A 63 563 100 HOH HOH . K 7 HOH A 64 564 108 HOH HOH . K 7 HOH A 65 565 33 HOH HOH . K 7 HOH A 66 566 20 HOH HOH . K 7 HOH A 67 567 43 HOH HOH . K 7 HOH A 68 568 46 HOH HOH . K 7 HOH A 69 569 107 HOH HOH . K 7 HOH A 70 570 247 HOH HOH . K 7 HOH A 71 571 52 HOH HOH . K 7 HOH A 72 572 23 HOH HOH . K 7 HOH A 73 573 170 HOH HOH . K 7 HOH A 74 574 21 HOH HOH . K 7 HOH A 75 575 39 HOH HOH . K 7 HOH A 76 576 5 HOH HOH . K 7 HOH A 77 577 55 HOH HOH . K 7 HOH A 78 578 11 HOH HOH . K 7 HOH A 79 579 63 HOH HOH . K 7 HOH A 80 580 70 HOH HOH . K 7 HOH A 81 581 56 HOH HOH . K 7 HOH A 82 582 80 HOH HOH . K 7 HOH A 83 583 29 HOH HOH . K 7 HOH A 84 584 18 HOH HOH . K 7 HOH A 85 585 32 HOH HOH . K 7 HOH A 86 586 123 HOH HOH . K 7 HOH A 87 587 1 HOH HOH . K 7 HOH A 88 588 74 HOH HOH . K 7 HOH A 89 589 81 HOH HOH . K 7 HOH A 90 590 6 HOH HOH . K 7 HOH A 91 591 17 HOH HOH . K 7 HOH A 92 592 99 HOH HOH . K 7 HOH A 93 593 157 HOH HOH . K 7 HOH A 94 594 146 HOH HOH . K 7 HOH A 95 595 38 HOH HOH . K 7 HOH A 96 596 109 HOH HOH . K 7 HOH A 97 597 130 HOH HOH . K 7 HOH A 98 598 14 HOH HOH . K 7 HOH A 99 599 31 HOH HOH . K 7 HOH A 100 600 10 HOH HOH . K 7 HOH A 101 601 78 HOH HOH . K 7 HOH A 102 602 44 HOH HOH . K 7 HOH A 103 603 51 HOH HOH . K 7 HOH A 104 604 7 HOH HOH . K 7 HOH A 105 605 112 HOH HOH . K 7 HOH A 106 606 25 HOH HOH . K 7 HOH A 107 607 241 HOH HOH . K 7 HOH A 108 608 102 HOH HOH . K 7 HOH A 109 609 103 HOH HOH . K 7 HOH A 110 610 69 HOH HOH . K 7 HOH A 111 611 105 HOH HOH . K 7 HOH A 112 612 209 HOH HOH . K 7 HOH A 113 613 79 HOH HOH . K 7 HOH A 114 614 57 HOH HOH . K 7 HOH A 115 615 19 HOH HOH . K 7 HOH A 116 616 34 HOH HOH . K 7 HOH A 117 617 176 HOH HOH . K 7 HOH A 118 618 91 HOH HOH . K 7 HOH A 119 619 22 HOH HOH . K 7 HOH A 120 620 135 HOH HOH . K 7 HOH A 121 621 53 HOH HOH . K 7 HOH A 122 622 30 HOH HOH . K 7 HOH A 123 623 145 HOH HOH . K 7 HOH A 124 624 156 HOH HOH . K 7 HOH A 125 625 252 HOH HOH . K 7 HOH A 126 626 101 HOH HOH . K 7 HOH A 127 627 129 HOH HOH . K 7 HOH A 128 628 65 HOH HOH . K 7 HOH A 129 629 115 HOH HOH . K 7 HOH A 130 630 148 HOH HOH . K 7 HOH A 131 631 251 HOH HOH . K 7 HOH A 132 632 237 HOH HOH . K 7 HOH A 133 633 97 HOH HOH . K 7 HOH A 134 634 227 HOH HOH . K 7 HOH A 135 635 235 HOH HOH . K 7 HOH A 136 636 26 HOH HOH . K 7 HOH A 137 637 41 HOH HOH . K 7 HOH A 138 638 234 HOH HOH . K 7 HOH A 139 639 245 HOH HOH . K 7 HOH A 140 640 119 HOH HOH . K 7 HOH A 141 641 228 HOH HOH . K 7 HOH A 142 642 246 HOH HOH . K 7 HOH A 143 643 93 HOH HOH . K 7 HOH A 144 644 87 HOH HOH . K 7 HOH A 145 645 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . C 3 -35.044 -24.335 -8.802 1 17.35 ? N1 FMN 402 A 1 HETATM 2 C C2 FMN . . . C 3 -35.713 -24.383 -9.896 1 17.43 ? C2 FMN 402 A 1 HETATM 3 O O2 FMN . . . C 3 -35.359 -24.765 -10.964 1 19.49 ? O2 FMN 402 A 1 HETATM 4 N N3 FMN . . . C 3 -37.025 -23.752 -9.855 1 18.04 ? N3 FMN 402 A 1 HETATM 5 C C4 FMN . . . C 3 -37.486 -23.291 -8.768 1 18.88 ? C4 FMN 402 A 1 HETATM 6 O O4 FMN . . . C 3 -38.743 -22.719 -8.779 1 18.69 ? O4 FMN 402 A 1 HETATM 7 C C4A FMN . . . C 3 -36.842 -23.258 -7.517 1 17.35 ? C4A FMN 402 A 1 HETATM 8 N N5 FMN . . . C 3 -37.308 -22.882 -6.294 1 18.67 ? N5 FMN 402 A 1 HETATM 9 C C5A FMN . . . C 3 -36.548 -22.787 -5.21 1 17.75 ? C5A FMN 402 A 1 HETATM 10 C C6 FMN . . . C 3 -36.942 -22.298 -4.031 1 18.14 ? C6 FMN 402 A 1 HETATM 11 C C7 FMN . . . C 3 -36.174 -22.249 -2.917 1 18.73 ? C7 FMN 402 A 1 HETATM 12 C C7M FMN . . . C 3 -36.644 -21.664 -1.641 1 20.86 ? C7M FMN 402 A 1 HETATM 13 C C8 FMN . . . C 3 -34.811 -22.758 -2.959 1 16.42 ? C8 FMN 402 A 1 HETATM 14 C C8M FMN . . . C 3 -33.876 -22.679 -1.79 1 19.25 ? C8M FMN 402 A 1 HETATM 15 C C9 FMN . . . C 3 -34.404 -23.252 -4.154 1 16.8 ? C9 FMN 402 A 1 HETATM 16 C C9A FMN . . . C 3 -35.153 -23.369 -5.311 1 17 ? C9A FMN 402 A 1 HETATM 17 N N10 FMN . . . C 3 -34.728 -23.888 -6.52 1 17.21 ? N10 FMN 402 A 1 HETATM 18 C C10 FMN . . . C 3 -35.452 -23.908 -7.648 1 16.15 ? C10 FMN 402 A 1 HETATM 19 C C1' FMN . . . C 3 -33.354 -24.504 -6.616 1 16.95 ? C1' FMN 402 A 1 HETATM 20 C C2' FMN . . . C 3 -32.284 -23.474 -6.794 1 16.55 ? C2' FMN 402 A 1 HETATM 21 O O2' FMN . . . C 3 -32.373 -22.869 -8.047 1 17.51 ? O2' FMN 402 A 1 HETATM 22 C C3' FMN . . . C 3 -30.889 -24.163 -6.72 1 16.48 ? C3' FMN 402 A 1 HETATM 23 O O3' FMN . . . C 3 -30.844 -25.147 -7.775 1 17.66 ? O3' FMN 402 A 1 HETATM 24 C C4' FMN . . . C 3 -30.652 -24.847 -5.339 1 16.95 ? C4' FMN 402 A 1 HETATM 25 O O4' FMN . . . C 3 -31.219 -24.204 -4.249 1 17.64 ? O4' FMN 402 A 1 HETATM 26 C C5' FMN . . . C 3 -29.113 -25.002 -5.084 1 16.44 ? C5' FMN 402 A 1 HETATM 27 O O5' FMN . . . C 3 -28.449 -23.726 -4.996 1 16.41 ? O5' FMN 402 A 1 HETATM 28 P P FMN . . . C 3 -28.147 -23.06 -3.6 1 17.6 ? P FMN 402 A 1 HETATM 29 O O1P FMN . . . C 3 -29.47 -22.511 -3.06 1 18.48 ? O1P FMN 402 A 1 HETATM 30 O O2P FMN . . . C 3 -27.202 -21.915 -3.959 1 16.74 ? O2P FMN 402 A 1 HETATM 31 O O3P FMN . . . C 3 -27.511 -24.085 -2.683 1 18.72 ? O3P FMN 402 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #