data_5H75
#
_model_server_result.job_id            7Q75veYTIak5b5hYmF-wQg 
_model_server_result.datetime_utc      '2024-10-12 12:22:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5h75 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":301}' 
#
_entry.id    5H75 
#
_exptl.entry_id    5H75 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5H75 
_cell.length_a            167.729 
_cell.length_b            167.729 
_cell.length_c            167.729 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5H75 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        198 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 
3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     5H75 
_atom_sites.fract_transf_matrix[1][1]    0.005962 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005962 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005962 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 301 1 FAD FAD . 
F 2 FAD B 1 301 2 FAD FAD . 
G 2 FAD C 1 301 3 FAD FAD . 
H 2 FAD D 1 301 4 FAD FAD . 
I 3 HOH B 1 401 8 HOH HOH . 
J 3 HOH C 1 401 2 HOH HOH . 
J 3 HOH C 2 402 11 HOH HOH . 
J 3 HOH C 3 403 10 HOH HOH . 
J 3 HOH C 4 404 4 HOH HOH . 
J 3 HOH C 5 405 9 HOH HOH . 
K 3 HOH D 1 401 7 HOH HOH . 
K 3 HOH D 2 402 6 HOH HOH . 
K 3 HOH D 3 403 5 HOH HOH . 
K 3 HOH D 4 404 1 HOH HOH . 
K 3 HOH D 5 405 3 HOH HOH . 
K 3 HOH D 6 406 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . F 2 -15.354 12.378 13.127 1 139.8 ? PA FAD 301 B 1 
HETATM 2 O O1A FAD . . . F 2 -16.417 12.678 14.157 1 135.8 -1 O1A FAD 301 B 1 
HETATM 3 O O2A FAD . . . F 2 -14.032 13.107 13.175 1 119.91 ? O2A FAD 301 B 1 
HETATM 4 O O5B FAD . . . F 2 -15.057 10.796 13.156 1 202.9 ? O5B FAD 301 B 1 
HETATM 5 C C5B FAD . . . F 2 -14.138 10.248 14.099 1 209.72 ? C5B FAD 301 B 1 
HETATM 6 C C4B FAD . . . F 2 -12.858 9.841 13.381 1 213.13 ? C4B FAD 301 B 1 
HETATM 7 O O4B FAD . . . F 2 -11.764 9.848 14.303 1 219.1 ? O4B FAD 301 B 1 
HETATM 8 C C3B FAD . . . F 2 -12.972 8.439 12.802 1 210.96 ? C3B FAD 301 B 1 
HETATM 9 O O3B FAD . . . F 2 -12.867 8.495 11.373 1 211.16 ? O3B FAD 301 B 1 
HETATM 10 C C2B FAD . . . F 2 -11.858 7.623 13.444 1 214.6 ? C2B FAD 301 B 1 
HETATM 11 O O2B FAD . . . F 2 -10.94 7.084 12.484 1 211.89 ? O2B FAD 301 B 1 
HETATM 12 C C1B FAD . . . F 2 -11.123 8.572 14.379 1 222.74 ? C1B FAD 301 B 1 
HETATM 13 N N9A FAD . . . F 2 -11.194 8.059 15.77 1 228.51 ? N9A FAD 301 B 1 
HETATM 14 C C8A FAD . . . F 2 -11.243 6.762 16.129 1 227.9 ? C8A FAD 301 B 1 
HETATM 15 N N7A FAD . . . F 2 -11.301 6.629 17.479 1 228.55 ? N7A FAD 301 B 1 
HETATM 16 C C5A FAD . . . F 2 -11.29 7.866 18.007 1 228.72 ? C5A FAD 301 B 1 
HETATM 17 C C6A FAD . . . F 2 -11.33 8.445 19.371 1 226.85 ? C6A FAD 301 B 1 
HETATM 18 N N6A FAD . . . F 2 -11.396 7.652 20.468 1 226.16 ? N6A FAD 301 B 1 
HETATM 19 N N1A FAD . . . F 2 -11.299 9.791 19.484 1 225.13 ? N1A FAD 301 B 1 
HETATM 20 C C2A FAD . . . F 2 -11.234 10.591 18.402 1 223.81 ? C2A FAD 301 B 1 
HETATM 21 N N3A FAD . . . F 2 -11.194 10.134 17.138 1 225.15 ? N3A FAD 301 B 1 
HETATM 22 C C4A FAD . . . F 2 -11.219 8.805 16.877 1 227.99 ? C4A FAD 301 B 1 
HETATM 23 N N1 FAD . . . F 2 -21.933 9.448 7.705 1 151.94 ? N1 FAD 301 B 1 
HETATM 24 C C2 FAD . . . F 2 -23.262 9.698 7.59 1 146.2 ? C2 FAD 301 B 1 
HETATM 25 O O2 FAD . . . F 2 -23.924 9.91 8.629 1 134.53 ? O2 FAD 301 B 1 
HETATM 26 N N3 FAD . . . F 2 -23.896 9.727 6.404 1 154.09 ? N3 FAD 301 B 1 
HETATM 27 C C4 FAD . . . F 2 -23.259 9.511 5.247 1 158.12 ? C4 FAD 301 B 1 
HETATM 28 O O4 FAD . . . F 2 -23.876 9.545 4.161 1 157.77 ? O4 FAD 301 B 1 
HETATM 29 C C4X FAD . . . F 2 -21.803 9.23 5.284 1 157.5 ? C4X FAD 301 B 1 
HETATM 30 N N5 FAD . . . F 2 -21.086 9.001 4.162 1 153.65 ? N5 FAD 301 B 1 
HETATM 31 C C5X FAD . . . F 2 -19.759 8.747 4.228 1 151.74 ? C5X FAD 301 B 1 
HETATM 32 C C6 FAD . . . F 2 -19.042 8.514 3.06 1 148.25 ? C6 FAD 301 B 1 
HETATM 33 C C7 FAD . . . F 2 -17.678 8.253 3.119 1 142.18 ? C7 FAD 301 B 1 
HETATM 34 C C7M FAD . . . F 2 -16.905 8.001 1.852 1 146.41 ? C7M FAD 301 B 1 
HETATM 35 C C8 FAD . . . F 2 -16.981 8.221 4.433 1 138.77 ? C8 FAD 301 B 1 
HETATM 36 C C8M FAD . . . F 2 -15.504 7.938 4.494 1 135.07 ? C8M FAD 301 B 1 
HETATM 37 C C9 FAD . . . F 2 -17.694 8.453 5.603 1 149.5 ? C9 FAD 301 B 1 
HETATM 38 C C9A FAD . . . F 2 -19.058 8.715 5.544 1 156.45 ? C9A FAD 301 B 1 
HETATM 39 N N10 FAD . . . F 2 -19.787 8.951 6.726 1 153.7 ? N10 FAD 301 B 1 
HETATM 40 C C10 FAD . . . F 2 -21.166 9.212 6.62 1 154.83 ? C10 FAD 301 B 1 
HETATM 41 C C1' FAD . . . F 2 -19.127 8.926 8.033 1 138.85 ? C1' FAD 301 B 1 
HETATM 42 C C2' FAD . . . F 2 -19.227 7.526 8.627 1 147.42 ? C2' FAD 301 B 1 
HETATM 43 O O2' FAD . . . F 2 -20.505 6.964 8.308 1 153.53 ? O2' FAD 301 B 1 
HETATM 44 C C3' FAD . . . F 2 -19.05 7.56 10.14 1 141.86 ? C3' FAD 301 B 1 
HETATM 45 O O3' FAD . . . F 2 -20.289 7.928 10.757 1 156.53 ? O3' FAD 301 B 1 
HETATM 46 C C4' FAD . . . F 2 -17.968 8.555 10.541 1 119.84 ? C4' FAD 301 B 1 
HETATM 47 O O4' FAD . . . F 2 -17.293 8.08 11.712 1 105.55 ? O4' FAD 301 B 1 
HETATM 48 C C5' FAD . . . F 2 -18.565 9.929 10.822 1 113.67 ? C5' FAD 301 B 1 
HETATM 49 O O5' FAD . . . F 2 -17.646 10.698 11.595 1 107.18 ? O5' FAD 301 B 1 
HETATM 50 P P FAD . . . F 2 -17.555 12.294 11.405 1 108.07 ? P FAD 301 B 1 
HETATM 51 O O1P FAD . . . F 2 -17.863 12.616 9.963 1 121.06 -1 O1P FAD 301 B 1 
HETATM 52 O O2P FAD . . . F 2 -18.35 12.947 12.51 1 111.6 ? O2P FAD 301 B 1 
HETATM 53 O O3P FAD . . . F 2 -15.994 12.59 11.665 1 136.61 ? O3P FAD 301 B 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           53 
#