data_5H86
#
_model_server_result.job_id            HN8Kat5Vi-Up0fnn29-rnw 
_model_server_result.datetime_utc      '2024-11-28 18:29:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5h86 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    5H86 
#
_exptl.entry_id    5H86 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              837.624 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'Butyryl Coenzyme A' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5H86 
_cell.length_a            38.246 
_cell.length_b            38.246 
_cell.length_c            186.965 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5H86 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C25 H42 N7 O17 P3 S' 
_chem_comp.formula_weight    837.624 
_chem_comp.id                BCO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'Butyryl Coenzyme A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'S-{(3S,5S,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} butanethioate (non-preferred name)' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C15 N4 BCO doub 70 n y 
C15 N3 BCO sing 71 n y 
N4 C12 BCO sing 72 n y 
N3 C6 BCO doub 73 n y 
O9 P1 BCO doub 74 n n 
C12 N5 BCO sing 75 n n 
C12 C8 BCO doub 76 n y 
O3 C2 BCO sing 77 n n 
C6 C8 BCO sing 78 n y 
C6 N1 BCO sing 79 n y 
C2 C4 BCO sing 80 n n 
C2 C1 BCO sing 81 n n 
C8 N2 BCO sing 82 n y 
P1 O6 BCO sing 83 n n 
P1 O5 BCO sing 84 n n 
P1 O2 BCO sing 85 n n 
C4 N1 BCO sing 86 n n 
C4 O1 BCO sing 87 n n 
N1 C7 BCO sing 88 n y 
O2 C1 BCO sing 89 n n 
C1 C3 BCO sing 90 n n 
N2 C7 BCO doub 91 n y 
O1 C3 BCO sing 92 n n 
C3 C5 BCO sing 93 n n 
C5 O4 BCO sing 94 n n 
O4 P2 BCO sing 95 n n 
O10 P2 BCO doub 96 n n 
P2 O7 BCO sing 97 n n 
P2 O12 BCO sing 98 n n 
O7 P3 BCO sing 99 n n 
P3 O13 BCO doub 100 n n 
P3 O14 BCO sing 101 n n 
P3 O8 BCO sing 102 n n 
O8 C11 BCO sing 103 n n 
C14 C9 BCO sing 104 n n 
C11 C9 BCO sing 105 n n 
C9 C13 BCO sing 106 n n 
C9 C10 BCO sing 107 n n 
C10 O11 BCO sing 108 n n 
C10 C16 BCO sing 109 n n 
C16 O15 BCO doub 110 n n 
C16 N6 BCO sing 111 n n 
N6 C17 BCO sing 112 n n 
C17 C18 BCO sing 113 n n 
C18 C19 BCO sing 114 n n 
C19 O16 BCO doub 115 n n 
C19 N7 BCO sing 116 n n 
N7 C20 BCO sing 117 n n 
C20 C21 BCO sing 118 n n 
C21 S1 BCO sing 119 n n 
S1 C22 BCO sing 120 n n 
C22 O17 BCO doub 121 n n 
C22 C23 BCO sing 122 n n 
C23 C24 BCO sing 123 n n 
C24 C25 BCO sing 124 n n 
O5 H1 BCO sing 125 n n 
O6 H2 BCO sing 126 n n 
C1 H3 BCO sing 127 n n 
C2 H4 BCO sing 128 n n 
O3 H5 BCO sing 129 n n 
C4 H6 BCO sing 130 n n 
C7 H7 BCO sing 131 n n 
C15 H8 BCO sing 132 n n 
N5 H9 BCO sing 133 n n 
N5 H10 BCO sing 134 n n 
C3 H11 BCO sing 135 n n 
C5 H12 BCO sing 136 n n 
C5 H13 BCO sing 137 n n 
O12 H14 BCO sing 138 n n 
O14 H15 BCO sing 139 n n 
C11 H16 BCO sing 140 n n 
C11 H17 BCO sing 141 n n 
C13 H18 BCO sing 142 n n 
C13 H19 BCO sing 143 n n 
C13 H20 BCO sing 144 n n 
C14 H21 BCO sing 145 n n 
C14 H22 BCO sing 146 n n 
C14 H23 BCO sing 147 n n 
C10 H24 BCO sing 148 n n 
O11 H25 BCO sing 149 n n 
N6 H26 BCO sing 150 n n 
C17 H27 BCO sing 151 n n 
C18 H28 BCO sing 152 n n 
N7 H29 BCO sing 153 n n 
C20 H30 BCO sing 154 n n 
C20 H31 BCO sing 155 n n 
C21 H32 BCO sing 156 n n 
C21 H33 BCO sing 157 n n 
C23 H34 BCO sing 158 n n 
C24 H35 BCO sing 159 n n 
C25 H36 BCO sing 160 n n 
C25 H37 BCO sing 161 n n 
C25 H38 BCO sing 162 n n 
C17 H39 BCO sing 163 n n 
C18 H40 BCO sing 164 n n 
C23 H41 BCO sing 165 n n 
C24 H42 BCO sing 166 n n 
#
_atom_sites.entry_id                     5H86 
_atom_sites.fract_transf_matrix[1][1]    0.026147 
_atom_sites.fract_transf_matrix[1][2]    0.015096 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.030191 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005349 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BCO A 1 201 1 BCO BCO . 
C 3 EDO A 1 202 2 EDO EDO . 
D 4 HOH A 1 301 20 HOH HOH . 
D 4 HOH A 2 302 28 HOH HOH . 
D 4 HOH A 3 303 54 HOH HOH . 
D 4 HOH A 4 304 44 HOH HOH . 
D 4 HOH A 5 305 76 HOH HOH . 
D 4 HOH A 6 306 53 HOH HOH . 
D 4 HOH A 7 307 31 HOH HOH . 
D 4 HOH A 8 308 27 HOH HOH . 
D 4 HOH A 9 309 51 HOH HOH . 
D 4 HOH A 10 310 37 HOH HOH . 
D 4 HOH A 11 311 42 HOH HOH . 
D 4 HOH A 12 312 50 HOH HOH . 
D 4 HOH A 13 313 22 HOH HOH . 
D 4 HOH A 14 314 65 HOH HOH . 
D 4 HOH A 15 315 69 HOH HOH . 
D 4 HOH A 16 316 64 HOH HOH . 
D 4 HOH A 17 317 12 HOH HOH . 
D 4 HOH A 18 318 30 HOH HOH . 
D 4 HOH A 19 319 7 HOH HOH . 
D 4 HOH A 20 320 10 HOH HOH . 
D 4 HOH A 21 321 59 HOH HOH . 
D 4 HOH A 22 322 47 HOH HOH . 
D 4 HOH A 23 323 19 HOH HOH . 
D 4 HOH A 24 324 39 HOH HOH . 
D 4 HOH A 25 325 61 HOH HOH . 
D 4 HOH A 26 326 73 HOH HOH . 
D 4 HOH A 27 327 68 HOH HOH . 
D 4 HOH A 28 328 9 HOH HOH . 
D 4 HOH A 29 329 86 HOH HOH . 
D 4 HOH A 30 330 3 HOH HOH . 
D 4 HOH A 31 331 63 HOH HOH . 
D 4 HOH A 32 332 13 HOH HOH . 
D 4 HOH A 33 333 1 HOH HOH . 
D 4 HOH A 34 334 6 HOH HOH . 
D 4 HOH A 35 335 4 HOH HOH . 
D 4 HOH A 36 336 84 HOH HOH . 
D 4 HOH A 37 337 15 HOH HOH . 
D 4 HOH A 38 338 24 HOH HOH . 
D 4 HOH A 39 339 45 HOH HOH . 
D 4 HOH A 40 340 80 HOH HOH . 
D 4 HOH A 41 341 35 HOH HOH . 
D 4 HOH A 42 342 56 HOH HOH . 
D 4 HOH A 43 343 5 HOH HOH . 
D 4 HOH A 44 344 36 HOH HOH . 
D 4 HOH A 45 345 11 HOH HOH . 
D 4 HOH A 46 346 48 HOH HOH . 
D 4 HOH A 47 347 82 HOH HOH . 
D 4 HOH A 48 348 17 HOH HOH . 
D 4 HOH A 49 349 71 HOH HOH . 
D 4 HOH A 50 350 41 HOH HOH . 
D 4 HOH A 51 351 43 HOH HOH . 
D 4 HOH A 52 352 58 HOH HOH . 
D 4 HOH A 53 353 78 HOH HOH . 
D 4 HOH A 54 354 81 HOH HOH . 
D 4 HOH A 55 355 8 HOH HOH . 
D 4 HOH A 56 356 75 HOH HOH . 
D 4 HOH A 57 357 60 HOH HOH . 
D 4 HOH A 58 358 85 HOH HOH . 
D 4 HOH A 59 359 77 HOH HOH . 
D 4 HOH A 60 360 16 HOH HOH . 
D 4 HOH A 61 361 66 HOH HOH . 
D 4 HOH A 62 362 57 HOH HOH . 
D 4 HOH A 63 363 23 HOH HOH . 
D 4 HOH A 64 364 21 HOH HOH . 
D 4 HOH A 65 365 62 HOH HOH . 
D 4 HOH A 66 366 67 HOH HOH . 
D 4 HOH A 67 367 14 HOH HOH . 
D 4 HOH A 68 368 33 HOH HOH . 
D 4 HOH A 69 369 83 HOH HOH . 
D 4 HOH A 70 370 29 HOH HOH . 
D 4 HOH A 71 371 46 HOH HOH . 
D 4 HOH A 72 372 55 HOH HOH . 
D 4 HOH A 73 373 88 HOH HOH . 
D 4 HOH A 74 374 18 HOH HOH . 
D 4 HOH A 75 375 34 HOH HOH . 
D 4 HOH A 76 376 87 HOH HOH . 
D 4 HOH A 77 377 52 HOH HOH . 
D 4 HOH A 78 378 79 HOH HOH . 
D 4 HOH A 79 379 32 HOH HOH . 
D 4 HOH A 80 380 72 HOH HOH . 
D 4 HOH A 81 381 26 HOH HOH . 
D 4 HOH A 82 382 2 HOH HOH . 
D 4 HOH A 83 383 49 HOH HOH . 
D 4 HOH A 84 384 74 HOH HOH . 
D 4 HOH A 85 385 70 HOH HOH . 
D 4 HOH A 86 386 38 HOH HOH . 
D 4 HOH A 87 387 25 HOH HOH . 
D 4 HOH A 88 388 40 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O9 BCO . . . B 2 8.995 3.318 15.704 1 20 ? O9 BCO 201 A 1 
HETATM 2 P P1 BCO . . . B 2 7.829 2.461 15.294 1 20 ? P1 BCO 201 A 1 
HETATM 3 O O5 BCO . . . B 2 7.063 1.871 16.447 1 20 ? O5 BCO 201 A 1 
HETATM 4 O O6 BCO . . . B 2 8.136 1.483 14.194 1 20 ? O6 BCO 201 A 1 
HETATM 5 O O2 BCO . . . B 2 6.815 3.52 14.624 1 20 ? O2 BCO 201 A 1 
HETATM 6 C C1 BCO . . . B 2 5.624 3.176 13.926 1 20 ? C1 BCO 201 A 1 
HETATM 7 C C2 BCO . . . B 2 4.437 3.428 14.82 1 20 ? C2 BCO 201 A 1 
HETATM 8 O O3 BCO . . . B 2 4.656 2.933 16.138 1 20 ? O3 BCO 201 A 1 
HETATM 9 C C4 BCO . . . B 2 4.371 4.944 14.798 1 20 ? C4 BCO 201 A 1 
HETATM 10 N N1 BCO . . . B 2 3.027 5.449 15.166 1 20 ? N1 BCO 201 A 1 
HETATM 11 C C7 BCO . . . B 2 2.785 6.276 16.193 1 20 ? C7 BCO 201 A 1 
HETATM 12 N N2 BCO . . . B 2 1.478 6.577 16.296 1 20 ? N2 BCO 201 A 1 
HETATM 13 C C8 BCO . . . B 2 0.892 5.889 15.254 1 20 ? C8 BCO 201 A 1 
HETATM 14 C C6 BCO . . . B 2 1.856 5.2 14.566 1 20 ? C6 BCO 201 A 1 
HETATM 15 N N3 BCO . . . B 2 1.627 4.417 13.484 1 20 ? N3 BCO 201 A 1 
HETATM 16 C C15 BCO . . . B 2 0.33 4.393 13.157 1 20 ? C15 BCO 201 A 1 
HETATM 17 N N4 BCO . . . B 2 -0.692 5.017 13.75 1 20 ? N4 BCO 201 A 1 
HETATM 18 C C12 BCO . . . B 2 -0.439 5.789 14.823 1 20 ? C12 BCO 201 A 1 
HETATM 19 N N5 BCO . . . B 2 -1.459 6.429 15.434 1 20 ? N5 BCO 201 A 1 
HETATM 20 O O1 BCO . . . B 2 4.713 5.33 13.467 1 20 ? O1 BCO 201 A 1 
HETATM 21 C C3 BCO . . . B 2 5.42 4.242 12.865 1 20 ? C3 BCO 201 A 1 
HETATM 22 C C5 BCO . . . B 2 4.616 3.744 11.678 1 20 ? C5 BCO 201 A 1 
HETATM 23 O O4 BCO . . . B 2 5.085 2.458 11.298 1 20 ? O4 BCO 201 A 1 
HETATM 24 P P2 BCO . . . B 2 5.319 2.102 9.756 1 20 ? P2 BCO 201 A 1 
HETATM 25 O O12 BCO . . . B 2 6.411 2.975 9.205 1 20 ? O12 BCO 201 A 1 
HETATM 26 O O10 BCO . . . B 2 5.435 0.609 9.657 1 20 ? O10 BCO 201 A 1 
HETATM 27 O O7 BCO . . . B 2 3.94 2.534 9.065 1 20 ? O7 BCO 201 A 1 
HETATM 28 P P3 BCO . . . B 2 2.729 1.655 8.495 1 20 ? P3 BCO 201 A 1 
HETATM 29 O O14 BCO . . . B 2 2.151 0.864 9.633 1 20 ? O14 BCO 201 A 1 
HETATM 30 O O13 BCO . . . B 2 3.238 0.932 7.282 1 20 ? O13 BCO 201 A 1 
HETATM 31 O O8 BCO . . . B 2 1.648 2.74 8.006 1 20 ? O8 BCO 201 A 1 
HETATM 32 C C11 BCO . . . B 2 1.124 3.749 8.865 1 20 ? C11 BCO 201 A 1 
HETATM 33 C C9 BCO . . . B 2 -0.216 4.235 8.317 1 20 ? C9 BCO 201 A 1 
HETATM 34 C C13 BCO . . . B 2 -0.046 4.657 6.86 1 20 ? C13 BCO 201 A 1 
HETATM 35 C C14 BCO . . . B 2 -0.696 5.425 9.138 1 20 ? C14 BCO 201 A 1 
HETATM 36 C C10 BCO . . . B 2 -1.237 3.08 8.419 1 20 ? C10 BCO 201 A 1 
HETATM 37 O O11 BCO . . . B 2 -1.516 2.831 9.798 1 20 ? O11 BCO 201 A 1 
HETATM 38 C C16 BCO . . . B 2 -2.524 3.401 7.713 1 20 ? C16 BCO 201 A 1 
HETATM 39 O O15 BCO . . . B 2 -2.595 3.314 6.504 1 20 ? O15 BCO 201 A 1 
HETATM 40 N N6 BCO . . . B 2 -3.551 3.76 8.479 1 20 ? N6 BCO 201 A 1 
HETATM 41 C C17 BCO . . . B 2 -4.841 4.144 7.94 1 20 ? C17 BCO 201 A 1 
HETATM 42 C C18 BCO . . . B 2 -4.747 5.313 6.969 1 20 ? C18 BCO 201 A 1 
HETATM 43 C C19 BCO . . . B 2 -4.561 6.598 7.743 1 20 ? C19 BCO 201 A 1 
HETATM 44 O O16 BCO . . . B 2 -5.073 6.736 8.839 1 20 ? O16 BCO 201 A 1 
HETATM 45 N N7 BCO . . . B 2 -3.813 7.528 7.157 1 20 ? N7 BCO 201 A 1 
HETATM 46 C C20 BCO . . . B 2 -3.742 8.906 7.599 1 20 ? C20 BCO 201 A 1 
HETATM 47 C C21 BCO . . . B 2 -5.109 9.509 7.897 1 20 ? C21 BCO 201 A 1 
HETATM 48 S S1 BCO . . . B 2 -5.01 11.261 7.757 1 20 ? S1 BCO 201 A 1 
HETATM 49 C C22 BCO . . . B 2 -4.7 11.439 6.03 1 20 ? C22 BCO 201 A 1 
HETATM 50 O O17 BCO . . . B 2 -4.606 10.474 5.295 1 20 ? O17 BCO 201 A 1 
HETATM 51 C C23 BCO . . . B 2 -4.569 12.868 5.561 1 20 ? C23 BCO 201 A 1 
HETATM 52 C C24 BCO . . . B 2 -5.829 13.69 5.788 1 20 ? C24 BCO 201 A 1 
HETATM 53 C C25 BCO . . . B 2 -7.043 13.007 5.201 1 20 ? C25 BCO 201 A 1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           451 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           53 
#