data_5H8G
#
_model_server_result.job_id            kB18qIAivn12hFzcRazvMA 
_model_server_result.datetime_utc      '2024-11-26 11:36:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5h8g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"T","auth_seq_id":419}' 
#
_entry.id    5H8G 
#
_exptl.entry_id    5H8G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    18 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5H8G 
_cell.length_a            47.81 
_cell.length_b            78.81 
_cell.length_c            81.88 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5H8G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 148 n n 
C1 C2 EDO sing 149 n n 
C1 H11 EDO sing 150 n n 
C1 H12 EDO sing 151 n n 
O1 HO1 EDO sing 152 n n 
C2 O2 EDO sing 153 n n 
C2 H21 EDO sing 154 n n 
C2 H22 EDO sing 155 n n 
O2 HO2 EDO sing 156 n n 
#
_atom_sites.entry_id                     5H8G 
_atom_sites.fract_transf_matrix[1][1]    0.020916 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012689 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012213 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 401 1 CL CL . 
C 2 CL A 1 402 2 CL CL . 
D 3 EDO A 1 403 1 EDO EDO . 
E 3 EDO A 1 404 2 EDO EDO . 
F 3 EDO A 1 405 3 EDO EDO . 
G 3 EDO A 1 406 4 EDO EDO . 
H 3 EDO A 1 407 5 EDO EDO . 
I 3 EDO A 1 408 6 EDO EDO . 
J 3 EDO A 1 409 7 EDO EDO . 
K 3 EDO A 1 410 8 EDO EDO . 
L 3 EDO A 1 411 9 EDO EDO . 
M 3 EDO A 1 412 10 EDO EDO . 
N 3 EDO A 1 413 11 EDO EDO . 
O 3 EDO A 1 414 12 EDO EDO . 
P 3 EDO A 1 415 13 EDO EDO . 
Q 3 EDO A 1 416 14 EDO EDO . 
R 3 EDO A 1 417 15 EDO EDO . 
S 3 EDO A 1 418 16 EDO EDO . 
T 3 EDO A 1 419 17 EDO EDO . 
U 3 EDO A 1 420 18 EDO EDO . 
V 4 5Y4 A 1 421 1 5Y4 INH . 
W 5 HOH A 1 501 42 HOH HOH . 
W 5 HOH A 2 502 126 HOH HOH . 
W 5 HOH A 3 503 5 HOH HOH . 
W 5 HOH A 4 504 85 HOH HOH . 
W 5 HOH A 5 505 114 HOH HOH . 
W 5 HOH A 6 506 11 HOH HOH . 
W 5 HOH A 7 507 87 HOH HOH . 
W 5 HOH A 8 508 19 HOH HOH . 
W 5 HOH A 9 509 26 HOH HOH . 
W 5 HOH A 10 510 66 HOH HOH . 
W 5 HOH A 11 511 84 HOH HOH . 
W 5 HOH A 12 512 49 HOH HOH . 
W 5 HOH A 13 513 108 HOH HOH . 
W 5 HOH A 14 514 7 HOH HOH . 
W 5 HOH A 15 515 74 HOH HOH . 
W 5 HOH A 16 516 151 HOH HOH . 
W 5 HOH A 17 517 130 HOH HOH . 
W 5 HOH A 18 518 166 HOH HOH . 
W 5 HOH A 19 519 9 HOH HOH . 
W 5 HOH A 20 520 158 HOH HOH . 
W 5 HOH A 21 521 95 HOH HOH . 
W 5 HOH A 22 522 125 HOH HOH . 
W 5 HOH A 23 523 44 HOH HOH . 
W 5 HOH A 24 524 141 HOH HOH . 
W 5 HOH A 25 525 189 HOH HOH . 
W 5 HOH A 26 526 144 HOH HOH . 
W 5 HOH A 27 527 90 HOH HOH . 
W 5 HOH A 28 528 159 HOH HOH . 
W 5 HOH A 29 529 179 HOH HOH . 
W 5 HOH A 30 530 160 HOH HOH . 
W 5 HOH A 31 531 168 HOH HOH . 
W 5 HOH A 32 532 184 HOH HOH . 
W 5 HOH A 33 533 25 HOH HOH . 
W 5 HOH A 34 534 75 HOH HOH . 
W 5 HOH A 35 535 35 HOH HOH . 
W 5 HOH A 36 536 128 HOH HOH . 
W 5 HOH A 37 537 86 HOH HOH . 
W 5 HOH A 38 538 122 HOH HOH . 
W 5 HOH A 39 539 100 HOH HOH . 
W 5 HOH A 40 540 111 HOH HOH . 
W 5 HOH A 41 541 52 HOH HOH . 
W 5 HOH A 42 542 18 HOH HOH . 
W 5 HOH A 43 543 164 HOH HOH . 
W 5 HOH A 44 544 109 HOH HOH . 
W 5 HOH A 45 545 48 HOH HOH . 
W 5 HOH A 46 546 32 HOH HOH . 
W 5 HOH A 47 547 170 HOH HOH . 
W 5 HOH A 48 548 121 HOH HOH . 
W 5 HOH A 49 549 152 HOH HOH . 
W 5 HOH A 50 550 185 HOH HOH . 
W 5 HOH A 51 551 76 HOH HOH . 
W 5 HOH A 52 552 53 HOH HOH . 
W 5 HOH A 53 553 34 HOH HOH . 
W 5 HOH A 54 554 91 HOH HOH . 
W 5 HOH A 55 555 6 HOH HOH . 
W 5 HOH A 56 556 17 HOH HOH . 
W 5 HOH A 57 557 139 HOH HOH . 
W 5 HOH A 58 558 143 HOH HOH . 
W 5 HOH A 59 559 65 HOH HOH . 
W 5 HOH A 60 560 154 HOH HOH . 
W 5 HOH A 61 561 72 HOH HOH . 
W 5 HOH A 62 562 110 HOH HOH . 
W 5 HOH A 63 563 69 HOH HOH . 
W 5 HOH A 64 564 78 HOH HOH . 
W 5 HOH A 65 565 167 HOH HOH . 
W 5 HOH A 66 566 38 HOH HOH . 
W 5 HOH A 67 567 4 HOH HOH . 
W 5 HOH A 68 568 55 HOH HOH . 
W 5 HOH A 69 569 15 HOH HOH . 
W 5 HOH A 70 570 64 HOH HOH . 
W 5 HOH A 71 571 197 HOH HOH . 
W 5 HOH A 72 572 133 HOH HOH . 
W 5 HOH A 73 573 99 HOH HOH . 
W 5 HOH A 74 574 88 HOH HOH . 
W 5 HOH A 75 575 199 HOH HOH . 
W 5 HOH A 76 576 20 HOH HOH . 
W 5 HOH A 77 577 123 HOH HOH . 
W 5 HOH A 78 578 180 HOH HOH . 
W 5 HOH A 79 579 56 HOH HOH . 
W 5 HOH A 80 580 2 HOH HOH . 
W 5 HOH A 81 581 119 HOH HOH . 
W 5 HOH A 82 582 148 HOH HOH . 
W 5 HOH A 83 583 12 HOH HOH . 
W 5 HOH A 84 584 21 HOH HOH . 
W 5 HOH A 85 585 186 HOH HOH . 
W 5 HOH A 86 586 162 HOH HOH . 
W 5 HOH A 87 587 1 HOH HOH . 
W 5 HOH A 88 588 29 HOH HOH . 
W 5 HOH A 89 589 194 HOH HOH . 
W 5 HOH A 90 590 24 HOH HOH . 
W 5 HOH A 91 591 27 HOH HOH . 
W 5 HOH A 92 592 181 HOH HOH . 
W 5 HOH A 93 593 195 HOH HOH . 
W 5 HOH A 94 594 14 HOH HOH . 
W 5 HOH A 95 595 178 HOH HOH . 
W 5 HOH A 96 596 30 HOH HOH . 
W 5 HOH A 97 597 80 HOH HOH . 
W 5 HOH A 98 598 176 HOH HOH . 
W 5 HOH A 99 599 187 HOH HOH . 
W 5 HOH A 100 600 8 HOH HOH . 
W 5 HOH A 101 601 73 HOH HOH . 
W 5 HOH A 102 602 77 HOH HOH . 
W 5 HOH A 103 603 33 HOH HOH . 
W 5 HOH A 104 604 16 HOH HOH . 
W 5 HOH A 105 605 163 HOH HOH . 
W 5 HOH A 106 606 43 HOH HOH . 
W 5 HOH A 107 607 96 HOH HOH . 
W 5 HOH A 108 608 116 HOH HOH . 
W 5 HOH A 109 609 174 HOH HOH . 
W 5 HOH A 110 610 22 HOH HOH . 
W 5 HOH A 111 611 112 HOH HOH . 
W 5 HOH A 112 612 31 HOH HOH . 
W 5 HOH A 113 613 183 HOH HOH . 
W 5 HOH A 114 614 145 HOH HOH . 
W 5 HOH A 115 615 37 HOH HOH . 
W 5 HOH A 116 616 57 HOH HOH . 
W 5 HOH A 117 617 172 HOH HOH . 
W 5 HOH A 118 618 161 HOH HOH . 
W 5 HOH A 119 619 36 HOH HOH . 
W 5 HOH A 120 620 47 HOH HOH . 
W 5 HOH A 121 621 89 HOH HOH . 
W 5 HOH A 122 622 136 HOH HOH . 
W 5 HOH A 123 623 150 HOH HOH . 
W 5 HOH A 124 624 60 HOH HOH . 
W 5 HOH A 125 625 68 HOH HOH . 
W 5 HOH A 126 626 129 HOH HOH . 
W 5 HOH A 127 627 173 HOH HOH . 
W 5 HOH A 128 628 28 HOH HOH . 
W 5 HOH A 129 629 61 HOH HOH . 
W 5 HOH A 130 630 40 HOH HOH . 
W 5 HOH A 131 631 102 HOH HOH . 
W 5 HOH A 132 632 103 HOH HOH . 
W 5 HOH A 133 633 39 HOH HOH . 
W 5 HOH A 134 634 58 HOH HOH . 
W 5 HOH A 135 635 63 HOH HOH . 
W 5 HOH A 136 636 93 HOH HOH . 
W 5 HOH A 137 637 10 HOH HOH . 
W 5 HOH A 138 638 171 HOH HOH . 
W 5 HOH A 139 639 81 HOH HOH . 
W 5 HOH A 140 640 146 HOH HOH . 
W 5 HOH A 141 641 94 HOH HOH . 
W 5 HOH A 142 642 132 HOH HOH . 
W 5 HOH A 143 643 50 HOH HOH . 
W 5 HOH A 144 644 140 HOH HOH . 
W 5 HOH A 145 645 117 HOH HOH . 
W 5 HOH A 146 646 149 HOH HOH . 
W 5 HOH A 147 647 62 HOH HOH . 
W 5 HOH A 148 648 41 HOH HOH . 
W 5 HOH A 149 649 157 HOH HOH . 
W 5 HOH A 150 650 147 HOH HOH . 
W 5 HOH A 151 651 118 HOH HOH . 
W 5 HOH A 152 652 82 HOH HOH . 
W 5 HOH A 153 653 175 HOH HOH . 
W 5 HOH A 154 654 13 HOH HOH . 
W 5 HOH A 155 655 83 HOH HOH . 
W 5 HOH A 156 656 138 HOH HOH . 
W 5 HOH A 157 657 124 HOH HOH . 
W 5 HOH A 158 658 46 HOH HOH . 
W 5 HOH A 159 659 193 HOH HOH . 
W 5 HOH A 160 660 182 HOH HOH . 
W 5 HOH A 161 661 196 HOH HOH . 
W 5 HOH A 162 662 107 HOH HOH . 
W 5 HOH A 163 663 67 HOH HOH . 
W 5 HOH A 164 664 135 HOH HOH . 
W 5 HOH A 165 665 105 HOH HOH . 
W 5 HOH A 166 666 131 HOH HOH . 
W 5 HOH A 167 667 198 HOH HOH . 
W 5 HOH A 168 668 106 HOH HOH . 
W 5 HOH A 169 669 115 HOH HOH . 
W 5 HOH A 170 670 70 HOH HOH . 
W 5 HOH A 171 671 45 HOH HOH . 
W 5 HOH A 172 672 113 HOH HOH . 
W 5 HOH A 173 673 177 HOH HOH . 
W 5 HOH A 174 674 190 HOH HOH . 
W 5 HOH A 175 675 97 HOH HOH . 
W 5 HOH A 176 676 142 HOH HOH . 
W 5 HOH A 177 677 127 HOH HOH . 
W 5 HOH A 178 678 3 HOH HOH . 
W 5 HOH A 179 679 104 HOH HOH . 
W 5 HOH A 180 680 101 HOH HOH . 
W 5 HOH A 181 681 120 HOH HOH . 
W 5 HOH A 182 682 137 HOH HOH . 
W 5 HOH A 183 683 92 HOH HOH . 
W 5 HOH A 184 684 200 HOH HOH . 
W 5 HOH A 185 685 188 HOH HOH . 
W 5 HOH A 186 686 59 HOH HOH . 
W 5 HOH A 187 687 51 HOH HOH . 
W 5 HOH A 188 688 169 HOH HOH . 
W 5 HOH A 189 689 155 HOH HOH . 
W 5 HOH A 190 690 54 HOH HOH . 
W 5 HOH A 191 691 23 HOH HOH . 
W 5 HOH A 192 692 71 HOH HOH . 
W 5 HOH A 193 693 153 HOH HOH . 
W 5 HOH A 194 694 191 HOH HOH . 
W 5 HOH A 195 695 98 HOH HOH . 
W 5 HOH A 196 696 79 HOH HOH . 
W 5 HOH A 197 697 134 HOH HOH . 
W 5 HOH A 198 698 165 HOH HOH . 
W 5 HOH A 199 699 201 HOH HOH . 
W 5 HOH A 200 700 156 HOH HOH . 
W 5 HOH A 201 701 192 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . T 3 -3.901 -1.074 14.213 1 27.54 ? C1 EDO 419 A 1 
HETATM 2 O O1 EDO . . . T 3 -3.809 -2.494 14.145 1 26.89 ? O1 EDO 419 A 1 
HETATM 3 C C2 EDO . . . T 3 -2.492 -0.43 14.111 1 27.51 ? C2 EDO 419 A 1 
HETATM 4 O O2 EDO . . . T 3 -1.611 -1.023 15.071 1 24.32 ? O2 EDO 419 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           332 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           4 
#