data_5H8M # _model_server_result.job_id nW4CHETHHJ45lZarHB4fSQ _model_server_result.datetime_utc '2024-11-27 23:55:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5h8m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 5H8M # _exptl.entry_id 5H8M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5H8M _cell.length_a 80.263 _cell.length_b 80.263 _cell.length_c 226.438 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5H8M _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 434 A GLU 434 1_555 B MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc2 A OD1 ASP 462 A ASP 462 1_555 B MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.863 ? metalc ? metalc3 B MG MG . A MG 801 1_555 C O1A LMR . A LMR 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.852 ? metalc ? metalc4 B MG MG . A MG 801 1_555 D O HOH . A HOH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc5 B MG MG . A MG 801 1_555 D O HOH . A HOH 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5H8M _atom_sites.fract_transf_matrix[1][1] 0.012459 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004416 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 801 1 MG MG . C 3 LMR A 1 802 1 LMR LIG . D 4 HOH A 1 901 35 HOH HOH . D 4 HOH A 2 902 1 HOH HOH . D 4 HOH A 3 903 19 HOH HOH . D 4 HOH A 4 904 46 HOH HOH . D 4 HOH A 5 905 3 HOH HOH . D 4 HOH A 6 906 9 HOH HOH . D 4 HOH A 7 907 13 HOH HOH . D 4 HOH A 8 908 44 HOH HOH . D 4 HOH A 9 909 42 HOH HOH . D 4 HOH A 10 910 57 HOH HOH . D 4 HOH A 11 911 37 HOH HOH . D 4 HOH A 12 912 54 HOH HOH . D 4 HOH A 13 913 50 HOH HOH . D 4 HOH A 14 914 43 HOH HOH . D 4 HOH A 15 915 51 HOH HOH . D 4 HOH A 16 916 24 HOH HOH . D 4 HOH A 17 917 10 HOH HOH . D 4 HOH A 18 918 6 HOH HOH . D 4 HOH A 19 919 32 HOH HOH . D 4 HOH A 20 920 55 HOH HOH . D 4 HOH A 21 921 18 HOH HOH . D 4 HOH A 22 922 58 HOH HOH . D 4 HOH A 23 923 40 HOH HOH . D 4 HOH A 24 924 34 HOH HOH . D 4 HOH A 25 925 12 HOH HOH . D 4 HOH A 26 926 56 HOH HOH . D 4 HOH A 27 927 38 HOH HOH . D 4 HOH A 28 928 39 HOH HOH . D 4 HOH A 29 929 15 HOH HOH . D 4 HOH A 30 930 7 HOH HOH . D 4 HOH A 31 931 59 HOH HOH . D 4 HOH A 32 932 16 HOH HOH . D 4 HOH A 33 933 45 HOH HOH . D 4 HOH A 34 934 36 HOH HOH . D 4 HOH A 35 935 49 HOH HOH . D 4 HOH A 36 936 8 HOH HOH . D 4 HOH A 37 937 21 HOH HOH . D 4 HOH A 38 938 52 HOH HOH . D 4 HOH A 39 939 30 HOH HOH . D 4 HOH A 40 940 27 HOH HOH . D 4 HOH A 41 941 28 HOH HOH . D 4 HOH A 42 942 33 HOH HOH . D 4 HOH A 43 943 26 HOH HOH . D 4 HOH A 44 944 25 HOH HOH . D 4 HOH A 45 945 61 HOH HOH . D 4 HOH A 46 946 23 HOH HOH . D 4 HOH A 47 947 20 HOH HOH . D 4 HOH A 48 948 47 HOH HOH . D 4 HOH A 49 949 31 HOH HOH . D 4 HOH A 50 950 48 HOH HOH . D 4 HOH A 51 951 4 HOH HOH . D 4 HOH A 52 952 29 HOH HOH . D 4 HOH A 53 953 22 HOH HOH . D 4 HOH A 54 954 53 HOH HOH . D 4 HOH A 55 955 60 HOH HOH . D 4 HOH A 56 956 41 HOH HOH . D 4 HOH A 57 957 62 HOH HOH . D 4 HOH A 58 958 14 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 39.571 _atom_site.Cartn_y 82.183 _atom_site.Cartn_z 61.883 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.05 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 801 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #