data_5H9D # _model_server_result.job_id pJS4wGhOTurjdSRbxx9r2g _model_server_result.datetime_utc '2024-12-21 12:39:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5h9d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":502}' # _entry.id 5H9D # _exptl.entry_id 5H9D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5H9D _cell.length_a 137.394 _cell.length_b 137.642 _cell.length_c 144.05 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5H9D _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,H,J,K,M,O 1 1 B,D,F,I,L,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 5H9D _atom_sites.fract_transf_matrix[1][1] 0.007278 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007265 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006942 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 PO4 A 1 501 501 PO4 PO4 . H 4 PO4 A 1 502 502 PO4 PO4 . I 4 PO4 B 1 401 504 PO4 PO4 . J 4 PO4 K 1 201 503 PO4 PO4 . K 5 HOH A 1 601 36 HOH HOH . K 5 HOH A 2 602 85 HOH HOH . K 5 HOH A 3 603 34 HOH HOH . K 5 HOH A 4 604 1 HOH HOH . K 5 HOH A 5 605 65 HOH HOH . K 5 HOH A 6 606 76 HOH HOH . K 5 HOH A 7 607 33 HOH HOH . K 5 HOH A 8 608 47 HOH HOH . K 5 HOH A 9 609 35 HOH HOH . K 5 HOH A 10 610 64 HOH HOH . K 5 HOH A 11 611 37 HOH HOH . K 5 HOH A 12 612 111 HOH HOH . K 5 HOH A 13 613 25 HOH HOH . K 5 HOH A 14 614 77 HOH HOH . K 5 HOH A 15 615 39 HOH HOH . K 5 HOH A 16 616 38 HOH HOH . K 5 HOH A 17 617 48 HOH HOH . K 5 HOH A 18 618 40 HOH HOH . K 5 HOH A 19 619 41 HOH HOH . K 5 HOH A 20 620 2 HOH HOH . K 5 HOH A 21 621 128 HOH HOH . L 5 HOH B 1 501 84 HOH HOH . L 5 HOH B 2 502 87 HOH HOH . L 5 HOH B 3 503 90 HOH HOH . L 5 HOH B 4 504 95 HOH HOH . L 5 HOH B 5 505 21 HOH HOH . L 5 HOH B 6 506 82 HOH HOH . L 5 HOH B 7 507 130 HOH HOH . L 5 HOH B 8 508 88 HOH HOH . L 5 HOH B 9 509 22 HOH HOH . L 5 HOH B 10 510 122 HOH HOH . L 5 HOH B 11 511 89 HOH HOH . L 5 HOH B 12 512 20 HOH HOH . L 5 HOH B 13 513 105 HOH HOH . L 5 HOH B 14 514 62 HOH HOH . L 5 HOH B 15 515 23 HOH HOH . L 5 HOH B 16 516 83 HOH HOH . L 5 HOH B 17 517 24 HOH HOH . L 5 HOH B 18 518 86 HOH HOH . L 5 HOH B 19 519 42 HOH HOH . L 5 HOH B 20 520 54 HOH HOH . L 5 HOH B 21 521 120 HOH HOH . L 5 HOH B 22 522 78 HOH HOH . L 5 HOH B 23 523 123 HOH HOH . L 5 HOH B 24 524 81 HOH HOH . L 5 HOH B 25 525 80 HOH HOH . L 5 HOH B 26 526 79 HOH HOH . M 5 HOH C 1 201 30 HOH HOH . M 5 HOH C 2 202 94 HOH HOH . M 5 HOH C 3 203 45 HOH HOH . M 5 HOH C 4 204 100 HOH HOH . M 5 HOH C 5 205 103 HOH HOH . M 5 HOH C 6 206 44 HOH HOH . M 5 HOH C 7 207 93 HOH HOH . M 5 HOH C 8 208 32 HOH HOH . M 5 HOH C 9 209 117 HOH HOH . M 5 HOH C 10 210 104 HOH HOH . M 5 HOH C 11 211 115 HOH HOH . M 5 HOH C 12 212 118 HOH HOH . M 5 HOH C 13 213 112 HOH HOH . M 5 HOH C 14 214 102 HOH HOH . M 5 HOH C 15 215 46 HOH HOH . M 5 HOH C 16 216 125 HOH HOH . M 5 HOH C 17 217 99 HOH HOH . M 5 HOH C 18 218 7 HOH HOH . M 5 HOH C 19 219 101 HOH HOH . M 5 HOH C 20 220 43 HOH HOH . N 5 HOH D 1 201 91 HOH HOH . N 5 HOH D 2 202 108 HOH HOH . N 5 HOH D 3 203 31 HOH HOH . N 5 HOH D 4 204 109 HOH HOH . N 5 HOH D 5 205 116 HOH HOH . N 5 HOH D 6 206 110 HOH HOH . N 5 HOH D 7 207 126 HOH HOH . N 5 HOH D 8 208 106 HOH HOH . N 5 HOH D 9 209 70 HOH HOH . N 5 HOH D 10 210 96 HOH HOH . N 5 HOH D 11 211 113 HOH HOH . N 5 HOH D 12 212 98 HOH HOH . N 5 HOH D 13 213 60 HOH HOH . N 5 HOH D 14 214 57 HOH HOH . N 5 HOH D 15 215 92 HOH HOH . N 5 HOH D 16 216 56 HOH HOH . N 5 HOH D 17 217 97 HOH HOH . N 5 HOH D 18 218 71 HOH HOH . N 5 HOH D 19 219 59 HOH HOH . O 5 HOH K 1 301 107 HOH HOH . O 5 HOH K 2 302 127 HOH HOH . O 5 HOH K 3 303 50 HOH HOH . O 5 HOH K 4 304 55 HOH HOH . O 5 HOH K 5 305 63 HOH HOH . O 5 HOH K 6 306 49 HOH HOH . O 5 HOH K 7 307 51 HOH HOH . O 5 HOH K 8 308 66 HOH HOH . O 5 HOH K 9 309 61 HOH HOH . O 5 HOH K 10 310 114 HOH HOH . O 5 HOH K 11 311 52 HOH HOH . O 5 HOH K 12 312 67 HOH HOH . O 5 HOH K 13 313 68 HOH HOH . O 5 HOH K 14 314 53 HOH HOH . O 5 HOH K 15 315 75 HOH HOH . O 5 HOH K 16 316 58 HOH HOH . O 5 HOH K 17 317 73 HOH HOH . P 5 HOH L 1 201 26 HOH HOH . P 5 HOH L 2 202 8 HOH HOH . P 5 HOH L 3 203 17 HOH HOH . P 5 HOH L 4 204 19 HOH HOH . P 5 HOH L 5 205 18 HOH HOH . P 5 HOH L 6 206 119 HOH HOH . P 5 HOH L 7 207 15 HOH HOH . P 5 HOH L 8 208 16 HOH HOH . P 5 HOH L 9 209 9 HOH HOH . P 5 HOH L 10 210 27 HOH HOH . P 5 HOH L 11 211 12 HOH HOH . P 5 HOH L 12 212 28 HOH HOH . P 5 HOH L 13 213 4 HOH HOH . P 5 HOH L 14 214 3 HOH HOH . P 5 HOH L 15 215 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . H 4 12.082 36.298 31.46 1 147.1 ? P PO4 502 A 1 HETATM 2 O O1 PO4 . . . H 4 10.884 35.828 30.719 1 146.8 ? O1 PO4 502 A 1 HETATM 3 O O2 PO4 . . . H 4 11.682 36.748 32.819 1 146.17 ? O2 PO4 502 A 1 HETATM 4 O O3 PO4 . . . H 4 13.06 35.186 31.573 1 147.05 ? O3 PO4 502 A 1 HETATM 5 O O4 PO4 . . . H 4 12.704 37.431 30.728 1 146.97 ? O4 PO4 502 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #