data_5H9S
#
_model_server_result.job_id            VWHHAEkquSZBAKC8y3yUyw 
_model_server_result.datetime_utc      '2025-01-11 03:04:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5h9s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    5H9S 
#
_exptl.entry_id    5H9S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              503.499 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2~{S},3~{R},4~{S},5~{R},6~{R})-2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-4-[4-(3-fluorophenyl)-1,2,3-triazol-1-yl]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]sulfanyl-6-(hydroxymethyl)oxane-3,4,5-triol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5H9S 
_cell.length_a            53.873 
_cell.length_b            64.475 
_cell.length_c            73.046 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5H9S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H26 F N3 O9 S' 
_chem_comp.formula_weight    503.499 
_chem_comp.id                TGZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2~{S},3~{R},4~{S},5~{R},6~{R})-2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-4-[4-(3-fluorophenyl)-1,2,3-triazol-1-yl]-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-2-yl]sulfanyl-6-(hydroxymethyl)oxane-3,4,5-triol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F18 C14 TGZ sing 290 n n 
C14 C15 TGZ doub 291 n y 
C14 C13 TGZ sing 292 n y 
C15 C16 TGZ sing 293 n y 
C13 C12 TGZ doub 294 n y 
O2' C2' TGZ sing 295 n n 
O3' C3' TGZ sing 296 n n 
O4 C4 TGZ sing 297 n n 
C16 C17 TGZ doub 298 n y 
C2' C3' TGZ sing 299 n n 
C2' C1' TGZ sing 300 n n 
C12 C17 TGZ sing 301 n y 
C12 C10 TGZ sing 302 n n 
C3' C4' TGZ sing 303 n n 
C6 O6 TGZ sing 304 n n 
C6 C5 TGZ sing 305 n n 
C11 C10 TGZ doub 306 n y 
C11 N7 TGZ sing 307 n y 
O5 C5 TGZ sing 308 n n 
O5 C1 TGZ sing 309 n n 
C10 N9 TGZ sing 310 n y 
S1 C1' TGZ sing 311 n n 
S1 C1 TGZ sing 312 n n 
C4 C5 TGZ sing 313 n n 
C4 C3 TGZ sing 314 n n 
C1' O5' TGZ sing 315 n n 
C2 C1 TGZ sing 316 n n 
C2 C3 TGZ sing 317 n n 
C2 O2 TGZ sing 318 n n 
N7 C3 TGZ sing 319 n n 
N7 N8 TGZ sing 320 n y 
O4' C4' TGZ sing 321 n n 
C4' C5' TGZ sing 322 n n 
N9 N8 TGZ doub 323 n y 
O5' C5' TGZ sing 324 n n 
C5' C6' TGZ sing 325 n n 
C6' O6' TGZ sing 326 n n 
C2 H1 TGZ sing 327 n n 
C3 H2 TGZ sing 328 n n 
C5 H3 TGZ sing 329 n n 
C6 H4 TGZ sing 330 n n 
C6 H5 TGZ sing 331 n n 
C1 H6 TGZ sing 332 n n 
C1' H7 TGZ sing 333 n n 
C5' H8 TGZ sing 334 n n 
C6' H9 TGZ sing 335 n n 
C6' H10 TGZ sing 336 n n 
O6 H11 TGZ sing 337 n n 
O6' H12 TGZ sing 338 n n 
C4 H13 TGZ sing 339 n n 
C4' H14 TGZ sing 340 n n 
O4 H15 TGZ sing 341 n n 
O4' H16 TGZ sing 342 n n 
C3' H17 TGZ sing 343 n n 
O3' H18 TGZ sing 344 n n 
C2' H19 TGZ sing 345 n n 
O2 H20 TGZ sing 346 n n 
O2' H21 TGZ sing 347 n n 
C11 H22 TGZ sing 348 n n 
C13 H23 TGZ sing 349 n n 
C15 H24 TGZ sing 350 n n 
C16 H25 TGZ sing 351 n n 
C17 H26 TGZ sing 352 n n 
#
_atom_sites.entry_id                     5H9S 
_atom_sites.fract_transf_matrix[1][1]    0.018562 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01551 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01369 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TGZ B 1 201 1 TGZ TAZ . 
D 3 HOH A 1 201 24 HOH HOH . 
D 3 HOH A 2 202 19 HOH HOH . 
D 3 HOH A 3 203 57 HOH HOH . 
D 3 HOH A 4 204 16 HOH HOH . 
D 3 HOH A 5 205 9 HOH HOH . 
D 3 HOH A 6 206 29 HOH HOH . 
D 3 HOH A 7 207 3 HOH HOH . 
D 3 HOH A 8 208 22 HOH HOH . 
D 3 HOH A 9 209 4 HOH HOH . 
D 3 HOH A 10 210 36 HOH HOH . 
D 3 HOH A 11 211 47 HOH HOH . 
D 3 HOH A 12 212 62 HOH HOH . 
D 3 HOH A 13 213 39 HOH HOH . 
D 3 HOH A 14 214 5 HOH HOH . 
D 3 HOH A 15 215 15 HOH HOH . 
D 3 HOH A 16 216 1 HOH HOH . 
D 3 HOH A 17 217 38 HOH HOH . 
D 3 HOH A 18 218 12 HOH HOH . 
D 3 HOH A 19 219 64 HOH HOH . 
D 3 HOH A 20 220 32 HOH HOH . 
D 3 HOH A 21 221 2 HOH HOH . 
D 3 HOH A 22 222 41 HOH HOH . 
D 3 HOH A 23 223 14 HOH HOH . 
D 3 HOH A 24 224 20 HOH HOH . 
D 3 HOH A 25 225 56 HOH HOH . 
D 3 HOH A 26 226 7 HOH HOH . 
D 3 HOH A 27 227 46 HOH HOH . 
D 3 HOH A 28 228 79 HOH HOH . 
D 3 HOH A 29 229 43 HOH HOH . 
D 3 HOH A 30 230 11 HOH HOH . 
D 3 HOH A 31 231 27 HOH HOH . 
D 3 HOH A 32 232 66 HOH HOH . 
D 3 HOH A 33 233 63 HOH HOH . 
D 3 HOH A 34 234 10 HOH HOH . 
D 3 HOH A 35 235 81 HOH HOH . 
D 3 HOH A 36 236 23 HOH HOH . 
D 3 HOH A 37 237 35 HOH HOH . 
D 3 HOH A 38 238 53 HOH HOH . 
D 3 HOH A 39 239 51 HOH HOH . 
D 3 HOH A 40 240 26 HOH HOH . 
D 3 HOH A 41 241 31 HOH HOH . 
D 3 HOH A 42 242 30 HOH HOH . 
D 3 HOH A 43 243 18 HOH HOH . 
D 3 HOH A 44 244 13 HOH HOH . 
D 3 HOH A 45 245 6 HOH HOH . 
D 3 HOH A 46 246 42 HOH HOH . 
D 3 HOH A 47 247 8 HOH HOH . 
D 3 HOH A 48 248 74 HOH HOH . 
D 3 HOH A 49 249 68 HOH HOH . 
D 3 HOH A 50 250 58 HOH HOH . 
D 3 HOH A 51 251 78 HOH HOH . 
D 3 HOH A 52 252 80 HOH HOH . 
D 3 HOH A 53 253 61 HOH HOH . 
D 3 HOH A 54 254 67 HOH HOH . 
D 3 HOH A 55 255 69 HOH HOH . 
D 3 HOH A 56 256 70 HOH HOH . 
D 3 HOH A 57 257 52 HOH HOH . 
D 3 HOH A 58 258 73 HOH HOH . 
D 3 HOH A 59 259 54 HOH HOH . 
D 3 HOH A 60 260 59 HOH HOH . 
D 3 HOH A 61 261 55 HOH HOH . 
D 3 HOH A 62 262 49 HOH HOH . 
E 3 HOH B 1 301 83 HOH HOH . 
E 3 HOH B 2 302 21 HOH HOH . 
E 3 HOH B 3 303 85 HOH HOH . 
E 3 HOH B 4 304 45 HOH HOH . 
E 3 HOH B 5 305 17 HOH HOH . 
E 3 HOH B 6 306 44 HOH HOH . 
E 3 HOH B 7 307 33 HOH HOH . 
E 3 HOH B 8 308 28 HOH HOH . 
E 3 HOH B 9 309 25 HOH HOH . 
E 3 HOH B 10 310 34 HOH HOH . 
E 3 HOH B 11 311 50 HOH HOH . 
E 3 HOH B 12 312 48 HOH HOH . 
E 3 HOH B 13 313 37 HOH HOH . 
E 3 HOH B 14 314 72 HOH HOH . 
E 3 HOH B 15 315 60 HOH HOH . 
E 3 HOH B 16 316 40 HOH HOH . 
E 3 HOH B 17 317 77 HOH HOH . 
E 3 HOH B 18 318 84 HOH HOH . 
E 3 HOH B 19 319 71 HOH HOH . 
E 3 HOH B 20 320 65 HOH HOH . 
E 3 HOH B 21 321 76 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 TGZ . . . C 2 -24.134 -25.073 -36.884 1 54.56 ? S1 TGZ 201 B 1 
HETATM 2 C C2 TGZ . . . C 2 -24.807 -27.599 -36.248 1 59.79 ? C2 TGZ 201 B 1 
HETATM 3 C C3 TGZ . . . C 2 -24.757 -29.076 -36.639 1 55.48 ? C3 TGZ 201 B 1 
HETATM 4 C C5 TGZ . . . C 2 -24.572 -28.39 -38.993 1 60.08 ? C5 TGZ 201 B 1 
HETATM 5 C C6 TGZ . . . C 2 -25.082 -28.557 -40.418 1 58.68 ? C6 TGZ 201 B 1 
HETATM 6 C C14 TGZ . . . C 2 -26.509 -34.054 -31.569 1 79.18 ? C14 TGZ 201 B 1 
HETATM 7 C C1 TGZ . . . C 2 -24.065 -26.787 -37.303 1 57.56 ? C1 TGZ 201 B 1 
HETATM 8 C C1' TGZ . . . C 2 -22.571 -24.376 -37.303 1 55.82 ? C1' TGZ 201 B 1 
HETATM 9 O O5 TGZ . . . C 2 -24.649 -27.015 -38.592 1 56.05 ? O5 TGZ 201 B 1 
HETATM 10 O O5' TGZ . . . C 2 -21.55 -25.014 -36.521 1 51.46 ? O5' TGZ 201 B 1 
HETATM 11 C C5' TGZ . . . C 2 -20.245 -24.517 -36.788 1 52.84 ? C5' TGZ 201 B 1 
HETATM 12 C C6' TGZ . . . C 2 -19.227 -25.348 -36.007 1 53.54 ? C6' TGZ 201 B 1 
HETATM 13 O O6 TGZ . . . C 2 -24.549 -29.753 -41.007 1 53.18 ? O6 TGZ 201 B 1 
HETATM 14 O O6' TGZ . . . C 2 -19.145 -26.679 -36.545 1 46.27 ? O6' TGZ 201 B 1 
HETATM 15 C C4 TGZ . . . C 2 -25.36 -29.26 -38.019 1 55.71 ? C4 TGZ 201 B 1 
HETATM 16 C C4' TGZ . . . C 2 -20.218 -23.042 -36.396 1 51.67 ? C4' TGZ 201 B 1 
HETATM 17 O O4 TGZ . . . C 2 -26.714 -28.812 -37.973 1 55.61 ? O4 TGZ 201 B 1 
HETATM 18 O O4' TGZ . . . C 2 -20.529 -22.927 -35.004 1 51.3 ? O4' TGZ 201 B 1 
HETATM 19 C C3' TGZ . . . C 2 -21.237 -22.268 -37.229 1 56.93 ? C3' TGZ 201 B 1 
HETATM 20 O O3' TGZ . . . C 2 -21.274 -20.882 -36.866 1 57.94 ? O3' TGZ 201 B 1 
HETATM 21 C C2' TGZ . . . C 2 -22.619 -22.879 -37.035 1 56.21 ? C2' TGZ 201 B 1 
HETATM 22 O O2 TGZ . . . C 2 -24.195 -27.394 -34.964 1 60.4 ? O2 TGZ 201 B 1 
HETATM 23 O O2' TGZ . . . C 2 -23.545 -22.272 -37.944 1 54.51 ? O2' TGZ 201 B 1 
HETATM 24 N N7 TGZ . . . C 2 -25.436 -29.924 -35.629 1 48.86 ? N7 TGZ 201 B 1 
HETATM 25 N N8 TGZ . . . C 2 -26.423 -29.317 -34.845 1 51.04 ? N8 TGZ 201 B 1 
HETATM 26 N N9 TGZ . . . C 2 -26.866 -30.343 -33.986 1 53.86 ? N9 TGZ 201 B 1 
HETATM 27 C C10 TGZ . . . C 2 -26.165 -31.467 -34.275 1 55.75 ? C10 TGZ 201 B 1 
HETATM 28 C C11 TGZ . . . C 2 -25.265 -31.198 -35.294 1 52.51 ? C11 TGZ 201 B 1 
HETATM 29 C C12 TGZ . . . C 2 -26.27 -32.788 -33.602 1 68.27 ? C12 TGZ 201 B 1 
HETATM 30 C C13 TGZ . . . C 2 -26.427 -32.829 -32.222 1 73.37 ? C13 TGZ 201 B 1 
HETATM 31 C C15 TGZ . . . C 2 -26.42 -35.237 -32.301 1 77.92 ? C15 TGZ 201 B 1 
HETATM 32 C C16 TGZ . . . C 2 -26.249 -35.194 -33.683 1 74.22 ? C16 TGZ 201 B 1 
HETATM 33 C C17 TGZ . . . C 2 -26.167 -33.967 -34.334 1 71.1 ? C17 TGZ 201 B 1 
HETATM 34 F F18 TGZ . . . C 2 -26.674 -34.09 -30.232 1 83.04 ? F18 TGZ 201 B 1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           34 
#