data_5HAG # _model_server_result.job_id K9iA8QeWcKs7TpLkMYfaDA _model_server_result.datetime_utc '2025-07-18 01:19:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hag # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 5HAG # _exptl.entry_id 5HAG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HAG _cell.length_a 133.292 _cell.length_b 133.292 _cell.length_c 133.292 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HAG _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 5HAG _atom_sites.fract_transf_matrix[1][1] 0.007502 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007502 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007502 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 501 1 GOL GOL . C 3 HOH A 1 601 134 HOH HOH . C 3 HOH A 2 602 74 HOH HOH . C 3 HOH A 3 603 101 HOH HOH . C 3 HOH A 4 604 87 HOH HOH . C 3 HOH A 5 605 115 HOH HOH . C 3 HOH A 6 606 97 HOH HOH . C 3 HOH A 7 607 13 HOH HOH . C 3 HOH A 8 608 75 HOH HOH . C 3 HOH A 9 609 26 HOH HOH . C 3 HOH A 10 610 14 HOH HOH . C 3 HOH A 11 611 47 HOH HOH . C 3 HOH A 12 612 102 HOH HOH . C 3 HOH A 13 613 96 HOH HOH . C 3 HOH A 14 614 81 HOH HOH . C 3 HOH A 15 615 125 HOH HOH . C 3 HOH A 16 616 12 HOH HOH . C 3 HOH A 17 617 60 HOH HOH . C 3 HOH A 18 618 33 HOH HOH . C 3 HOH A 19 619 29 HOH HOH . C 3 HOH A 20 620 106 HOH HOH . C 3 HOH A 21 621 80 HOH HOH . C 3 HOH A 22 622 64 HOH HOH . C 3 HOH A 23 623 56 HOH HOH . C 3 HOH A 24 624 126 HOH HOH . C 3 HOH A 25 625 11 HOH HOH . C 3 HOH A 26 626 112 HOH HOH . C 3 HOH A 27 627 104 HOH HOH . C 3 HOH A 28 628 17 HOH HOH . C 3 HOH A 29 629 51 HOH HOH . C 3 HOH A 30 630 34 HOH HOH . C 3 HOH A 31 631 54 HOH HOH . C 3 HOH A 32 632 23 HOH HOH . C 3 HOH A 33 633 58 HOH HOH . C 3 HOH A 34 634 121 HOH HOH . C 3 HOH A 35 635 46 HOH HOH . C 3 HOH A 36 636 95 HOH HOH . C 3 HOH A 37 637 48 HOH HOH . C 3 HOH A 38 638 108 HOH HOH . C 3 HOH A 39 639 22 HOH HOH . C 3 HOH A 40 640 41 HOH HOH . C 3 HOH A 41 641 111 HOH HOH . C 3 HOH A 42 642 49 HOH HOH . C 3 HOH A 43 643 2 HOH HOH . C 3 HOH A 44 644 100 HOH HOH . C 3 HOH A 45 645 32 HOH HOH . C 3 HOH A 46 646 18 HOH HOH . C 3 HOH A 47 647 7 HOH HOH . C 3 HOH A 48 648 83 HOH HOH . C 3 HOH A 49 649 35 HOH HOH . C 3 HOH A 50 650 6 HOH HOH . C 3 HOH A 51 651 91 HOH HOH . C 3 HOH A 52 652 77 HOH HOH . C 3 HOH A 53 653 110 HOH HOH . C 3 HOH A 54 654 67 HOH HOH . C 3 HOH A 55 655 44 HOH HOH . C 3 HOH A 56 656 116 HOH HOH . C 3 HOH A 57 657 98 HOH HOH . C 3 HOH A 58 658 4 HOH HOH . C 3 HOH A 59 659 69 HOH HOH . C 3 HOH A 60 660 30 HOH HOH . C 3 HOH A 61 661 89 HOH HOH . C 3 HOH A 62 662 117 HOH HOH . C 3 HOH A 63 663 27 HOH HOH . C 3 HOH A 64 664 92 HOH HOH . C 3 HOH A 65 665 52 HOH HOH . C 3 HOH A 66 666 24 HOH HOH . C 3 HOH A 67 667 53 HOH HOH . C 3 HOH A 68 668 38 HOH HOH . C 3 HOH A 69 669 103 HOH HOH . C 3 HOH A 70 670 63 HOH HOH . C 3 HOH A 71 671 94 HOH HOH . C 3 HOH A 72 672 133 HOH HOH . C 3 HOH A 73 673 65 HOH HOH . C 3 HOH A 74 674 130 HOH HOH . C 3 HOH A 75 675 31 HOH HOH . C 3 HOH A 76 676 39 HOH HOH . C 3 HOH A 77 677 16 HOH HOH . C 3 HOH A 78 678 42 HOH HOH . C 3 HOH A 79 679 119 HOH HOH . C 3 HOH A 80 680 10 HOH HOH . C 3 HOH A 81 681 78 HOH HOH . C 3 HOH A 82 682 40 HOH HOH . C 3 HOH A 83 683 90 HOH HOH . C 3 HOH A 84 684 73 HOH HOH . C 3 HOH A 85 685 113 HOH HOH . C 3 HOH A 86 686 70 HOH HOH . C 3 HOH A 87 687 9 HOH HOH . C 3 HOH A 88 688 82 HOH HOH . C 3 HOH A 89 689 129 HOH HOH . C 3 HOH A 90 690 99 HOH HOH . C 3 HOH A 91 691 107 HOH HOH . C 3 HOH A 92 692 8 HOH HOH . C 3 HOH A 93 693 72 HOH HOH . C 3 HOH A 94 694 57 HOH HOH . C 3 HOH A 95 695 66 HOH HOH . C 3 HOH A 96 696 84 HOH HOH . C 3 HOH A 97 697 21 HOH HOH . C 3 HOH A 98 698 28 HOH HOH . C 3 HOH A 99 699 5 HOH HOH . C 3 HOH A 100 700 93 HOH HOH . C 3 HOH A 101 701 3 HOH HOH . C 3 HOH A 102 702 79 HOH HOH . C 3 HOH A 103 703 68 HOH HOH . C 3 HOH A 104 704 45 HOH HOH . C 3 HOH A 105 705 36 HOH HOH . C 3 HOH A 106 706 132 HOH HOH . C 3 HOH A 107 707 37 HOH HOH . C 3 HOH A 108 708 25 HOH HOH . C 3 HOH A 109 709 105 HOH HOH . C 3 HOH A 110 710 109 HOH HOH . C 3 HOH A 111 711 122 HOH HOH . C 3 HOH A 112 712 88 HOH HOH . C 3 HOH A 113 713 50 HOH HOH . C 3 HOH A 114 714 43 HOH HOH . C 3 HOH A 115 715 127 HOH HOH . C 3 HOH A 116 716 114 HOH HOH . C 3 HOH A 117 717 124 HOH HOH . C 3 HOH A 118 718 71 HOH HOH . C 3 HOH A 119 719 15 HOH HOH . C 3 HOH A 120 720 85 HOH HOH . C 3 HOH A 121 721 55 HOH HOH . C 3 HOH A 122 722 59 HOH HOH . C 3 HOH A 123 723 76 HOH HOH . C 3 HOH A 124 724 20 HOH HOH . C 3 HOH A 125 725 120 HOH HOH . C 3 HOH A 126 726 118 HOH HOH . C 3 HOH A 127 727 123 HOH HOH . C 3 HOH A 128 728 86 HOH HOH . C 3 HOH A 129 729 128 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -38.213 4.507 -43.426 1 57.43 ? C1 GOL 501 A 1 HETATM 2 O O1 GOL . . . B 2 -39.182 5.34 -44.031 1 60.65 ? O1 GOL 501 A 1 HETATM 3 C C2 GOL . . . B 2 -37.353 3.85 -44.503 1 45.14 ? C2 GOL 501 A 1 HETATM 4 O O2 GOL . . . B 2 -38.145 2.992 -45.308 1 51.86 ? O2 GOL 501 A 1 HETATM 5 C C3 GOL . . . B 2 -36.197 3.044 -43.907 1 36.07 ? C3 GOL 501 A 1 HETATM 6 O O3 GOL . . . B 2 -36.011 3.273 -42.534 1 48.67 ? O3 GOL 501 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #