data_5HCF # _model_server_result.job_id k-yF-QfzsaQsieSiGZbu4A _model_server_result.datetime_utc '2024-10-28 02:42:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hcf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 5HCF # _exptl.entry_id 5HCF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 95.57 _cell.angle_beta 98.69 _cell.angle_gamma 119.86 _cell.entry_id 5HCF _cell.length_a 79.3 _cell.length_b 79.38 _cell.length_c 85.08 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HCF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,H,I,P 1 1 B,J,Q 2 1 C,K,L,R 3 1 D,S 4 1 E,M,N,T 5 1 F,O,U 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 K N N ? 2 M N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 83 A CYS 105 1_555 A SG CYS 114 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 B SG CYS 83 B CYS 105 1_555 B SG CYS 114 B CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 C SG CYS 83 C CYS 105 1_555 C SG CYS 114 C CYS 136 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 D SG CYS 83 D CYS 105 1_555 D SG CYS 114 D CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 E SG CYS 83 E CYS 105 1_555 E SG CYS 114 E CYS 136 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.04 ? disulf ? disulf6 F SG CYS 83 F CYS 105 1_555 F SG CYS 114 F CYS 136 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.039 ? # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5HCF _atom_sites.fract_transf_matrix[1][1] 0.01261 _atom_sites.fract_transf_matrix[1][2] 0.007239 _atom_sites.fract_transf_matrix[1][3] 0.003452 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014526 _atom_sites.fract_transf_matrix[2][3] 0.002979 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012138 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 ACY A 1 401 4 ACY ACY . H 2 ACY A 1 402 5 ACY ACY . I 3 CL A 1 403 8 CL CL . J 4 BGC B 1 401 7 BGC GLC . K 2 ACY C 1 401 2 ACY ACY . L 3 CL C 1 402 9 CL CL . M 2 ACY E 1 401 1 ACY ACY . N 2 ACY E 1 402 3 ACY ACY . O 4 BGC F 1 401 6 BGC GLC . P 5 HOH A 1 501 51 HOH HOH . P 5 HOH A 2 502 48 HOH HOH . P 5 HOH A 3 503 56 HOH HOH . P 5 HOH A 4 504 22 HOH HOH . P 5 HOH A 5 505 30 HOH HOH . P 5 HOH A 6 506 13 HOH HOH . P 5 HOH A 7 507 3 HOH HOH . P 5 HOH A 8 508 19 HOH HOH . P 5 HOH A 9 509 25 HOH HOH . P 5 HOH A 10 510 36 HOH HOH . Q 5 HOH B 1 501 39 HOH HOH . Q 5 HOH B 2 502 7 HOH HOH . Q 5 HOH B 3 503 40 HOH HOH . Q 5 HOH B 4 504 26 HOH HOH . Q 5 HOH B 5 505 18 HOH HOH . R 5 HOH C 1 501 49 HOH HOH . R 5 HOH C 2 502 9 HOH HOH . R 5 HOH C 3 503 43 HOH HOH . R 5 HOH C 4 504 35 HOH HOH . R 5 HOH C 5 505 38 HOH HOH . R 5 HOH C 6 506 47 HOH HOH . R 5 HOH C 7 507 17 HOH HOH . R 5 HOH C 8 508 23 HOH HOH . R 5 HOH C 9 509 2 HOH HOH . R 5 HOH C 10 510 31 HOH HOH . R 5 HOH C 11 511 37 HOH HOH . R 5 HOH C 12 512 52 HOH HOH . S 5 HOH D 1 401 41 HOH HOH . S 5 HOH D 2 402 50 HOH HOH . S 5 HOH D 3 403 54 HOH HOH . S 5 HOH D 4 404 20 HOH HOH . S 5 HOH D 5 405 33 HOH HOH . S 5 HOH D 6 406 8 HOH HOH . S 5 HOH D 7 407 53 HOH HOH . S 5 HOH D 8 408 12 HOH HOH . T 5 HOH E 1 501 4 HOH HOH . T 5 HOH E 2 502 5 HOH HOH . T 5 HOH E 3 503 45 HOH HOH . T 5 HOH E 4 504 55 HOH HOH . T 5 HOH E 5 505 32 HOH HOH . T 5 HOH E 6 506 46 HOH HOH . U 5 HOH F 1 501 11 HOH HOH . U 5 HOH F 2 502 29 HOH HOH . U 5 HOH F 3 503 27 HOH HOH . U 5 HOH F 4 504 42 HOH HOH . U 5 HOH F 5 505 10 HOH HOH . U 5 HOH F 6 506 21 HOH HOH . U 5 HOH F 7 507 44 HOH HOH . U 5 HOH F 8 508 1 HOH HOH . U 5 HOH F 9 509 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . G 2 -3.487 8.131 -27.049 1 54.31 ? C ACY 401 A 1 HETATM 2 O O ACY . . . G 2 -3.3 7.787 -28.25 1 54.55 ? O ACY 401 A 1 HETATM 3 O OXT ACY . . . G 2 -4.106 7.413 -26.214 1 54.02 ? OXT ACY 401 A 1 HETATM 4 C CH3 ACY . . . G 2 -2.931 9.459 -26.588 1 53.58 ? CH3 ACY 401 A 1 HETATM 5 H H1 ACY . . . G 2 -3.043 9.546 -25.508 1 64.29 ? H1 ACY 401 A 1 HETATM 6 H H2 ACY . . . G 2 -3.476 10.268 -27.075 1 64.29 ? H2 ACY 401 A 1 HETATM 7 H H3 ACY . . . G 2 -1.876 9.524 -26.854 1 64.29 ? H3 ACY 401 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 7 #