data_5HCT # _model_server_result.job_id I4tvOOs8cwxg6ZdNhnqOiw _model_server_result.datetime_utc '2024-10-19 17:21:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hct # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 5HCT # _exptl.entry_id 5HCT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.91 _cell.angle_gamma 90 _cell.entry_id 5HCT _cell.length_a 45.234 _cell.length_b 72.822 _cell.length_c 52.704 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HCT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 344 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 255 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 379 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 290 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.039 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 5HCT _atom_sites.fract_transf_matrix[1][1] 0.022107 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007571 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013732 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020056 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 401 1 DMS DMS . C 3 GOL A 1 402 1 GOL GOL . D 3 GOL A 1 403 2 GOL GOL . E 3 GOL A 1 404 3 GOL GOL . F 4 ACT A 1 405 1 ACT ACT . G 5 61P A 1 406 1 61P XXX . H 6 EDO A 1 407 1 EDO EDO . I 7 PG4 A 1 408 1 PG4 PG4 . J 8 HOH A 1 501 181 HOH HOH . J 8 HOH A 2 502 92 HOH HOH . J 8 HOH A 3 503 21 HOH HOH . J 8 HOH A 4 504 118 HOH HOH . J 8 HOH A 5 505 14 HOH HOH . J 8 HOH A 6 506 239 HOH HOH . J 8 HOH A 7 507 90 HOH HOH . J 8 HOH A 8 508 288 HOH HOH . J 8 HOH A 9 509 143 HOH HOH . J 8 HOH A 10 510 82 HOH HOH . J 8 HOH A 11 511 110 HOH HOH . J 8 HOH A 12 512 61 HOH HOH . J 8 HOH A 13 513 218 HOH HOH . J 8 HOH A 14 514 123 HOH HOH . J 8 HOH A 15 515 264 HOH HOH . J 8 HOH A 16 516 23 HOH HOH . J 8 HOH A 17 517 57 HOH HOH . J 8 HOH A 18 518 187 HOH HOH . J 8 HOH A 19 519 44 HOH HOH . J 8 HOH A 20 520 248 HOH HOH . J 8 HOH A 21 521 49 HOH HOH . J 8 HOH A 22 522 31 HOH HOH . J 8 HOH A 23 523 208 HOH HOH . J 8 HOH A 24 524 124 HOH HOH . J 8 HOH A 25 525 80 HOH HOH . J 8 HOH A 26 526 210 HOH HOH . J 8 HOH A 27 527 101 HOH HOH . J 8 HOH A 28 528 179 HOH HOH . J 8 HOH A 29 529 262 HOH HOH . J 8 HOH A 30 530 56 HOH HOH . J 8 HOH A 31 531 75 HOH HOH . J 8 HOH A 32 532 144 HOH HOH . J 8 HOH A 33 533 38 HOH HOH . J 8 HOH A 34 534 112 HOH HOH . J 8 HOH A 35 535 3 HOH HOH . J 8 HOH A 36 536 233 HOH HOH . J 8 HOH A 37 537 195 HOH HOH . J 8 HOH A 38 538 177 HOH HOH . J 8 HOH A 39 539 203 HOH HOH . J 8 HOH A 40 540 238 HOH HOH . J 8 HOH A 41 541 268 HOH HOH . J 8 HOH A 42 542 39 HOH HOH . J 8 HOH A 43 543 47 HOH HOH . J 8 HOH A 44 544 29 HOH HOH . J 8 HOH A 45 545 41 HOH HOH . J 8 HOH A 46 546 106 HOH HOH . J 8 HOH A 47 547 132 HOH HOH . J 8 HOH A 48 548 198 HOH HOH . J 8 HOH A 49 549 271 HOH HOH . J 8 HOH A 50 550 8 HOH HOH . J 8 HOH A 51 551 257 HOH HOH . J 8 HOH A 52 552 216 HOH HOH . J 8 HOH A 53 553 243 HOH HOH . J 8 HOH A 54 554 25 HOH HOH . J 8 HOH A 55 555 37 HOH HOH . J 8 HOH A 56 556 85 HOH HOH . J 8 HOH A 57 557 4 HOH HOH . J 8 HOH A 58 558 62 HOH HOH . J 8 HOH A 59 559 125 HOH HOH . J 8 HOH A 60 560 200 HOH HOH . J 8 HOH A 61 561 43 HOH HOH . J 8 HOH A 62 562 231 HOH HOH . J 8 HOH A 63 563 135 HOH HOH . J 8 HOH A 64 564 213 HOH HOH . J 8 HOH A 65 565 32 HOH HOH . J 8 HOH A 66 566 7 HOH HOH . J 8 HOH A 67 567 137 HOH HOH . J 8 HOH A 68 568 232 HOH HOH . J 8 HOH A 69 569 121 HOH HOH . J 8 HOH A 70 570 212 HOH HOH . J 8 HOH A 71 571 207 HOH HOH . J 8 HOH A 72 572 215 HOH HOH . J 8 HOH A 73 573 28 HOH HOH . J 8 HOH A 74 574 113 HOH HOH . J 8 HOH A 75 575 214 HOH HOH . J 8 HOH A 76 576 117 HOH HOH . J 8 HOH A 77 577 55 HOH HOH . J 8 HOH A 78 578 161 HOH HOH . J 8 HOH A 79 579 190 HOH HOH . J 8 HOH A 80 580 86 HOH HOH . J 8 HOH A 81 581 228 HOH HOH . J 8 HOH A 82 582 103 HOH HOH . J 8 HOH A 83 583 1 HOH HOH . J 8 HOH A 84 584 27 HOH HOH . J 8 HOH A 85 585 225 HOH HOH . J 8 HOH A 86 586 223 HOH HOH . J 8 HOH A 87 587 224 HOH HOH . J 8 HOH A 88 588 240 HOH HOH . J 8 HOH A 89 589 81 HOH HOH . J 8 HOH A 90 590 217 HOH HOH . J 8 HOH A 91 591 24 HOH HOH . J 8 HOH A 92 592 183 HOH HOH . J 8 HOH A 93 593 108 HOH HOH . J 8 HOH A 94 594 91 HOH HOH . J 8 HOH A 95 595 52 HOH HOH . J 8 HOH A 96 596 188 HOH HOH . J 8 HOH A 97 597 276 HOH HOH . J 8 HOH A 98 598 35 HOH HOH . J 8 HOH A 99 599 241 HOH HOH . J 8 HOH A 100 600 263 HOH HOH . J 8 HOH A 101 601 15 HOH HOH . J 8 HOH A 102 602 26 HOH HOH . J 8 HOH A 103 603 180 HOH HOH . J 8 HOH A 104 604 252 HOH HOH . J 8 HOH A 105 605 211 HOH HOH . J 8 HOH A 106 606 192 HOH HOH . J 8 HOH A 107 607 16 HOH HOH . J 8 HOH A 108 608 148 HOH HOH . J 8 HOH A 109 609 199 HOH HOH . J 8 HOH A 110 610 66 HOH HOH . J 8 HOH A 111 611 93 HOH HOH . J 8 HOH A 112 612 154 HOH HOH . J 8 HOH A 113 613 185 HOH HOH . J 8 HOH A 114 614 182 HOH HOH . J 8 HOH A 115 615 227 HOH HOH . J 8 HOH A 116 616 68 HOH HOH . J 8 HOH A 117 617 83 HOH HOH . J 8 HOH A 118 618 193 HOH HOH . J 8 HOH A 119 619 34 HOH HOH . J 8 HOH A 120 620 60 HOH HOH . J 8 HOH A 121 621 122 HOH HOH . J 8 HOH A 122 622 105 HOH HOH . J 8 HOH A 123 623 162 HOH HOH . J 8 HOH A 124 624 255 HOH HOH . J 8 HOH A 125 625 33 HOH HOH . J 8 HOH A 126 626 54 HOH HOH . J 8 HOH A 127 627 126 HOH HOH . J 8 HOH A 128 628 178 HOH HOH . J 8 HOH A 129 629 247 HOH HOH . J 8 HOH A 130 630 12 HOH HOH . J 8 HOH A 131 631 139 HOH HOH . J 8 HOH A 132 632 282 HOH HOH . J 8 HOH A 133 633 194 HOH HOH . J 8 HOH A 134 634 289 HOH HOH . J 8 HOH A 135 635 115 HOH HOH . J 8 HOH A 136 636 96 HOH HOH . J 8 HOH A 137 637 129 HOH HOH . J 8 HOH A 138 638 18 HOH HOH . J 8 HOH A 139 639 205 HOH HOH . J 8 HOH A 140 640 10 HOH HOH . J 8 HOH A 141 641 5 HOH HOH . J 8 HOH A 142 642 65 HOH HOH . J 8 HOH A 143 643 133 HOH HOH . J 8 HOH A 144 644 209 HOH HOH . J 8 HOH A 145 645 197 HOH HOH . J 8 HOH A 146 646 42 HOH HOH . J 8 HOH A 147 647 219 HOH HOH . J 8 HOH A 148 648 40 HOH HOH . J 8 HOH A 149 649 20 HOH HOH . J 8 HOH A 150 650 45 HOH HOH . J 8 HOH A 151 651 53 HOH HOH . J 8 HOH A 152 652 270 HOH HOH . J 8 HOH A 153 653 120 HOH HOH . J 8 HOH A 154 654 36 HOH HOH . J 8 HOH A 155 655 48 HOH HOH . J 8 HOH A 156 656 292 HOH HOH . J 8 HOH A 157 657 72 HOH HOH . J 8 HOH A 158 658 184 HOH HOH . J 8 HOH A 159 659 79 HOH HOH . J 8 HOH A 160 660 111 HOH HOH . J 8 HOH A 161 661 97 HOH HOH . J 8 HOH A 162 662 17 HOH HOH . J 8 HOH A 163 663 74 HOH HOH . J 8 HOH A 164 664 206 HOH HOH . J 8 HOH A 165 665 69 HOH HOH . J 8 HOH A 166 666 119 HOH HOH . J 8 HOH A 167 667 159 HOH HOH . J 8 HOH A 168 668 186 HOH HOH . J 8 HOH A 169 669 234 HOH HOH . J 8 HOH A 170 670 50 HOH HOH . J 8 HOH A 171 671 59 HOH HOH . J 8 HOH A 172 672 236 HOH HOH . J 8 HOH A 173 673 191 HOH HOH . J 8 HOH A 174 674 153 HOH HOH . J 8 HOH A 175 675 245 HOH HOH . J 8 HOH A 176 676 51 HOH HOH . J 8 HOH A 177 677 22 HOH HOH . J 8 HOH A 178 678 30 HOH HOH . J 8 HOH A 179 679 138 HOH HOH . J 8 HOH A 180 680 88 HOH HOH . J 8 HOH A 181 681 244 HOH HOH . J 8 HOH A 182 682 189 HOH HOH . J 8 HOH A 183 683 77 HOH HOH . J 8 HOH A 184 684 76 HOH HOH . J 8 HOH A 185 685 64 HOH HOH . J 8 HOH A 186 686 84 HOH HOH . J 8 HOH A 187 687 89 HOH HOH . J 8 HOH A 188 688 128 HOH HOH . J 8 HOH A 189 689 99 HOH HOH . J 8 HOH A 190 690 9 HOH HOH . J 8 HOH A 191 691 102 HOH HOH . J 8 HOH A 192 692 201 HOH HOH . J 8 HOH A 193 693 134 HOH HOH . J 8 HOH A 194 694 261 HOH HOH . J 8 HOH A 195 695 196 HOH HOH . J 8 HOH A 196 696 256 HOH HOH . J 8 HOH A 197 697 95 HOH HOH . J 8 HOH A 198 698 94 HOH HOH . J 8 HOH A 199 699 293 HOH HOH . J 8 HOH A 200 700 11 HOH HOH . J 8 HOH A 201 701 291 HOH HOH . J 8 HOH A 202 702 258 HOH HOH . J 8 HOH A 203 703 265 HOH HOH . J 8 HOH A 204 704 152 HOH HOH . J 8 HOH A 205 705 109 HOH HOH . J 8 HOH A 206 706 259 HOH HOH . J 8 HOH A 207 707 202 HOH HOH . J 8 HOH A 208 708 73 HOH HOH . J 8 HOH A 209 709 164 HOH HOH . J 8 HOH A 210 710 146 HOH HOH . J 8 HOH A 211 711 170 HOH HOH . J 8 HOH A 212 712 151 HOH HOH . J 8 HOH A 213 713 63 HOH HOH . J 8 HOH A 214 714 147 HOH HOH . J 8 HOH A 215 715 166 HOH HOH . J 8 HOH A 216 716 266 HOH HOH . J 8 HOH A 217 717 251 HOH HOH . J 8 HOH A 218 718 78 HOH HOH . J 8 HOH A 219 719 114 HOH HOH . J 8 HOH A 220 720 237 HOH HOH . J 8 HOH A 221 721 273 HOH HOH . J 8 HOH A 222 722 160 HOH HOH . J 8 HOH A 223 723 260 HOH HOH . J 8 HOH A 224 724 145 HOH HOH . J 8 HOH A 225 725 165 HOH HOH . J 8 HOH A 226 726 290 HOH HOH . J 8 HOH A 227 727 168 HOH HOH . J 8 HOH A 228 728 285 HOH HOH . J 8 HOH A 229 729 249 HOH HOH . J 8 HOH A 230 730 173 HOH HOH . J 8 HOH A 231 731 172 HOH HOH . J 8 HOH A 232 732 171 HOH HOH . J 8 HOH A 233 733 175 HOH HOH . J 8 HOH A 234 734 174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . A . D 3 29.163 19.912 49.77 0.24 20.31 ? C1 GOL 403 A 1 HETATM 2 C C1 GOL . B . D 3 29.506 19.805 49.623 0.76 32.58 ? C1 GOL 403 A 1 HETATM 3 O O1 GOL . A . D 3 27.916 19.334 50.081 0.24 19.22 ? O1 GOL 403 A 1 HETATM 4 O O1 GOL . B . D 3 29.316 21.037 48.949 0.76 29.36 ? O1 GOL 403 A 1 HETATM 5 C C2 GOL . A . D 3 29.948 20.14 51.052 0.24 20.52 ? C2 GOL 403 A 1 HETATM 6 C C2 GOL . B . D 3 30.383 20.035 50.843 0.76 35.1 ? C2 GOL 403 A 1 HETATM 7 O O2 GOL . A . D 3 29.137 20.855 51.956 0.24 21.1 ? O2 GOL 403 A 1 HETATM 8 O O2 GOL . B . D 3 30.003 21.241 51.461 0.76 36.29 ? O2 GOL 403 A 1 HETATM 9 C C3 GOL . A . D 3 30.277 18.793 51.679 0.24 19.93 ? C3 GOL 403 A 1 HETATM 10 C C3 GOL . B . D 3 30.195 18.894 51.836 0.76 35.92 ? C3 GOL 403 A 1 HETATM 11 O O3 GOL . A . D 3 29.125 18.335 52.347 0.24 19.11 ? O3 GOL 403 A 1 HETATM 12 O O3 GOL . B . D 3 28.94 19.034 52.462 0.76 36.33 ? O3 GOL 403 A 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #