data_5HEB
#
_model_server_result.job_id            '_BM7otkNSIlHH49Dyr_-nQ' 
_model_server_result.datetime_utc      '2024-10-21 01:52:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5heb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    5HEB 
#
_exptl.entry_id    5HEB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5HEB 
_cell.length_a            89.771 
_cell.length_b            89.771 
_cell.length_c            89.771 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5HEB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        213 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 116 n n 
C1 C2 GOL sing 117 n n 
C1 H11 GOL sing 118 n n 
C1 H12 GOL sing 119 n n 
O1 HO1 GOL sing 120 n n 
C2 O2 GOL sing 121 n n 
C2 C3 GOL sing 122 n n 
C2 H2 GOL sing 123 n n 
O2 HO2 GOL sing 124 n n 
C3 O3 GOL sing 125 n n 
C3 H31 GOL sing 126 n n 
C3 H32 GOL sing 127 n n 
O3 HO3 GOL sing 128 n n 
#
_atom_sites.entry_id                     5HEB 
_atom_sites.fract_transf_matrix[1][1]    0.011139 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011139 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011139 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 501 2 GOL GOL . 
D 3 GOL B 1 101 1 GOL GOL . 
E 4 HOH A 1 601 121 HOH HOH . 
E 4 HOH A 2 602 74 HOH HOH . 
E 4 HOH A 3 603 79 HOH HOH . 
E 4 HOH A 4 604 75 HOH HOH . 
E 4 HOH A 5 605 21 HOH HOH . 
E 4 HOH A 6 606 108 HOH HOH . 
E 4 HOH A 7 607 99 HOH HOH . 
E 4 HOH A 8 608 58 HOH HOH . 
E 4 HOH A 9 609 123 HOH HOH . 
E 4 HOH A 10 610 45 HOH HOH . 
E 4 HOH A 11 611 122 HOH HOH . 
E 4 HOH A 12 612 65 HOH HOH . 
E 4 HOH A 13 613 4 HOH HOH . 
E 4 HOH A 14 614 71 HOH HOH . 
E 4 HOH A 15 615 70 HOH HOH . 
E 4 HOH A 16 616 103 HOH HOH . 
E 4 HOH A 17 617 53 HOH HOH . 
E 4 HOH A 18 618 3 HOH HOH . 
E 4 HOH A 19 619 72 HOH HOH . 
E 4 HOH A 20 620 35 HOH HOH . 
E 4 HOH A 21 621 38 HOH HOH . 
E 4 HOH A 22 622 6 HOH HOH . 
E 4 HOH A 23 623 29 HOH HOH . 
E 4 HOH A 24 624 87 HOH HOH . 
E 4 HOH A 25 625 15 HOH HOH . 
E 4 HOH A 26 626 17 HOH HOH . 
E 4 HOH A 27 627 26 HOH HOH . 
E 4 HOH A 28 628 80 HOH HOH . 
E 4 HOH A 29 629 16 HOH HOH . 
E 4 HOH A 30 630 1 HOH HOH . 
E 4 HOH A 31 631 41 HOH HOH . 
E 4 HOH A 32 632 64 HOH HOH . 
E 4 HOH A 33 633 7 HOH HOH . 
E 4 HOH A 34 634 57 HOH HOH . 
E 4 HOH A 35 635 30 HOH HOH . 
E 4 HOH A 36 636 68 HOH HOH . 
E 4 HOH A 37 637 36 HOH HOH . 
E 4 HOH A 38 638 12 HOH HOH . 
E 4 HOH A 39 639 97 HOH HOH . 
E 4 HOH A 40 640 44 HOH HOH . 
E 4 HOH A 41 641 54 HOH HOH . 
E 4 HOH A 42 642 100 HOH HOH . 
E 4 HOH A 43 643 46 HOH HOH . 
E 4 HOH A 44 644 104 HOH HOH . 
E 4 HOH A 45 645 69 HOH HOH . 
E 4 HOH A 46 646 59 HOH HOH . 
E 4 HOH A 47 647 43 HOH HOH . 
E 4 HOH A 48 648 11 HOH HOH . 
E 4 HOH A 49 649 83 HOH HOH . 
E 4 HOH A 50 650 37 HOH HOH . 
E 4 HOH A 51 651 24 HOH HOH . 
E 4 HOH A 52 652 8 HOH HOH . 
E 4 HOH A 53 653 111 HOH HOH . 
E 4 HOH A 54 654 13 HOH HOH . 
E 4 HOH A 55 655 107 HOH HOH . 
E 4 HOH A 56 656 110 HOH HOH . 
E 4 HOH A 57 657 117 HOH HOH . 
E 4 HOH A 58 658 42 HOH HOH . 
E 4 HOH A 59 659 9 HOH HOH . 
E 4 HOH A 60 660 93 HOH HOH . 
E 4 HOH A 61 661 31 HOH HOH . 
E 4 HOH A 62 662 27 HOH HOH . 
E 4 HOH A 63 663 91 HOH HOH . 
E 4 HOH A 64 664 34 HOH HOH . 
E 4 HOH A 65 665 90 HOH HOH . 
E 4 HOH A 66 666 101 HOH HOH . 
E 4 HOH A 67 667 55 HOH HOH . 
E 4 HOH A 68 668 20 HOH HOH . 
E 4 HOH A 69 669 28 HOH HOH . 
E 4 HOH A 70 670 5 HOH HOH . 
E 4 HOH A 71 671 47 HOH HOH . 
E 4 HOH A 72 672 48 HOH HOH . 
E 4 HOH A 73 673 77 HOH HOH . 
E 4 HOH A 74 674 32 HOH HOH . 
E 4 HOH A 75 675 39 HOH HOH . 
E 4 HOH A 76 676 67 HOH HOH . 
E 4 HOH A 77 677 113 HOH HOH . 
E 4 HOH A 78 678 120 HOH HOH . 
E 4 HOH A 79 679 23 HOH HOH . 
E 4 HOH A 80 680 88 HOH HOH . 
E 4 HOH A 81 681 33 HOH HOH . 
E 4 HOH A 82 682 81 HOH HOH . 
E 4 HOH A 83 683 98 HOH HOH . 
E 4 HOH A 84 684 2 HOH HOH . 
E 4 HOH A 85 685 51 HOH HOH . 
E 4 HOH A 86 686 85 HOH HOH . 
E 4 HOH A 87 687 61 HOH HOH . 
E 4 HOH A 88 688 62 HOH HOH . 
E 4 HOH A 89 689 60 HOH HOH . 
E 4 HOH A 90 690 10 HOH HOH . 
E 4 HOH A 91 691 106 HOH HOH . 
E 4 HOH A 92 692 125 HOH HOH . 
E 4 HOH A 93 693 76 HOH HOH . 
E 4 HOH A 94 694 119 HOH HOH . 
E 4 HOH A 95 695 73 HOH HOH . 
E 4 HOH A 96 696 82 HOH HOH . 
E 4 HOH A 97 697 126 HOH HOH . 
E 4 HOH A 98 698 22 HOH HOH . 
E 4 HOH A 99 699 63 HOH HOH . 
E 4 HOH A 100 700 109 HOH HOH . 
E 4 HOH A 101 701 14 HOH HOH . 
E 4 HOH A 102 702 102 HOH HOH . 
E 4 HOH A 103 703 94 HOH HOH . 
E 4 HOH A 104 704 56 HOH HOH . 
E 4 HOH A 105 705 95 HOH HOH . 
E 4 HOH A 106 706 89 HOH HOH . 
E 4 HOH A 107 707 86 HOH HOH . 
E 4 HOH A 108 708 115 HOH HOH . 
E 4 HOH A 109 709 78 HOH HOH . 
E 4 HOH A 110 710 66 HOH HOH . 
E 4 HOH A 111 711 84 HOH HOH . 
E 4 HOH A 112 712 92 HOH HOH . 
E 4 HOH A 113 713 116 HOH HOH . 
F 4 HOH B 1 201 52 HOH HOH . 
F 4 HOH B 2 202 40 HOH HOH . 
F 4 HOH B 3 203 19 HOH HOH . 
F 4 HOH B 4 204 124 HOH HOH . 
F 4 HOH B 5 205 50 HOH HOH . 
F 4 HOH B 6 206 49 HOH HOH . 
F 4 HOH B 7 207 18 HOH HOH . 
F 4 HOH B 8 208 112 HOH HOH . 
F 4 HOH B 9 209 25 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 54.177 47.74 27.17 1 54.67 ? C1 GOL 501 A 1 
HETATM 2 O O1 GOL . . . C 3 53.381 48.902 27.293 1 26.66 ? O1 GOL 501 A 1 
HETATM 3 C C2 GOL . . . C 3 55.574 48.074 26.661 1 68.08 ? C2 GOL 501 A 1 
HETATM 4 O O2 GOL . . . C 3 56.368 48.584 27.71 1 71.59 ? O2 GOL 501 A 1 
HETATM 5 C C3 GOL . . . C 3 56.219 46.821 26.08 1 78.32 ? C3 GOL 501 A 1 
HETATM 6 O O3 GOL . . . C 3 57.46 47.143 25.493 1 81.15 ? O3 GOL 501 A 1 
HETATM 7 H H11 GOL . . . C 3 53.698 47.044 26.482 1 65.6 ? H11 GOL 501 A 1 
HETATM 8 H H12 GOL . . . C 3 54.254 47.25 28.141 1 65.6 ? H12 GOL 501 A 1 
HETATM 9 H HO1 GOL . . . C 3 52.472 48.649 27.558 1 32 ? HO1 GOL 501 A 1 
HETATM 10 H H2 GOL . . . C 3 55.487 48.819 25.87 1 81.7 ? H2 GOL 501 A 1 
HETATM 11 H HO2 GOL . . . C 3 56.461 47.904 28.409 1 85.91 ? HO2 GOL 501 A 1 
HETATM 12 H H31 GOL . . . C 3 56.367 46.084 26.869 1 93.98 ? H31 GOL 501 A 1 
HETATM 13 H H32 GOL . . . C 3 55.561 46.384 25.328 1 93.98 ? H32 GOL 501 A 1 
HETATM 14 H HO3 GOL . . . C 3 57.972 47.714 26.104 1 97.38 ? HO3 GOL 501 A 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           247 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           14 
#