data_5HEM
#
_model_server_result.job_id            eO5mNuV139je97u4R7iFPA 
_model_server_result.datetime_utc      '2024-10-18 23:32:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5hem 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    5HEM 
#
_exptl.entry_id    5HEM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5HEM 
_cell.length_a            68.73 
_cell.length_b            68.73 
_cell.length_c            113.364 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5HEM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,K 1 1 
B,I,J,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 K O HOH . A HOH 331 1_555 I MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc2 K O HOH . A HOH 338 1_555 I MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? 
metalc ? metalc3 B O TYR 85 B TYR 153 1_555 I MG MG . B MG 201 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc4 B O ILE 86 B ILE 154 1_555 I MG MG . B MG 201 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? 
metalc ? metalc5 B O ASN 88 B ASN 156 1_555 I MG MG . B MG 201 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 89 n n 
C1 C2 EDO sing 90 n n 
C1 H11 EDO sing 91 n n 
C1 H12 EDO sing 92 n n 
O1 HO1 EDO sing 93 n n 
C2 O2 EDO sing 94 n n 
C2 H21 EDO sing 95 n n 
C2 H22 EDO sing 96 n n 
O2 HO2 EDO sing 97 n n 
#
_atom_sites.entry_id                     5HEM 
_atom_sites.fract_transf_matrix[1][1]    0.01455 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01455 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008821 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 201 1 EDO EDO . 
D 2 EDO A 1 202 2 EDO EDO . 
E 2 EDO A 1 203 3 EDO EDO . 
F 2 EDO A 1 204 4 EDO EDO . 
G 2 EDO A 1 205 6 EDO EDO . 
H 3 ACT A 1 206 1 ACT ACT . 
I 4 MG B 1 201 1 MG MG . 
J 3 ACT B 1 202 2 ACT ACT . 
K 5 HOH A 1 301 131 HOH HOH . 
K 5 HOH A 2 302 124 HOH HOH . 
K 5 HOH A 3 303 114 HOH HOH . 
K 5 HOH A 4 304 55 HOH HOH . 
K 5 HOH A 5 305 61 HOH HOH . 
K 5 HOH A 6 306 25 HOH HOH . 
K 5 HOH A 7 307 79 HOH HOH . 
K 5 HOH A 8 308 189 HOH HOH . 
K 5 HOH A 9 309 108 HOH HOH . 
K 5 HOH A 10 310 198 HOH HOH . 
K 5 HOH A 11 311 202 HOH HOH . 
K 5 HOH A 12 312 78 HOH HOH . 
K 5 HOH A 13 313 42 HOH HOH . 
K 5 HOH A 14 314 86 HOH HOH . 
K 5 HOH A 15 315 47 HOH HOH . 
K 5 HOH A 16 316 16 HOH HOH . 
K 5 HOH A 17 317 90 HOH HOH . 
K 5 HOH A 18 318 30 HOH HOH . 
K 5 HOH A 19 319 188 HOH HOH . 
K 5 HOH A 20 320 87 HOH HOH . 
K 5 HOH A 21 321 89 HOH HOH . 
K 5 HOH A 22 322 137 HOH HOH . 
K 5 HOH A 23 323 58 HOH HOH . 
K 5 HOH A 24 324 18 HOH HOH . 
K 5 HOH A 25 325 184 HOH HOH . 
K 5 HOH A 26 326 6 HOH HOH . 
K 5 HOH A 27 327 46 HOH HOH . 
K 5 HOH A 28 328 85 HOH HOH . 
K 5 HOH A 29 329 203 HOH HOH . 
K 5 HOH A 30 330 70 HOH HOH . 
K 5 HOH A 31 331 166 HOH HOH . 
K 5 HOH A 32 332 104 HOH HOH . 
K 5 HOH A 33 333 56 HOH HOH . 
K 5 HOH A 34 334 113 HOH HOH . 
K 5 HOH A 35 335 127 HOH HOH . 
K 5 HOH A 36 336 9 HOH HOH . 
K 5 HOH A 37 337 80 HOH HOH . 
K 5 HOH A 38 338 1 HOH HOH . 
K 5 HOH A 39 339 12 HOH HOH . 
K 5 HOH A 40 340 173 HOH HOH . 
K 5 HOH A 41 341 29 HOH HOH . 
K 5 HOH A 42 342 3 HOH HOH . 
K 5 HOH A 43 343 191 HOH HOH . 
K 5 HOH A 44 344 136 HOH HOH . 
K 5 HOH A 45 345 40 HOH HOH . 
K 5 HOH A 46 346 107 HOH HOH . 
K 5 HOH A 47 347 73 HOH HOH . 
K 5 HOH A 48 348 45 HOH HOH . 
K 5 HOH A 49 349 51 HOH HOH . 
K 5 HOH A 50 350 69 HOH HOH . 
K 5 HOH A 51 351 174 HOH HOH . 
K 5 HOH A 52 352 170 HOH HOH . 
K 5 HOH A 53 353 119 HOH HOH . 
K 5 HOH A 54 354 22 HOH HOH . 
K 5 HOH A 55 355 64 HOH HOH . 
K 5 HOH A 56 356 33 HOH HOH . 
K 5 HOH A 57 357 109 HOH HOH . 
K 5 HOH A 58 358 116 HOH HOH . 
K 5 HOH A 59 359 23 HOH HOH . 
K 5 HOH A 60 360 151 HOH HOH . 
K 5 HOH A 61 361 53 HOH HOH . 
K 5 HOH A 62 362 63 HOH HOH . 
K 5 HOH A 63 363 48 HOH HOH . 
K 5 HOH A 64 364 120 HOH HOH . 
K 5 HOH A 65 365 82 HOH HOH . 
K 5 HOH A 66 366 26 HOH HOH . 
K 5 HOH A 67 367 24 HOH HOH . 
K 5 HOH A 68 368 193 HOH HOH . 
K 5 HOH A 69 369 196 HOH HOH . 
K 5 HOH A 70 370 83 HOH HOH . 
K 5 HOH A 71 371 135 HOH HOH . 
K 5 HOH A 72 372 17 HOH HOH . 
K 5 HOH A 73 373 142 HOH HOH . 
K 5 HOH A 74 374 13 HOH HOH . 
K 5 HOH A 75 375 134 HOH HOH . 
K 5 HOH A 76 376 185 HOH HOH . 
K 5 HOH A 77 377 15 HOH HOH . 
K 5 HOH A 78 378 41 HOH HOH . 
K 5 HOH A 79 379 100 HOH HOH . 
K 5 HOH A 80 380 98 HOH HOH . 
K 5 HOH A 81 381 105 HOH HOH . 
K 5 HOH A 82 382 52 HOH HOH . 
K 5 HOH A 83 383 211 HOH HOH . 
K 5 HOH A 84 384 49 HOH HOH . 
K 5 HOH A 85 385 123 HOH HOH . 
K 5 HOH A 86 386 19 HOH HOH . 
K 5 HOH A 87 387 10 HOH HOH . 
K 5 HOH A 88 388 93 HOH HOH . 
K 5 HOH A 89 389 130 HOH HOH . 
K 5 HOH A 90 390 118 HOH HOH . 
K 5 HOH A 91 391 60 HOH HOH . 
K 5 HOH A 92 392 148 HOH HOH . 
K 5 HOH A 93 393 164 HOH HOH . 
K 5 HOH A 94 394 204 HOH HOH . 
K 5 HOH A 95 395 97 HOH HOH . 
K 5 HOH A 96 396 171 HOH HOH . 
K 5 HOH A 97 397 213 HOH HOH . 
K 5 HOH A 98 398 112 HOH HOH . 
K 5 HOH A 99 399 187 HOH HOH . 
K 5 HOH A 100 400 165 HOH HOH . 
K 5 HOH A 101 401 192 HOH HOH . 
K 5 HOH A 102 402 156 HOH HOH . 
K 5 HOH A 103 403 154 HOH HOH . 
K 5 HOH A 104 404 167 HOH HOH . 
K 5 HOH A 105 405 67 HOH HOH . 
K 5 HOH A 106 406 194 HOH HOH . 
K 5 HOH A 107 407 157 HOH HOH . 
K 5 HOH A 108 408 186 HOH HOH . 
K 5 HOH A 109 409 178 HOH HOH . 
K 5 HOH A 110 410 72 HOH HOH . 
K 5 HOH A 111 411 177 HOH HOH . 
K 5 HOH A 112 412 209 HOH HOH . 
K 5 HOH A 113 413 210 HOH HOH . 
K 5 HOH A 114 414 125 HOH HOH . 
K 5 HOH A 115 415 102 HOH HOH . 
K 5 HOH A 116 416 172 HOH HOH . 
K 5 HOH A 117 417 128 HOH HOH . 
K 5 HOH A 118 418 103 HOH HOH . 
K 5 HOH A 119 419 84 HOH HOH . 
K 5 HOH A 120 420 179 HOH HOH . 
K 5 HOH A 121 421 200 HOH HOH . 
K 5 HOH A 122 422 139 HOH HOH . 
K 5 HOH A 123 423 66 HOH HOH . 
K 5 HOH A 124 424 149 HOH HOH . 
K 5 HOH A 125 425 129 HOH HOH . 
K 5 HOH A 126 426 54 HOH HOH . 
K 5 HOH A 127 427 122 HOH HOH . 
K 5 HOH A 128 428 43 HOH HOH . 
K 5 HOH A 129 429 163 HOH HOH . 
K 5 HOH A 130 430 160 HOH HOH . 
K 5 HOH A 131 431 77 HOH HOH . 
L 5 HOH B 1 301 14 HOH HOH . 
L 5 HOH B 2 302 199 HOH HOH . 
L 5 HOH B 3 303 76 HOH HOH . 
L 5 HOH B 4 304 11 HOH HOH . 
L 5 HOH B 5 305 126 HOH HOH . 
L 5 HOH B 6 306 57 HOH HOH . 
L 5 HOH B 7 307 111 HOH HOH . 
L 5 HOH B 8 308 21 HOH HOH . 
L 5 HOH B 9 309 110 HOH HOH . 
L 5 HOH B 10 310 132 HOH HOH . 
L 5 HOH B 11 311 37 HOH HOH . 
L 5 HOH B 12 312 168 HOH HOH . 
L 5 HOH B 13 313 62 HOH HOH . 
L 5 HOH B 14 314 50 HOH HOH . 
L 5 HOH B 15 315 201 HOH HOH . 
L 5 HOH B 16 316 31 HOH HOH . 
L 5 HOH B 17 317 117 HOH HOH . 
L 5 HOH B 18 318 7 HOH HOH . 
L 5 HOH B 19 319 101 HOH HOH . 
L 5 HOH B 20 320 96 HOH HOH . 
L 5 HOH B 21 321 32 HOH HOH . 
L 5 HOH B 22 322 88 HOH HOH . 
L 5 HOH B 23 323 147 HOH HOH . 
L 5 HOH B 24 324 5 HOH HOH . 
L 5 HOH B 25 325 115 HOH HOH . 
L 5 HOH B 26 326 4 HOH HOH . 
L 5 HOH B 27 327 95 HOH HOH . 
L 5 HOH B 28 328 214 HOH HOH . 
L 5 HOH B 29 329 34 HOH HOH . 
L 5 HOH B 30 330 197 HOH HOH . 
L 5 HOH B 31 331 59 HOH HOH . 
L 5 HOH B 32 332 205 HOH HOH . 
L 5 HOH B 33 333 71 HOH HOH . 
L 5 HOH B 34 334 181 HOH HOH . 
L 5 HOH B 35 335 39 HOH HOH . 
L 5 HOH B 36 336 182 HOH HOH . 
L 5 HOH B 37 337 74 HOH HOH . 
L 5 HOH B 38 338 20 HOH HOH . 
L 5 HOH B 39 339 153 HOH HOH . 
L 5 HOH B 40 340 68 HOH HOH . 
L 5 HOH B 41 341 183 HOH HOH . 
L 5 HOH B 42 342 138 HOH HOH . 
L 5 HOH B 43 343 133 HOH HOH . 
L 5 HOH B 44 344 195 HOH HOH . 
L 5 HOH B 45 345 28 HOH HOH . 
L 5 HOH B 46 346 38 HOH HOH . 
L 5 HOH B 47 347 8 HOH HOH . 
L 5 HOH B 48 348 94 HOH HOH . 
L 5 HOH B 49 349 35 HOH HOH . 
L 5 HOH B 50 350 99 HOH HOH . 
L 5 HOH B 51 351 152 HOH HOH . 
L 5 HOH B 52 352 27 HOH HOH . 
L 5 HOH B 53 353 175 HOH HOH . 
L 5 HOH B 54 354 75 HOH HOH . 
L 5 HOH B 55 355 121 HOH HOH . 
L 5 HOH B 56 356 65 HOH HOH . 
L 5 HOH B 57 357 155 HOH HOH . 
L 5 HOH B 58 358 44 HOH HOH . 
L 5 HOH B 59 359 141 HOH HOH . 
L 5 HOH B 60 360 145 HOH HOH . 
L 5 HOH B 61 361 36 HOH HOH . 
L 5 HOH B 62 362 81 HOH HOH . 
L 5 HOH B 63 363 2 HOH HOH . 
L 5 HOH B 64 364 146 HOH HOH . 
L 5 HOH B 65 365 212 HOH HOH . 
L 5 HOH B 66 366 169 HOH HOH . 
L 5 HOH B 67 367 150 HOH HOH . 
L 5 HOH B 68 368 206 HOH HOH . 
L 5 HOH B 69 369 162 HOH HOH . 
L 5 HOH B 70 370 208 HOH HOH . 
L 5 HOH B 71 371 180 HOH HOH . 
L 5 HOH B 72 372 159 HOH HOH . 
L 5 HOH B 73 373 190 HOH HOH . 
L 5 HOH B 74 374 176 HOH HOH . 
L 5 HOH B 75 375 207 HOH HOH . 
L 5 HOH B 76 376 144 HOH HOH . 
L 5 HOH B 77 377 106 HOH HOH . 
L 5 HOH B 78 378 143 HOH HOH . 
L 5 HOH B 79 379 158 HOH HOH . 
L 5 HOH B 80 380 161 HOH HOH . 
L 5 HOH B 81 381 91 HOH HOH . 
L 5 HOH B 82 382 92 HOH HOH . 
L 5 HOH B 83 383 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 2 24.962 -15.654 -12.226 1 22.39 ? C1 EDO 201 A 1 
HETATM 2 O O1 EDO . . . C 2 24.182 -15.842 -13.396 1 18.19 ? O1 EDO 201 A 1 
HETATM 3 C C2 EDO . . . C 2 25.936 -16.756 -11.88 1 23.86 ? C2 EDO 201 A 1 
HETATM 4 O O2 EDO . . . C 2 26.639 -17.297 -12.987 1 23.34 ? O2 EDO 201 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#