data_5HEN # _model_server_result.job_id epME8bFNcD2s0u8Hw7OOmw _model_server_result.datetime_utc '2025-03-21 05:05:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hen # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 5HEN # _exptl.entry_id 5HEN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.76 _cell.angle_gamma 90 _cell.entry_id 5HEN _cell.length_a 115.381 _cell.length_b 55.757 _cell.length_c 68.451 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HEN _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1 B,E,H 2 1 C,F,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 5HEN _atom_sites.fract_transf_matrix[1][1] 0.008667 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000721 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017935 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014659 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 EDO A 1 201 3 EDO EDO . E 2 EDO B 1 201 2 EDO EDO . F 2 EDO C 1 201 1 EDO EDO . G 3 HOH A 1 301 93 HOH HOH . G 3 HOH A 2 302 53 HOH HOH . G 3 HOH A 3 303 29 HOH HOH . G 3 HOH A 4 304 10 HOH HOH . G 3 HOH A 5 305 59 HOH HOH . G 3 HOH A 6 306 70 HOH HOH . G 3 HOH A 7 307 118 HOH HOH . G 3 HOH A 8 308 54 HOH HOH . G 3 HOH A 9 309 87 HOH HOH . G 3 HOH A 10 310 77 HOH HOH . G 3 HOH A 11 311 32 HOH HOH . G 3 HOH A 12 312 39 HOH HOH . G 3 HOH A 13 313 117 HOH HOH . G 3 HOH A 14 314 9 HOH HOH . G 3 HOH A 15 315 67 HOH HOH . G 3 HOH A 16 316 65 HOH HOH . G 3 HOH A 17 317 8 HOH HOH . G 3 HOH A 18 318 86 HOH HOH . G 3 HOH A 19 319 43 HOH HOH . G 3 HOH A 20 320 33 HOH HOH . G 3 HOH A 21 321 58 HOH HOH . G 3 HOH A 22 322 79 HOH HOH . G 3 HOH A 23 323 24 HOH HOH . G 3 HOH A 24 324 3 HOH HOH . G 3 HOH A 25 325 17 HOH HOH . G 3 HOH A 26 326 148 HOH HOH . G 3 HOH A 27 327 35 HOH HOH . G 3 HOH A 28 328 60 HOH HOH . G 3 HOH A 29 329 134 HOH HOH . G 3 HOH A 30 330 49 HOH HOH . G 3 HOH A 31 331 7 HOH HOH . G 3 HOH A 32 332 90 HOH HOH . G 3 HOH A 33 333 23 HOH HOH . G 3 HOH A 34 334 113 HOH HOH . G 3 HOH A 35 335 85 HOH HOH . G 3 HOH A 36 336 142 HOH HOH . G 3 HOH A 37 337 145 HOH HOH . G 3 HOH A 38 338 101 HOH HOH . G 3 HOH A 39 339 120 HOH HOH . G 3 HOH A 40 340 74 HOH HOH . G 3 HOH A 41 341 55 HOH HOH . G 3 HOH A 42 342 119 HOH HOH . G 3 HOH A 43 343 81 HOH HOH . G 3 HOH A 44 344 16 HOH HOH . G 3 HOH A 45 345 31 HOH HOH . G 3 HOH A 46 346 42 HOH HOH . G 3 HOH A 47 347 1 HOH HOH . G 3 HOH A 48 348 128 HOH HOH . G 3 HOH A 49 349 143 HOH HOH . G 3 HOH A 50 350 40 HOH HOH . G 3 HOH A 51 351 30 HOH HOH . G 3 HOH A 52 352 139 HOH HOH . G 3 HOH A 53 353 127 HOH HOH . G 3 HOH A 54 354 6 HOH HOH . G 3 HOH A 55 355 104 HOH HOH . G 3 HOH A 56 356 75 HOH HOH . G 3 HOH A 57 357 102 HOH HOH . G 3 HOH A 58 358 83 HOH HOH . G 3 HOH A 59 359 110 HOH HOH . G 3 HOH A 60 360 123 HOH HOH . G 3 HOH A 61 361 48 HOH HOH . G 3 HOH A 62 362 95 HOH HOH . G 3 HOH A 63 363 112 HOH HOH . G 3 HOH A 64 364 80 HOH HOH . H 3 HOH B 1 301 82 HOH HOH . H 3 HOH B 2 302 46 HOH HOH . H 3 HOH B 3 303 97 HOH HOH . H 3 HOH B 4 304 62 HOH HOH . H 3 HOH B 5 305 121 HOH HOH . H 3 HOH B 6 306 52 HOH HOH . H 3 HOH B 7 307 73 HOH HOH . H 3 HOH B 8 308 147 HOH HOH . H 3 HOH B 9 309 47 HOH HOH . H 3 HOH B 10 310 15 HOH HOH . H 3 HOH B 11 311 25 HOH HOH . H 3 HOH B 12 312 45 HOH HOH . H 3 HOH B 13 313 69 HOH HOH . H 3 HOH B 14 314 109 HOH HOH . H 3 HOH B 15 315 50 HOH HOH . H 3 HOH B 16 316 57 HOH HOH . H 3 HOH B 17 317 114 HOH HOH . H 3 HOH B 18 318 5 HOH HOH . H 3 HOH B 19 319 26 HOH HOH . H 3 HOH B 20 320 68 HOH HOH . H 3 HOH B 21 321 61 HOH HOH . H 3 HOH B 22 322 20 HOH HOH . H 3 HOH B 23 323 91 HOH HOH . H 3 HOH B 24 324 38 HOH HOH . H 3 HOH B 25 325 96 HOH HOH . H 3 HOH B 26 326 41 HOH HOH . H 3 HOH B 27 327 141 HOH HOH . H 3 HOH B 28 328 2 HOH HOH . H 3 HOH B 29 329 11 HOH HOH . H 3 HOH B 30 330 76 HOH HOH . H 3 HOH B 31 331 133 HOH HOH . H 3 HOH B 32 332 146 HOH HOH . H 3 HOH B 33 333 19 HOH HOH . H 3 HOH B 34 334 64 HOH HOH . H 3 HOH B 35 335 51 HOH HOH . H 3 HOH B 36 336 66 HOH HOH . H 3 HOH B 37 337 107 HOH HOH . H 3 HOH B 38 338 94 HOH HOH . H 3 HOH B 39 339 144 HOH HOH . H 3 HOH B 40 340 56 HOH HOH . H 3 HOH B 41 341 72 HOH HOH . H 3 HOH B 42 342 84 HOH HOH . H 3 HOH B 43 343 28 HOH HOH . H 3 HOH B 44 344 14 HOH HOH . H 3 HOH B 45 345 12 HOH HOH . H 3 HOH B 46 346 18 HOH HOH . H 3 HOH B 47 347 126 HOH HOH . H 3 HOH B 48 348 129 HOH HOH . H 3 HOH B 49 349 132 HOH HOH . H 3 HOH B 50 350 140 HOH HOH . H 3 HOH B 51 351 103 HOH HOH . H 3 HOH B 52 352 105 HOH HOH . H 3 HOH B 53 353 88 HOH HOH . H 3 HOH B 54 354 13 HOH HOH . H 3 HOH B 55 355 124 HOH HOH . H 3 HOH B 56 356 27 HOH HOH . H 3 HOH B 57 357 131 HOH HOH . I 3 HOH C 1 301 135 HOH HOH . I 3 HOH C 2 302 22 HOH HOH . I 3 HOH C 3 303 36 HOH HOH . I 3 HOH C 4 304 89 HOH HOH . I 3 HOH C 5 305 34 HOH HOH . I 3 HOH C 6 306 115 HOH HOH . I 3 HOH C 7 307 138 HOH HOH . I 3 HOH C 8 308 21 HOH HOH . I 3 HOH C 9 309 44 HOH HOH . I 3 HOH C 10 310 116 HOH HOH . I 3 HOH C 11 311 37 HOH HOH . I 3 HOH C 12 312 4 HOH HOH . I 3 HOH C 13 313 99 HOH HOH . I 3 HOH C 14 314 106 HOH HOH . I 3 HOH C 15 315 136 HOH HOH . I 3 HOH C 16 316 63 HOH HOH . I 3 HOH C 17 317 71 HOH HOH . I 3 HOH C 18 318 111 HOH HOH . I 3 HOH C 19 319 122 HOH HOH . I 3 HOH C 20 320 137 HOH HOH . I 3 HOH C 21 321 78 HOH HOH . I 3 HOH C 22 322 108 HOH HOH . I 3 HOH C 23 323 100 HOH HOH . I 3 HOH C 24 324 125 HOH HOH . I 3 HOH C 25 325 92 HOH HOH . I 3 HOH C 26 326 98 HOH HOH . I 3 HOH C 27 327 130 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 2 -1.445 6.861 23.081 1 45.47 ? C1 EDO 201 C 1 HETATM 2 O O1 EDO . . . F 2 -1.38 7.439 24.391 1 37.66 ? O1 EDO 201 C 1 HETATM 3 C C2 EDO . . . F 2 -0.138 6.129 22.869 1 44.62 ? C2 EDO 201 C 1 HETATM 4 O O2 EDO . . . F 2 -0.196 4.909 23.6 1 45.31 ? O2 EDO 201 C 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #