data_5HES # _model_server_result.job_id 1y4RgLpqXJzjc37mKy5tFQ _model_server_result.datetime_utc '2025-03-04 15:21:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hes # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5HES # _exptl.entry_id 5HES _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 489.922 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(3-{[5-(4-chlorophenyl)-1H-pyrrolo[2,3-b]pyridin-3-yl]carbonyl}-2,4-difluorophenyl)propane-1-sulfonamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HES _cell.length_a 78.712 _cell.length_b 78.712 _cell.length_c 133.345 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HES _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 158 A HIS 160 1_555 A N TPO 159 A TPO 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A O3P TPO 159 A TPO 161 1_555 A SG CYS 283 A CYS 285 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.689 ? # _chem_comp.formula 'C23 H18 Cl F2 N3 O3 S' _chem_comp.formula_weight 489.922 _chem_comp.id 032 _chem_comp.mon_nstd_flag . _chem_comp.name N-(3-{[5-(4-chlorophenyl)-1H-pyrrolo[2,3-b]pyridin-3-yl]carbonyl}-2,4-difluorophenyl)propane-1-sulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Vemurafenib;PLX4032 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C09 032 doub 1 n y C10 C11 032 sing 2 n y C10 CL13 032 sing 3 n n C15 N14 032 sing 4 n y C15 C16 032 doub 5 n y C15 H15 032 sing 6 n n C17 C16 032 sing 7 n n C17 C18 032 sing 8 n n C17 O19 032 doub 9 n n C20 C21 032 doub 10 n y C20 C18 032 sing 11 n y C20 F26 032 sing 12 n n C21 C22 032 sing 13 n y C21 N27 032 sing 14 n n C22 C23 032 doub 15 n y C22 H22 032 sing 16 n n C24 C18 032 doub 17 n y C24 C23 032 sing 18 n y C24 F25 032 sing 19 n n C01 C02 032 doub 20 n y C01 C04 032 sing 21 n y C01 C07 032 sing 22 n y C02 N03 032 sing 23 n y C02 H02 032 sing 24 n n N03 C06 032 doub 25 n y C04 C05 032 doub 26 n y C04 H04 032 sing 27 n n N14 C06 032 sing 28 n y N14 H18 032 sing 29 n n C16 C05 032 sing 30 n y C05 C06 032 sing 31 n y C07 C08 032 doub 32 n y C07 C12 032 sing 33 n y C23 H23 032 sing 34 n n N27 S28 032 sing 35 n n N27 HN27 032 sing 36 n n S28 O29 032 doub 37 n n S28 O30 032 doub 38 n n S28 C31 032 sing 39 n n C31 C32 032 sing 40 n n C31 H31 032 sing 41 n n C31 H31A 032 sing 42 n n C32 C33 032 sing 43 n n C32 H32 032 sing 44 n n C32 H32A 032 sing 45 n n C33 H33 032 sing 46 n n C33 H33A 032 sing 47 n n C33 H33B 032 sing 48 n n C08 C09 032 sing 49 n y C08 H08 032 sing 50 n n C09 H09 032 sing 51 n n C11 C12 032 doub 52 n y C11 H11 032 sing 53 n n C12 H12 032 sing 54 n n # _atom_sites.entry_id 5HES _atom_sites.fract_transf_matrix[1][1] 0.012705 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012705 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007499 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 032 A 1 401 1 032 VEM . D 3 EDO A 1 402 1 EDO EDO . E 2 032 B 1 401 2 032 VEM . F 3 EDO B 1 402 2 EDO EDO . G 4 HOH A 1 501 134 HOH HOH . G 4 HOH A 2 502 60 HOH HOH . G 4 HOH A 3 503 96 HOH HOH . G 4 HOH A 4 504 69 HOH HOH . G 4 HOH A 5 505 48 HOH HOH . G 4 HOH A 6 506 114 HOH HOH . G 4 HOH A 7 507 165 HOH HOH . G 4 HOH A 8 508 170 HOH HOH . G 4 HOH A 9 509 39 HOH HOH . G 4 HOH A 10 510 22 HOH HOH . G 4 HOH A 11 511 24 HOH HOH . G 4 HOH A 12 512 150 HOH HOH . G 4 HOH A 13 513 130 HOH HOH . G 4 HOH A 14 514 41 HOH HOH . G 4 HOH A 15 515 71 HOH HOH . G 4 HOH A 16 516 176 HOH HOH . G 4 HOH A 17 517 18 HOH HOH . G 4 HOH A 18 518 9 HOH HOH . G 4 HOH A 19 519 49 HOH HOH . G 4 HOH A 20 520 175 HOH HOH . G 4 HOH A 21 521 91 HOH HOH . G 4 HOH A 22 522 108 HOH HOH . G 4 HOH A 23 523 112 HOH HOH . G 4 HOH A 24 524 55 HOH HOH . G 4 HOH A 25 525 123 HOH HOH . G 4 HOH A 26 526 109 HOH HOH . G 4 HOH A 27 527 80 HOH HOH . G 4 HOH A 28 528 35 HOH HOH . G 4 HOH A 29 529 1 HOH HOH . G 4 HOH A 30 530 126 HOH HOH . G 4 HOH A 31 531 63 HOH HOH . G 4 HOH A 32 532 37 HOH HOH . G 4 HOH A 33 533 75 HOH HOH . G 4 HOH A 34 534 11 HOH HOH . G 4 HOH A 35 535 78 HOH HOH . G 4 HOH A 36 536 17 HOH HOH . G 4 HOH A 37 537 36 HOH HOH . G 4 HOH A 38 538 40 HOH HOH . G 4 HOH A 39 539 13 HOH HOH . G 4 HOH A 40 540 117 HOH HOH . G 4 HOH A 41 541 5 HOH HOH . G 4 HOH A 42 542 44 HOH HOH . G 4 HOH A 43 543 131 HOH HOH . G 4 HOH A 44 544 145 HOH HOH . G 4 HOH A 45 545 121 HOH HOH . G 4 HOH A 46 546 119 HOH HOH . G 4 HOH A 47 547 116 HOH HOH . G 4 HOH A 48 548 28 HOH HOH . G 4 HOH A 49 549 84 HOH HOH . G 4 HOH A 50 550 77 HOH HOH . G 4 HOH A 51 551 52 HOH HOH . G 4 HOH A 52 552 132 HOH HOH . G 4 HOH A 53 553 153 HOH HOH . G 4 HOH A 54 554 156 HOH HOH . G 4 HOH A 55 555 97 HOH HOH . G 4 HOH A 56 556 27 HOH HOH . G 4 HOH A 57 557 7 HOH HOH . G 4 HOH A 58 558 29 HOH HOH . G 4 HOH A 59 559 87 HOH HOH . G 4 HOH A 60 560 20 HOH HOH . G 4 HOH A 61 561 140 HOH HOH . G 4 HOH A 62 562 76 HOH HOH . G 4 HOH A 63 563 146 HOH HOH . G 4 HOH A 64 564 43 HOH HOH . G 4 HOH A 65 565 58 HOH HOH . G 4 HOH A 66 566 19 HOH HOH . G 4 HOH A 67 567 122 HOH HOH . G 4 HOH A 68 568 54 HOH HOH . G 4 HOH A 69 569 107 HOH HOH . G 4 HOH A 70 570 95 HOH HOH . G 4 HOH A 71 571 113 HOH HOH . G 4 HOH A 72 572 82 HOH HOH . G 4 HOH A 73 573 120 HOH HOH . G 4 HOH A 74 574 124 HOH HOH . G 4 HOH A 75 575 89 HOH HOH . G 4 HOH A 76 576 118 HOH HOH . G 4 HOH A 77 577 38 HOH HOH . G 4 HOH A 78 578 47 HOH HOH . G 4 HOH A 79 579 88 HOH HOH . G 4 HOH A 80 580 111 HOH HOH . G 4 HOH A 81 581 102 HOH HOH . G 4 HOH A 82 582 139 HOH HOH . G 4 HOH A 83 583 74 HOH HOH . G 4 HOH A 84 584 138 HOH HOH . G 4 HOH A 85 585 64 HOH HOH . G 4 HOH A 86 586 155 HOH HOH . G 4 HOH A 87 587 143 HOH HOH . G 4 HOH A 88 588 86 HOH HOH . G 4 HOH A 89 589 137 HOH HOH . G 4 HOH A 90 590 45 HOH HOH . G 4 HOH A 91 591 142 HOH HOH . G 4 HOH A 92 592 157 HOH HOH . G 4 HOH A 93 593 154 HOH HOH . H 4 HOH B 1 501 83 HOH HOH . H 4 HOH B 2 502 59 HOH HOH . H 4 HOH B 3 503 173 HOH HOH . H 4 HOH B 4 504 50 HOH HOH . H 4 HOH B 5 505 67 HOH HOH . H 4 HOH B 6 506 70 HOH HOH . H 4 HOH B 7 507 31 HOH HOH . H 4 HOH B 8 508 104 HOH HOH . H 4 HOH B 9 509 90 HOH HOH . H 4 HOH B 10 510 81 HOH HOH . H 4 HOH B 11 511 129 HOH HOH . H 4 HOH B 12 512 79 HOH HOH . H 4 HOH B 13 513 25 HOH HOH . H 4 HOH B 14 514 163 HOH HOH . H 4 HOH B 15 515 106 HOH HOH . H 4 HOH B 16 516 149 HOH HOH . H 4 HOH B 17 517 21 HOH HOH . H 4 HOH B 18 518 14 HOH HOH . H 4 HOH B 19 519 166 HOH HOH . H 4 HOH B 20 520 103 HOH HOH . H 4 HOH B 21 521 162 HOH HOH . H 4 HOH B 22 522 136 HOH HOH . H 4 HOH B 23 523 110 HOH HOH . H 4 HOH B 24 524 23 HOH HOH . H 4 HOH B 25 525 2 HOH HOH . H 4 HOH B 26 526 147 HOH HOH . H 4 HOH B 27 527 30 HOH HOH . H 4 HOH B 28 528 73 HOH HOH . H 4 HOH B 29 529 135 HOH HOH . H 4 HOH B 30 530 99 HOH HOH . H 4 HOH B 31 531 33 HOH HOH . H 4 HOH B 32 532 92 HOH HOH . H 4 HOH B 33 533 178 HOH HOH . H 4 HOH B 34 534 8 HOH HOH . H 4 HOH B 35 535 66 HOH HOH . H 4 HOH B 36 536 177 HOH HOH . H 4 HOH B 37 537 128 HOH HOH . H 4 HOH B 38 538 4 HOH HOH . H 4 HOH B 39 539 179 HOH HOH . H 4 HOH B 40 540 158 HOH HOH . H 4 HOH B 41 541 32 HOH HOH . H 4 HOH B 42 542 10 HOH HOH . H 4 HOH B 43 543 152 HOH HOH . H 4 HOH B 44 544 168 HOH HOH . H 4 HOH B 45 545 6 HOH HOH . H 4 HOH B 46 546 161 HOH HOH . H 4 HOH B 47 547 115 HOH HOH . H 4 HOH B 48 548 100 HOH HOH . H 4 HOH B 49 549 85 HOH HOH . H 4 HOH B 50 550 172 HOH HOH . H 4 HOH B 51 551 171 HOH HOH . H 4 HOH B 52 552 151 HOH HOH . H 4 HOH B 53 553 56 HOH HOH . H 4 HOH B 54 554 144 HOH HOH . H 4 HOH B 55 555 12 HOH HOH . H 4 HOH B 56 556 34 HOH HOH . H 4 HOH B 57 557 16 HOH HOH . H 4 HOH B 58 558 53 HOH HOH . H 4 HOH B 59 559 62 HOH HOH . H 4 HOH B 60 560 15 HOH HOH . H 4 HOH B 61 561 57 HOH HOH . H 4 HOH B 62 562 98 HOH HOH . H 4 HOH B 63 563 3 HOH HOH . H 4 HOH B 64 564 160 HOH HOH . H 4 HOH B 65 565 46 HOH HOH . H 4 HOH B 66 566 65 HOH HOH . H 4 HOH B 67 567 93 HOH HOH . H 4 HOH B 68 568 101 HOH HOH . H 4 HOH B 69 569 164 HOH HOH . H 4 HOH B 70 570 68 HOH HOH . H 4 HOH B 71 571 26 HOH HOH . H 4 HOH B 72 572 159 HOH HOH . H 4 HOH B 73 573 148 HOH HOH . H 4 HOH B 74 574 174 HOH HOH . H 4 HOH B 75 575 133 HOH HOH . H 4 HOH B 76 576 125 HOH HOH . H 4 HOH B 77 577 94 HOH HOH . H 4 HOH B 78 578 127 HOH HOH . H 4 HOH B 79 579 141 HOH HOH . H 4 HOH B 80 580 61 HOH HOH . H 4 HOH B 81 581 169 HOH HOH . H 4 HOH B 82 582 51 HOH HOH . H 4 HOH B 83 583 42 HOH HOH . H 4 HOH B 84 584 105 HOH HOH . H 4 HOH B 85 585 72 HOH HOH . H 4 HOH B 86 586 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 032 . . . C 2 28.569 71.527 -5.708 1 46.53 ? C10 032 401 A 1 HETATM 2 C C15 032 . . . C 2 26.886 72.205 2.777 1 39.22 ? C15 032 401 A 1 HETATM 3 C C17 032 . . . C 2 26.312 69.916 1.96 1 36.85 ? C17 032 401 A 1 HETATM 4 C C20 032 . . . C 2 26.188 68.728 4.168 1 34.31 ? C20 032 401 A 1 HETATM 5 C C21 032 . . . C 2 25.587 68.459 5.395 1 39.35 ? C21 032 401 A 1 HETATM 6 C C22 032 . . . C 2 24.323 68.948 5.684 1 33.82 ? C22 032 401 A 1 HETATM 7 C C24 032 . . . C 2 24.367 70.04 3.57 1 35.06 ? C24 032 401 A 1 HETATM 8 C C01 032 . . . C 2 27.973 72.517 -1.618 1 43.5 ? C01 032 401 A 1 HETATM 9 C C02 032 . . . C 2 28.202 73.803 -1.144 1 38.22 ? C02 032 401 A 1 HETATM 10 N N03 032 . . . C 2 27.976 74.203 0.099 1 39.1 ? N03 032 401 A 1 HETATM 11 C C04 032 . . . C 2 27.466 71.553 -0.738 1 37.37 ? C04 032 401 A 1 HETATM 12 N N14 032 . . . C 2 27.282 73.399 2.255 1 38.17 ? N14 032 401 A 1 HETATM 13 C C16 032 . . . C 2 26.822 71.261 1.791 1 34.98 ? C16 032 401 A 1 HETATM 14 C C05 032 . . . C 2 27.247 71.928 0.581 1 45.13 ? C05 032 401 A 1 HETATM 15 C C06 032 . . . C 2 27.523 73.256 0.923 1 41.07 ? C06 032 401 A 1 HETATM 16 C C07 032 . . . C 2 28.235 72.189 -3.031 1 38.41 ? C07 032 401 A 1 HETATM 17 C C18 032 . . . C 2 25.606 69.539 3.237 1 32.12 ? C18 032 401 A 1 HETATM 18 C C23 032 . . . C 2 23.712 69.762 4.758 1 39.55 ? C23 032 401 A 1 HETATM 19 F F25 032 . . . C 2 23.797 70.903 2.712 1 33.34 ? F25 032 401 A 1 HETATM 20 F F26 032 . . . C 2 27.362 68.142 3.894 1 33.92 ? F26 032 401 A 1 HETATM 21 N N27 032 . . . C 2 26.358 67.726 6.329 1 38.46 ? N27 032 401 A 1 HETATM 22 S S28 032 . . . C 2 26.045 67.355 7.861 1 39.69 ? S28 032 401 A 1 HETATM 23 O O29 032 . . . C 2 27.154 66.622 8.317 1 34.61 ? O29 032 401 A 1 HETATM 24 O O30 032 . . . C 2 24.751 66.769 7.924 1 40.32 ? O30 032 401 A 1 HETATM 25 C C31 032 . . . C 2 25.948 68.948 8.625 1 35.46 ? C31 032 401 A 1 HETATM 26 C C32 032 . . . C 2 27.148 69.674 8.85 1 39.63 ? C32 032 401 A 1 HETATM 27 C C33 032 . . . C 2 26.854 71.022 9.528 1 37.73 ? C33 032 401 A 1 HETATM 28 C C08 032 . . . C 2 28.726 70.936 -3.404 1 41.01 ? C08 032 401 A 1 HETATM 29 C C09 032 . . . C 2 28.914 70.61 -4.735 1 41.52 ? C09 032 401 A 1 HETATM 30 C C11 032 . . . C 2 28.089 72.772 -5.379 1 39.42 ? C11 032 401 A 1 HETATM 31 C C12 032 . . . C 2 27.935 73.103 -4.045 1 46.19 ? C12 032 401 A 1 HETATM 32 CL CL13 032 . . . C 2 28.698 71.075 -7.406 1 45.83 ? CL13 032 401 A 1 HETATM 33 O O19 032 . . . C 2 26.396 69.04 1.155 1 33.79 ? O19 032 401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 33 #