data_5HEX # _model_server_result.job_id PKxoTQ7oQaGpWW4-Q1bKEA _model_server_result.datetime_utc '2024-11-30 09:09:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hex # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1002}' # _entry.id 5HEX # _exptl.entry_id 5HEX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 549.346 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[(3-bromobenzene-1-carbonyl)amino]-6-{[(4-carboxy-5-methylfuran-2-yl)sulfonyl]amino}-2,6-dideoxy-alpha-D-glucopyranos e' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.34 _cell.angle_gamma 90 _cell.entry_id 5HEX _cell.length_a 66.032 _cell.length_b 154.893 _cell.length_c 114.825 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HEX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C19 H21 Br N2 O10 S' _chem_comp.formula_weight 549.346 _chem_comp.id 604 _chem_comp.mon_nstd_flag . _chem_comp.name '2-[(3-bromobenzene-1-carbonyl)amino]-6-{[(4-carboxy-5-methylfuran-2-yl)sulfonyl]amino}-2,6-dideoxy-alpha-D-glucopyranos e' _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms '5-[[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-[(3-bromophenyl)carbonylamino]-3,4,6-tris(oxidanyl)oxan-2-yl]methylsulfamoyl]-2-m ethyl-furan-3-carboxylic acid;2-[(3-bromobenzene-1-carbonyl)amino]-6-{[(4-carboxy-5-methylfuran-2-yl)sulfonyl]amino}-2,6-dideoxy-alpha-D-glucose;2-[(3-bromobenzene-1-carbonyl)amino]-6-{[(4-carboxy-5-methylfuran-2-yl)sulfonyl]amino}-2,6-dideoxy-D-glucose;2-[(3-bromobenzene-1-carbonyl)amino]-6-{[(4-carboxy-5-methylfuran-2-yl)sulfonyl]amino}-2,6-dideoxy-glucose' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR C8 604 sing 1 n n C3A C8 604 doub 2 n y C3A C1A 604 sing 3 n y C8 C4A 604 sing 4 n y C1A C2A 604 doub 5 n y C4A C6A 604 doub 6 n y O3 C3 604 sing 7 n n C2A C6A 604 sing 8 n y C6A C11 604 sing 9 n n C11 N2 604 sing 10 n n C11 O23 604 doub 11 n n N2 C2 604 sing 12 n n C3 C2 604 sing 13 n n C3 C4 604 sing 14 n n O4 C4 604 sing 15 n n C2 C1 604 sing 16 n n C4 C5 604 sing 17 n n C1 O1 604 sing 18 n n C1 O5 604 sing 19 n n C5 O5 604 sing 20 n n C5 C6 604 sing 21 n n N21 C6 604 sing 22 n n N21 S32 604 sing 23 n n O26 S32 604 doub 24 n n S32 O25 604 doub 25 n n S32 C10 604 sing 26 n n O27 C10 604 sing 27 n y O27 C9 604 sing 28 n y C10 C5A 604 doub 29 n y C18 C9 604 sing 30 n n C9 C7 604 doub 31 n y C5A C7 604 sing 32 n y C7 C12 604 sing 33 n n C12 O22 604 doub 34 n n C12 O24 604 sing 35 n n C1A H1A 604 sing 36 n n C2A H2A 604 sing 37 n n C3A H3A 604 sing 38 n n C4A H4A 604 sing 39 n n C5A H5A 604 sing 40 n n C2 H2 604 sing 41 n n C3 H3 604 sing 42 n n C4 H4 604 sing 43 n n C5 H5 604 sing 44 n n C1 H1 604 sing 45 n n C18 H11 604 sing 46 n n C18 H12 604 sing 47 n n C18 H13 604 sing 48 n n C6 H61 604 sing 49 n n C6 H62 604 sing 50 n n N2 HN21 604 sing 51 n n N21 H17 604 sing 52 n n O24 H18 604 sing 53 n n O3 HO3 604 sing 54 n n O4 HO4 604 sing 55 n n O1 HO1 604 sing 56 n n # _atom_sites.entry_id 5HEX _atom_sites.fract_transf_matrix[1][1] 0.015144 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001682 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006456 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008762 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 604 A 1 1001 1 604 UNL . D 2 604 A 1 1002 1 604 UNL . E 2 604 B 1 1001 1 604 UNL . F 2 604 B 1 1002 1 604 UNL . G 3 HOH A 1 1101 86 HOH HOH . G 3 HOH A 2 1102 59 HOH HOH . G 3 HOH A 3 1103 80 HOH HOH . G 3 HOH A 4 1104 90 HOH HOH . G 3 HOH A 5 1105 46 HOH HOH . G 3 HOH A 6 1106 3 HOH HOH . G 3 HOH A 7 1107 87 HOH HOH . G 3 HOH A 8 1108 85 HOH HOH . G 3 HOH A 9 1109 18 HOH HOH . G 3 HOH A 10 1110 12 HOH HOH . G 3 HOH A 11 1111 9 HOH HOH . G 3 HOH A 12 1112 24 HOH HOH . G 3 HOH A 13 1113 42 HOH HOH . G 3 HOH A 14 1114 41 HOH HOH . G 3 HOH A 15 1115 13 HOH HOH . G 3 HOH A 16 1116 22 HOH HOH . G 3 HOH A 17 1117 72 HOH HOH . G 3 HOH A 18 1118 88 HOH HOH . G 3 HOH A 19 1119 81 HOH HOH . G 3 HOH A 20 1120 28 HOH HOH . G 3 HOH A 21 1121 39 HOH HOH . G 3 HOH A 22 1122 73 HOH HOH . G 3 HOH A 23 1123 67 HOH HOH . G 3 HOH A 24 1124 61 HOH HOH . G 3 HOH A 25 1125 37 HOH HOH . G 3 HOH A 26 1126 84 HOH HOH . G 3 HOH A 27 1127 64 HOH HOH . G 3 HOH A 28 1128 83 HOH HOH . G 3 HOH A 29 1129 8 HOH HOH . G 3 HOH A 30 1130 56 HOH HOH . G 3 HOH A 31 1131 38 HOH HOH . H 3 HOH B 1 1101 60 HOH HOH . H 3 HOH B 2 1102 57 HOH HOH . H 3 HOH B 3 1103 49 HOH HOH . H 3 HOH B 4 1104 4 HOH HOH . H 3 HOH B 5 1105 33 HOH HOH . H 3 HOH B 6 1106 32 HOH HOH . H 3 HOH B 7 1107 43 HOH HOH . H 3 HOH B 8 1108 82 HOH HOH . H 3 HOH B 9 1109 25 HOH HOH . H 3 HOH B 10 1110 2 HOH HOH . H 3 HOH B 11 1111 74 HOH HOH . H 3 HOH B 12 1112 1 HOH HOH . H 3 HOH B 13 1113 16 HOH HOH . H 3 HOH B 14 1114 11 HOH HOH . H 3 HOH B 15 1115 44 HOH HOH . H 3 HOH B 16 1116 15 HOH HOH . H 3 HOH B 17 1117 20 HOH HOH . H 3 HOH B 18 1118 47 HOH HOH . H 3 HOH B 19 1119 79 HOH HOH . H 3 HOH B 20 1120 89 HOH HOH . H 3 HOH B 21 1121 21 HOH HOH . H 3 HOH B 22 1122 53 HOH HOH . H 3 HOH B 23 1123 55 HOH HOH . H 3 HOH B 24 1124 75 HOH HOH . H 3 HOH B 25 1125 54 HOH HOH . H 3 HOH B 26 1126 14 HOH HOH . H 3 HOH B 27 1127 70 HOH HOH . H 3 HOH B 28 1128 78 HOH HOH . H 3 HOH B 29 1129 27 HOH HOH . H 3 HOH B 30 1130 35 HOH HOH . H 3 HOH B 31 1131 40 HOH HOH . H 3 HOH B 32 1132 10 HOH HOH . H 3 HOH B 33 1133 45 HOH HOH . H 3 HOH B 34 1134 23 HOH HOH . H 3 HOH B 35 1135 52 HOH HOH . H 3 HOH B 36 1136 19 HOH HOH . H 3 HOH B 37 1137 5 HOH HOH . H 3 HOH B 38 1138 31 HOH HOH . H 3 HOH B 39 1139 48 HOH HOH . H 3 HOH B 40 1140 76 HOH HOH . H 3 HOH B 41 1141 50 HOH HOH . H 3 HOH B 42 1142 6 HOH HOH . H 3 HOH B 43 1143 68 HOH HOH . H 3 HOH B 44 1144 17 HOH HOH . H 3 HOH B 45 1145 71 HOH HOH . H 3 HOH B 46 1146 51 HOH HOH . H 3 HOH B 47 1147 65 HOH HOH . H 3 HOH B 48 1148 69 HOH HOH . H 3 HOH B 49 1149 36 HOH HOH . H 3 HOH B 50 1150 77 HOH HOH . H 3 HOH B 51 1151 58 HOH HOH . H 3 HOH B 52 1152 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1A 604 . . . D 2 89.02 22.448 -104.568 1 65.77 ? C1A 604 1002 A 1 HETATM 2 C C2A 604 . . . D 2 88.554 21.25 -104.063 1 70.2 ? C2A 604 1002 A 1 HETATM 3 C C3A 604 . . . D 2 88.65 23.622 -103.948 1 75.06 ? C3A 604 1002 A 1 HETATM 4 C C4A 604 . . . D 2 87.364 22.407 -102.332 1 61.51 ? C4A 604 1002 A 1 HETATM 5 C C5A 604 . . . D 2 83.907 10.872 -99.511 1 42.33 ? C5A 604 1002 A 1 HETATM 6 C C6A 604 . . . D 2 87.731 21.242 -102.953 1 64.64 ? C6A 604 1002 A 1 HETATM 7 C C7 604 . . . D 2 83.543 9.536 -99.791 1 42.82 ? C7 604 1002 A 1 HETATM 8 C C8 604 . . . D 2 87.828 23.595 -102.837 1 72.5 ? C8 604 1002 A 1 HETATM 9 C C9 604 . . . D 2 84.185 9.168 -100.949 1 41.17 ? C9 604 1002 A 1 HETATM 10 C C10 604 . . . D 2 84.759 11.257 -100.522 1 40.27 ? C10 604 1002 A 1 HETATM 11 C C11 604 . . . D 2 87.216 19.995 -102.372 1 55.65 ? C11 604 1002 A 1 HETATM 12 C C12 604 . . . D 2 82.586 8.687 -98.939 1 43.73 ? C12 604 1002 A 1 HETATM 13 C C2 604 . . . D 2 86.394 17.772 -102.931 1 46.89 ? C2 604 1002 A 1 HETATM 14 C C3 604 . . . D 2 86.176 16.99 -104.201 1 47.65 ? C3 604 1002 A 1 HETATM 15 C C4 604 . . . D 2 85.859 15.55 -103.886 1 45.42 ? C4 604 1002 A 1 HETATM 16 C C5 604 . . . D 2 84.707 15.567 -102.912 1 44.68 ? C5 604 1002 A 1 HETATM 17 C C1 604 . . . D 2 85.223 17.563 -101.992 1 48.43 ? C1 604 1002 A 1 HETATM 18 C C18 604 . . . D 2 84.21 7.932 -101.743 1 36.57 ? C18 604 1002 A 1 HETATM 19 C C6 604 . . . D 2 84.103 14.215 -102.608 1 39.31 ? C6 604 1002 A 1 HETATM 20 N N2 604 . . . D 2 86.6 19.155 -103.258 1 50.3 ? N2 604 1002 A 1 HETATM 21 N N21 604 . . . D 2 85.161 13.23 -102.391 1 41.69 ? N21 604 1002 A 1 HETATM 22 O O22 604 . . . D 2 82.352 7.524 -99.397 1 45.28 ? O22 604 1002 A 1 HETATM 23 O O23 604 . . . D 2 87.366 19.793 -101.177 1 53.68 ? O23 604 1002 A 1 HETATM 24 O O24 604 . . . D 2 82.126 9.247 -97.897 1 39.92 ? O24 604 1002 A 1 HETATM 25 O O25 604 . . . D 2 85.012 13.699 -99.81 1 44.26 ? O25 604 1002 A 1 HETATM 26 O O26 604 . . . D 2 86.958 12.386 -100.775 1 44.23 ? O26 604 1002 A 1 HETATM 27 O O27 604 . . . D 2 84.932 10.218 -101.392 1 42.04 ? O27 604 1002 A 1 HETATM 28 O O5 604 . . . D 2 85.16 16.174 -101.713 1 47.42 ? O5 604 1002 A 1 HETATM 29 O O3 604 . . . D 2 87.382 17.037 -104.925 1 49.77 ? O3 604 1002 A 1 HETATM 30 O O4 604 . . . D 2 85.447 14.938 -105.097 1 48.31 ? O4 604 1002 A 1 HETATM 31 O O1 604 . . . D 2 84.016 17.972 -102.619 1 44.15 ? O1 604 1002 A 1 HETATM 32 S S32 604 . . . D 2 85.566 12.778 -100.789 1 39.55 ? S32 604 1002 A 1 HETATM 33 BR BR 604 . . . D 2 87.289 25.181 -101.944 1 147.02 ? BR 604 1002 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 33 #