data_5HF2
#
_model_server_result.job_id            c0XOWSyQSJCMibC96VXzvA 
_model_server_result.datetime_utc      '2024-11-06 16:21:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5hf2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    5HF2 
#
_exptl.entry_id    5HF2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'Tricyclic NADPH' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5HF2 
_cell.length_a            79.022 
_cell.length_b            79.022 
_cell.length_c            108.247 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5HF2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                XNP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'Tricyclic NADPH' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3' C3' XNP sing 430 n n 
C3' C2' XNP sing 431 n n 
C3' C4' XNP sing 432 n n 
C2' O2' XNP sing 433 n n 
C2' C1' XNP sing 434 n n 
O2' CAA XNP sing 435 n n 
CAA CAB XNP sing 436 n n 
CAA NAF XNP sing 437 n n 
CAB CAC XNP sing 438 n n 
CAC CAD XNP sing 439 n n 
CAD CBT XNP sing 440 n n 
CAD CAE XNP doub 441 n n 
CBT OBV XNP doub 442 n n 
CBT NBU XNP sing 443 n n 
CAE NAF XNP sing 444 n n 
NAF C1' XNP sing 445 n n 
C1' O4' XNP sing 446 n n 
O4' C4' XNP sing 447 n n 
C4' C5' XNP sing 448 n n 
C5' O5' XNP sing 449 n n 
O5' PAN XNP sing 450 n n 
PAN OBP XNP doub 451 n n 
PAN OBO XNP sing 452 n n 
PAN OAO XNP sing 453 n n 
OAO PAP XNP sing 454 n n 
PAP OBQ XNP doub 455 n n 
PAP OBR XNP sing 456 n n 
PAP OAQ XNP sing 457 n n 
OAQ CAR XNP sing 458 n n 
CAR CAS XNP sing 459 n n 
CAS OAW XNP sing 460 n n 
CAS CAT XNP sing 461 n n 
OAW CAV XNP sing 462 n n 
CAT OAZ XNP sing 463 n n 
CAT CAU XNP sing 464 n n 
CAU OAY XNP sing 465 n n 
CAU CAV XNP sing 466 n n 
OAY PBA XNP sing 467 n n 
PBA OBB XNP doub 468 n n 
PBA OBC XNP sing 469 n n 
PBA OBD XNP sing 470 n n 
CAV NAX XNP sing 471 n n 
NAX CBE XNP sing 472 n y 
NAX CBH XNP sing 473 n y 
CBE NBF XNP doub 474 n y 
NBF CBG XNP sing 475 n y 
CBG CBH XNP doub 476 n y 
CBG CBI XNP sing 477 n y 
CBH NBL XNP sing 478 n y 
NBL CBK XNP doub 479 n y 
CBK NBJ XNP sing 480 n y 
NBJ CBI XNP doub 481 n y 
CBI NBM XNP sing 482 n n 
O3' H1 XNP sing 483 n n 
C3' H2 XNP sing 484 n n 
C2' H3 XNP sing 485 n n 
CAA H4 XNP sing 486 n n 
CAB H5 XNP sing 487 n n 
CAB H6 XNP sing 488 n n 
CAC H7 XNP sing 489 n n 
CAC H8 XNP sing 490 n n 
NBU H9 XNP sing 491 n n 
NBU H10 XNP sing 492 n n 
CAE H11 XNP sing 493 n n 
C1' H12 XNP sing 494 n n 
C4' H13 XNP sing 495 n n 
C5' H14 XNP sing 496 n n 
C5' H15 XNP sing 497 n n 
OBO H16 XNP sing 498 n n 
OBR H17 XNP sing 499 n n 
CAR H18 XNP sing 500 n n 
CAR H19 XNP sing 501 n n 
CAS H20 XNP sing 502 n n 
CAT H21 XNP sing 503 n n 
OAZ H22 XNP sing 504 n n 
CAU H23 XNP sing 505 n n 
OBC H24 XNP sing 506 n n 
OBD H25 XNP sing 507 n n 
CAV H26 XNP sing 508 n n 
CBE H27 XNP sing 509 n n 
CBK H30 XNP sing 510 n n 
NBM H31 XNP sing 511 n n 
NBM H32 XNP sing 512 n n 
#
_atom_sites.entry_id                     5HF2 
_atom_sites.fract_transf_matrix[1][1]    0.012655 
_atom_sites.fract_transf_matrix[1][2]    0.007306 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014612 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009238 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 XNP X 1 201 1 XNP ANH . 
C 3 U75 X 1 202 1 U75 DRG . 
D 4 GOL X 1 203 221 GOL GOL . 
E 5 HOH X 1 301 72 HOH HOH . 
E 5 HOH X 2 302 78 HOH HOH . 
E 5 HOH X 3 303 49 HOH HOH . 
E 5 HOH X 4 304 8 HOH HOH . 
E 5 HOH X 5 305 51 HOH HOH . 
E 5 HOH X 6 306 43 HOH HOH . 
E 5 HOH X 7 307 66 HOH HOH . 
E 5 HOH X 8 308 62 HOH HOH . 
E 5 HOH X 9 309 98 HOH HOH . 
E 5 HOH X 10 310 18 HOH HOH . 
E 5 HOH X 11 311 71 HOH HOH . 
E 5 HOH X 12 312 79 HOH HOH . 
E 5 HOH X 13 313 96 HOH HOH . 
E 5 HOH X 14 314 42 HOH HOH . 
E 5 HOH X 15 315 99 HOH HOH . 
E 5 HOH X 16 316 24 HOH HOH . 
E 5 HOH X 17 317 85 HOH HOH . 
E 5 HOH X 18 318 88 HOH HOH . 
E 5 HOH X 19 319 4 HOH HOH . 
E 5 HOH X 20 320 28 HOH HOH . 
E 5 HOH X 21 321 41 HOH HOH . 
E 5 HOH X 22 322 32 HOH HOH . 
E 5 HOH X 23 323 111 HOH HOH . 
E 5 HOH X 24 324 34 HOH HOH . 
E 5 HOH X 25 325 106 HOH HOH . 
E 5 HOH X 26 326 105 HOH HOH . 
E 5 HOH X 27 327 113 HOH HOH . 
E 5 HOH X 28 328 48 HOH HOH . 
E 5 HOH X 29 329 17 HOH HOH . 
E 5 HOH X 30 330 60 HOH HOH . 
E 5 HOH X 31 331 7 HOH HOH . 
E 5 HOH X 32 332 44 HOH HOH . 
E 5 HOH X 33 333 80 HOH HOH . 
E 5 HOH X 34 334 83 HOH HOH . 
E 5 HOH X 35 335 6 HOH HOH . 
E 5 HOH X 36 336 29 HOH HOH . 
E 5 HOH X 37 337 46 HOH HOH . 
E 5 HOH X 38 338 12 HOH HOH . 
E 5 HOH X 39 339 116 HOH HOH . 
E 5 HOH X 40 340 27 HOH HOH . 
E 5 HOH X 41 341 55 HOH HOH . 
E 5 HOH X 42 342 15 HOH HOH . 
E 5 HOH X 43 343 58 HOH HOH . 
E 5 HOH X 44 344 47 HOH HOH . 
E 5 HOH X 45 345 37 HOH HOH . 
E 5 HOH X 46 346 40 HOH HOH . 
E 5 HOH X 47 347 59 HOH HOH . 
E 5 HOH X 48 348 50 HOH HOH . 
E 5 HOH X 49 349 109 HOH HOH . 
E 5 HOH X 50 350 19 HOH HOH . 
E 5 HOH X 51 351 90 HOH HOH . 
E 5 HOH X 52 352 119 HOH HOH . 
E 5 HOH X 53 353 115 HOH HOH . 
E 5 HOH X 54 354 82 HOH HOH . 
E 5 HOH X 55 355 84 HOH HOH . 
E 5 HOH X 56 356 70 HOH HOH . 
E 5 HOH X 57 357 100 HOH HOH . 
E 5 HOH X 58 358 77 HOH HOH . 
E 5 HOH X 59 359 11 HOH HOH . 
E 5 HOH X 60 360 16 HOH HOH . 
E 5 HOH X 61 361 81 HOH HOH . 
E 5 HOH X 62 362 10 HOH HOH . 
E 5 HOH X 63 363 125 HOH HOH . 
E 5 HOH X 64 364 65 HOH HOH . 
E 5 HOH X 65 365 35 HOH HOH . 
E 5 HOH X 66 366 107 HOH HOH . 
E 5 HOH X 67 367 3 HOH HOH . 
E 5 HOH X 68 368 13 HOH HOH . 
E 5 HOH X 69 369 64 HOH HOH . 
E 5 HOH X 70 370 20 HOH HOH . 
E 5 HOH X 71 371 33 HOH HOH . 
E 5 HOH X 72 372 39 HOH HOH . 
E 5 HOH X 73 373 103 HOH HOH . 
E 5 HOH X 74 374 5 HOH HOH . 
E 5 HOH X 75 375 36 HOH HOH . 
E 5 HOH X 76 376 38 HOH HOH . 
E 5 HOH X 77 377 117 HOH HOH . 
E 5 HOH X 78 378 1 HOH HOH . 
E 5 HOH X 79 379 2 HOH HOH . 
E 5 HOH X 80 380 25 HOH HOH . 
E 5 HOH X 81 381 126 HOH HOH . 
E 5 HOH X 82 382 23 HOH HOH . 
E 5 HOH X 83 383 67 HOH HOH . 
E 5 HOH X 84 384 104 HOH HOH . 
E 5 HOH X 85 385 22 HOH HOH . 
E 5 HOH X 86 386 76 HOH HOH . 
E 5 HOH X 87 387 86 HOH HOH . 
E 5 HOH X 88 388 9 HOH HOH . 
E 5 HOH X 89 389 68 HOH HOH . 
E 5 HOH X 90 390 63 HOH HOH . 
E 5 HOH X 91 391 56 HOH HOH . 
E 5 HOH X 92 392 122 HOH HOH . 
E 5 HOH X 93 393 73 HOH HOH . 
E 5 HOH X 94 394 95 HOH HOH . 
E 5 HOH X 95 395 121 HOH HOH . 
E 5 HOH X 96 396 93 HOH HOH . 
E 5 HOH X 97 397 21 HOH HOH . 
E 5 HOH X 98 398 130 HOH HOH . 
E 5 HOH X 99 399 54 HOH HOH . 
E 5 HOH X 100 400 110 HOH HOH . 
E 5 HOH X 101 401 14 HOH HOH . 
E 5 HOH X 102 402 120 HOH HOH . 
E 5 HOH X 103 403 74 HOH HOH . 
E 5 HOH X 104 404 87 HOH HOH . 
E 5 HOH X 105 405 61 HOH HOH . 
E 5 HOH X 106 406 89 HOH HOH . 
E 5 HOH X 107 407 75 HOH HOH . 
E 5 HOH X 108 408 26 HOH HOH . 
E 5 HOH X 109 409 97 HOH HOH . 
E 5 HOH X 110 410 91 HOH HOH . 
E 5 HOH X 111 411 101 HOH HOH . 
E 5 HOH X 112 412 132 HOH HOH . 
E 5 HOH X 113 413 31 HOH HOH . 
E 5 HOH X 114 414 45 HOH HOH . 
E 5 HOH X 115 415 30 HOH HOH . 
E 5 HOH X 116 416 52 HOH HOH . 
E 5 HOH X 117 417 123 HOH HOH . 
E 5 HOH X 118 418 128 HOH HOH . 
E 5 HOH X 119 419 69 HOH HOH . 
E 5 HOH X 120 420 102 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3' XNP . . . B 2 -5.627 32.07 13.09 1 23.7 ? O3' XNP 201 X 1 
HETATM 2 C C3' XNP . . . B 2 -5.475 32.001 11.646 1 27.66 ? C3' XNP 201 X 1 
HETATM 3 C C2' XNP . . . B 2 -4.15 32.536 11.127 1 28.81 ? C2' XNP 201 X 1 
HETATM 4 O O2' XNP . . . B 2 -3.015 32.619 12.026 1 26.94 ? O2' XNP 201 X 1 
HETATM 5 C CAA XNP . . . B 2 -2.033 31.7 11.353 1 25.79 ? CAA XNP 201 X 1 
HETATM 6 C CAB XNP . . . B 2 -0.57 32.028 11.449 1 27.11 ? CAB XNP 201 X 1 
HETATM 7 C CAC XNP . . . B 2 0.124 30.851 10.733 1 21.35 ? CAC XNP 201 X 1 
HETATM 8 C CAD XNP . . . B 2 -0.453 30.55 9.475 1 25.71 ? CAD XNP 201 X 1 
HETATM 9 C CBT XNP . . . B 2 0.219 29.793 8.508 1 21.66 ? CBT XNP 201 X 1 
HETATM 10 O OBV XNP . . . B 2 -0.289 29.59 7.394 1 26.55 ? OBV XNP 201 X 1 
HETATM 11 N NBU XNP . . . B 2 1.431 29.358 8.852 1 24.82 ? NBU XNP 201 X 1 
HETATM 12 C CAE XNP . . . B 2 -1.748 30.944 9.154 1 23.82 ? CAE XNP 201 X 1 
HETATM 13 N NAF XNP . . . B 2 -2.458 31.741 9.948 1 25.72 ? NAF XNP 201 X 1 
HETATM 14 C C1' XNP . . . B 2 -3.696 31.22 10.445 1 34.65 ? C1' XNP 201 X 1 
HETATM 15 O O4' XNP . . . B 2 -4.818 30.76 9.795 1 25.52 ? O4' XNP 201 X 1 
HETATM 16 C C4' XNP . . . B 2 -5.386 30.547 11.116 1 25.24 ? C4' XNP 201 X 1 
HETATM 17 C C5' XNP . . . B 2 -6.73 29.854 11.143 1 27.88 ? C5' XNP 201 X 1 
HETATM 18 O O5' XNP . . . B 2 -7.555 30.481 10.192 1 22.15 ? O5' XNP 201 X 1 
HETATM 19 P PAN XNP . . . B 2 -7.697 29.938 8.688 1 24.37 ? PAN XNP 201 X 1 
HETATM 20 O OBP XNP . . . B 2 -9.312 29.878 8.453 1 25.21 ? OBP XNP 201 X 1 
HETATM 21 O OBO XNP . . . B 2 -7.059 28.627 8.46 1 22.61 ? OBO XNP 201 X 1 
HETATM 22 O OAO XNP . . . B 2 -7.188 31.188 7.844 1 24.84 ? OAO XNP 201 X 1 
HETATM 23 P PAP XNP . . . B 2 -6.865 31.111 6.285 1 21.2 ? PAP XNP 201 X 1 
HETATM 24 O OBQ XNP . . . B 2 -5.848 32.199 5.803 1 22.92 ? OBQ XNP 201 X 1 
HETATM 25 O OBR XNP . . . B 2 -7.61 30.19 5.403 1 24.71 ? OBR XNP 201 X 1 
HETATM 26 O OAQ XNP . . . B 2 -7.999 32.303 6.077 1 19.13 ? OAQ XNP 201 X 1 
HETATM 27 C CAR XNP . . . B 2 -9.447 32.073 6.192 1 20.61 ? CAR XNP 201 X 1 
HETATM 28 C CAS XNP . . . B 2 -10.258 33.129 5.379 1 22.45 ? CAS XNP 201 X 1 
HETATM 29 O OAW XNP . . . B 2 -10.057 32.985 3.944 1 22.58 ? OAW XNP 201 X 1 
HETATM 30 C CAT XNP . . . B 2 -11.763 32.917 5.48 1 22.33 ? CAT XNP 201 X 1 
HETATM 31 O OAZ XNP . . . B 2 -12.285 33.405 6.726 1 20.92 ? OAZ XNP 201 X 1 
HETATM 32 C CAU XNP . . . B 2 -12.219 33.787 4.317 1 22.45 ? CAU XNP 201 X 1 
HETATM 33 O OAY XNP . . . B 2 -11.899 35.142 4.501 1 21.88 ? OAY XNP 201 X 1 
HETATM 34 P PBA XNP . . . B 2 -13.179 36.104 4.9 1 22.49 ? PBA XNP 201 X 1 
HETATM 35 O OBB XNP . . . B 2 -12.535 37.557 4.99 1 23.38 ? OBB XNP 201 X 1 
HETATM 36 O OBC XNP . . . B 2 -13.595 35.66 6.368 1 20.95 ? OBC XNP 201 X 1 
HETATM 37 O OBD XNP . . . B 2 -14.268 35.974 3.901 1 25.81 ? OBD XNP 201 X 1 
HETATM 38 C CAV XNP . . . B 2 -11.337 33.207 3.265 1 22.87 ? CAV XNP 201 X 1 
HETATM 39 N NAX XNP . . . B 2 -12.03 31.996 2.815 1 29.07 ? NAX XNP 201 X 1 
HETATM 40 C CBE XNP . . . B 2 -11.163 30.832 2.633 1 20.84 ? CBE XNP 201 X 1 
HETATM 41 N NBF XNP . . . B 2 -12.003 30.047 1.671 1 24.64 ? NBF XNP 201 X 1 
HETATM 42 C CBG XNP . . . B 2 -12.792 30.899 1 1 25.6 ? CBG XNP 201 X 1 
HETATM 43 C CBH XNP . . . B 2 -12.399 32.158 1.426 1 25.18 ? CBH XNP 201 X 1 
HETATM 44 N NBL XNP . . . B 2 -13.271 33.272 0.979 1 27.23 ? NBL XNP 201 X 1 
HETATM 45 C CBK XNP . . . B 2 -14.146 33.071 -0.087 1 25.94 ? CBK XNP 201 X 1 
HETATM 46 N NBJ XNP . . . B 2 -14.356 31.761 -0.551 1 28.72 ? NBJ XNP 201 X 1 
HETATM 47 C CBI XNP . . . B 2 -13.669 30.744 0.006 1 29.01 ? CBI XNP 201 X 1 
HETATM 48 N NBM XNP . . . B 2 -13.846 29.502 -0.413 1 28.12 ? NBM XNP 201 X 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           48 
#