data_5HG1 # _model_server_result.job_id s0qtB96-3ZIcAGajqHG9zw _model_server_result.datetime_utc '2024-11-05 00:24:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hg1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 5HG1 # _exptl.entry_id 5HG1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 378.205 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-deoxy-2-{[(2E)-3-(3,4-dichlorophenyl)prop-2-enoyl]amino}-alpha-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5HG1 _cell.length_a 165.12 _cell.length_b 165.12 _cell.length_c 126.478 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HG1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C15 H17 Cl2 N O6' _chem_comp.formula_weight 378.205 _chem_comp.id 62C _chem_comp.mon_nstd_flag . _chem_comp.name 2-deoxy-2-{[(2E)-3-(3,4-dichlorophenyl)prop-2-enoyl]amino}-alpha-D-glucopyranose _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C3 62C sing 1 n n CL2 C15 62C sing 2 n n C14 C13 62C doub 3 n y C14 C15 62C sing 4 n y C13 C12 62C sing 5 n y C15 C16 62C doub 6 n y O4 C4 62C sing 7 n n C3 C4 62C sing 8 n n C3 C2 62C sing 9 n n C4 C5 62C sing 10 n n N7 C2 62C sing 11 n n N7 C8 62C sing 12 n n C10 C8 62C sing 13 n n C10 C11 62C doub 14 e n C12 C11 62C sing 15 n n C12 C17 62C doub 16 n y C16 C17 62C sing 17 n y C16 CL1 62C sing 18 n n C2 C1 62C sing 19 n n C8 O9 62C doub 20 n n C5 C6 62C sing 21 n n C5 O5 62C sing 22 n n C1 O1 62C sing 23 n n C1 O5 62C sing 24 n n O6 C6 62C sing 25 n n C4 H41 62C sing 26 n n C5 H51 62C sing 27 n n C6 H61 62C sing 28 n n C6 H62 62C sing 29 n n C10 H101 62C sing 30 n n C13 H131 62C sing 31 n n C17 H171 62C sing 32 n n C14 H141 62C sing 33 n n C11 H111 62C sing 34 n n N7 H71 62C sing 35 n n C2 H21 62C sing 36 n n C1 H11 62C sing 37 n n O1 H12 62C sing 38 n n C3 H31 62C sing 39 n n O3 H32 62C sing 40 n n O4 H42 62C sing 41 n n O6 H63 62C sing 42 n n # _atom_sites.entry_id 5HG1 _atom_sites.fract_transf_matrix[1][1] 0.006056 _atom_sites.fract_transf_matrix[1][2] 0.003497 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006993 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007907 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 62C A 1 1001 1 62C LIG . C 2 62C A 1 1002 2 62C LIG . D 3 BG6 A 1 1003 1 BG6 G6P . E 4 FLC A 1 1004 1 FLC FLC . F 5 HOH A 1 1101 6 HOH HOH . F 5 HOH A 2 1102 1 HOH HOH . F 5 HOH A 3 1103 5 HOH HOH . F 5 HOH A 4 1104 2 HOH HOH . F 5 HOH A 5 1105 8 HOH HOH . F 5 HOH A 6 1106 3 HOH HOH . F 5 HOH A 7 1107 7 HOH HOH . F 5 HOH A 8 1108 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 62C . . . B 2 66.463 -49.397 -72.139 1 47.59 ? C4 62C 1001 A 1 HETATM 2 C C5 62C . . . B 2 65.948 -49.413 -70.698 1 47.26 ? C5 62C 1001 A 1 HETATM 3 C C6 62C . . . B 2 65.967 -50.783 -70.066 1 47.45 ? C6 62C 1001 A 1 HETATM 4 C C8 62C . . . B 2 68.066 -44.823 -71.515 1 48.62 ? C8 62C 1001 A 1 HETATM 5 C C10 62C . . . B 2 67.972 -43.467 -72.048 1 51.08 ? C10 62C 1001 A 1 HETATM 6 C C13 62C . . . B 2 67.873 -40.818 -73.217 1 64.45 ? C13 62C 1001 A 1 HETATM 7 C C15 62C . . . B 2 68.589 -38.543 -73.125 1 73.63 ? C15 62C 1001 A 1 HETATM 8 C C17 62C . . . B 2 69.111 -40.036 -71.316 1 55.62 ? C17 62C 1001 A 1 HETATM 9 CL CL1 62C . . . B 2 69.987 -37.522 -71.052 1 92.55 ? CL1 62C 1001 A 1 HETATM 10 C C16 62C . . . B 2 69.171 -38.781 -71.891 1 71.2 ? C16 62C 1001 A 1 HETATM 11 CL CL2 62C . . . B 2 68.655 -36.967 -73.844 1 101.83 ? CL2 62C 1001 A 1 HETATM 12 C C14 62C . . . B 2 67.941 -39.564 -73.794 1 65.78 ? C14 62C 1001 A 1 HETATM 13 C C12 62C . . . B 2 68.428 -41.065 -71.96 1 59.09 ? C12 62C 1001 A 1 HETATM 14 C C11 62C . . . B 2 68.417 -42.413 -71.39 1 58.49 ? C11 62C 1001 A 1 HETATM 15 O O9 62C . . . B 2 68.918 -45.168 -70.679 1 48.71 ? O9 62C 1001 A 1 HETATM 16 N N7 62C . . . B 2 67.241 -45.7 -72.082 1 48.79 ? N7 62C 1001 A 1 HETATM 17 C C2 62C . . . B 2 67.301 -47.086 -71.665 1 47.12 ? C2 62C 1001 A 1 HETATM 18 C C1 62C . . . B 2 66.746 -47.252 -70.256 1 42.04 ? C1 62C 1001 A 1 HETATM 19 O O1 62C . . . B 2 65.455 -46.743 -70.221 1 44.3 ? O1 62C 1001 A 1 HETATM 20 C C3 62C . . . B 2 66.543 -47.969 -72.65 1 47.3 ? C3 62C 1001 A 1 HETATM 21 O O3 62C . . . B 2 67.235 -47.937 -73.884 1 47.22 ? O3 62C 1001 A 1 HETATM 22 O O4 62C . . . B 2 65.613 -50.157 -72.988 1 43.17 ? O4 62C 1001 A 1 HETATM 23 O O5 62C . . . B 2 66.798 -48.59 -69.893 1 41.23 ? O5 62C 1001 A 1 HETATM 24 O O6 62C . . . B 2 67.275 -51.325 -70.116 1 49.72 ? O6 62C 1001 A 1 HETATM 25 H H41 62C . . . B 2 67.353 -49.783 -72.156 1 57.11 ? H41 62C 1001 A 1 HETATM 26 H H51 62C . . . B 2 65.046 -49.057 -70.676 1 56.71 ? H51 62C 1001 A 1 HETATM 27 H H61 62C . . . B 2 65.359 -51.365 -70.547 1 56.94 ? H61 62C 1001 A 1 HETATM 28 H H62 62C . . . B 2 65.684 -50.714 -69.141 1 56.94 ? H62 62C 1001 A 1 HETATM 29 H H101 62C . . . B 2 67.641 -43.348 -72.909 1 61.29 ? H101 62C 1001 A 1 HETATM 30 H H131 62C . . . B 2 67.437 -41.505 -73.667 1 77.34 ? H131 62C 1001 A 1 HETATM 31 H H171 62C . . . B 2 69.51 -40.188 -70.49 1 66.75 ? H171 62C 1001 A 1 HETATM 32 H H141 62C . . . B 2 67.539 -39.404 -74.617 1 78.93 ? H141 62C 1001 A 1 HETATM 33 H H111 62C . . . B 2 68.797 -42.542 -70.551 1 70.18 ? H111 62C 1001 A 1 HETATM 34 H H71 62C . . . B 2 66.68 -45.449 -72.684 1 58.55 ? H71 62C 1001 A 1 HETATM 35 H H21 62C . . . B 2 68.23 -47.366 -71.66 1 56.54 ? H21 62C 1001 A 1 HETATM 36 H H11 62C . . . B 2 67.302 -46.745 -69.644 1 50.45 ? H11 62C 1001 A 1 HETATM 37 H H12 62C . . . B 2 65.485 -45.906 -70.076 1 53.16 ? H12 62C 1001 A 1 HETATM 38 H H31 62C . . . B 2 65.646 -47.62 -72.768 1 56.76 ? H31 62C 1001 A 1 HETATM 39 H H32 62C . . . B 2 67.922 -48.436 -73.836 1 56.67 ? H32 62C 1001 A 1 HETATM 40 H H42 62C . . . B 2 65.897 -50.957 -73.03 1 51.8 ? H42 62C 1001 A 1 HETATM 41 H H63 62C . . . B 2 67.837 -50.728 -69.894 1 59.66 ? H63 62C 1001 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 41 #