data_5HG1 # _model_server_result.job_id cnVOlYbQPhhJbTOpGH987g _model_server_result.datetime_utc '2024-11-05 00:19:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hg1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1002}' # _entry.id 5HG1 # _exptl.entry_id 5HG1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 378.205 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-deoxy-2-{[(2E)-3-(3,4-dichlorophenyl)prop-2-enoyl]amino}-alpha-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5HG1 _cell.length_a 165.12 _cell.length_b 165.12 _cell.length_c 126.478 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HG1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C15 H17 Cl2 N O6' _chem_comp.formula_weight 378.205 _chem_comp.id 62C _chem_comp.mon_nstd_flag . _chem_comp.name 2-deoxy-2-{[(2E)-3-(3,4-dichlorophenyl)prop-2-enoyl]amino}-alpha-D-glucopyranose _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C3 62C sing 1 n n CL2 C15 62C sing 2 n n C14 C13 62C doub 3 n y C14 C15 62C sing 4 n y C13 C12 62C sing 5 n y C15 C16 62C doub 6 n y O4 C4 62C sing 7 n n C3 C4 62C sing 8 n n C3 C2 62C sing 9 n n C4 C5 62C sing 10 n n N7 C2 62C sing 11 n n N7 C8 62C sing 12 n n C10 C8 62C sing 13 n n C10 C11 62C doub 14 e n C12 C11 62C sing 15 n n C12 C17 62C doub 16 n y C16 C17 62C sing 17 n y C16 CL1 62C sing 18 n n C2 C1 62C sing 19 n n C8 O9 62C doub 20 n n C5 C6 62C sing 21 n n C5 O5 62C sing 22 n n C1 O1 62C sing 23 n n C1 O5 62C sing 24 n n O6 C6 62C sing 25 n n C4 H41 62C sing 26 n n C5 H51 62C sing 27 n n C6 H61 62C sing 28 n n C6 H62 62C sing 29 n n C10 H101 62C sing 30 n n C13 H131 62C sing 31 n n C17 H171 62C sing 32 n n C14 H141 62C sing 33 n n C11 H111 62C sing 34 n n N7 H71 62C sing 35 n n C2 H21 62C sing 36 n n C1 H11 62C sing 37 n n O1 H12 62C sing 38 n n C3 H31 62C sing 39 n n O3 H32 62C sing 40 n n O4 H42 62C sing 41 n n O6 H63 62C sing 42 n n # _atom_sites.entry_id 5HG1 _atom_sites.fract_transf_matrix[1][1] 0.006056 _atom_sites.fract_transf_matrix[1][2] 0.003497 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006993 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007907 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 62C A 1 1001 1 62C LIG . C 2 62C A 1 1002 2 62C LIG . D 3 BG6 A 1 1003 1 BG6 G6P . E 4 FLC A 1 1004 1 FLC FLC . F 5 HOH A 1 1101 6 HOH HOH . F 5 HOH A 2 1102 1 HOH HOH . F 5 HOH A 3 1103 5 HOH HOH . F 5 HOH A 4 1104 2 HOH HOH . F 5 HOH A 5 1105 8 HOH HOH . F 5 HOH A 6 1106 3 HOH HOH . F 5 HOH A 7 1107 7 HOH HOH . F 5 HOH A 8 1108 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 62C . . . C 2 44.582 -54.511 -10.684 1 63.64 ? C4 62C 1002 A 1 HETATM 2 C C5 62C . . . C 2 45.181 -54.855 -9.313 1 58.51 ? C5 62C 1002 A 1 HETATM 3 C C6 62C . . . C 2 45.866 -53.683 -8.653 1 58.52 ? C6 62C 1002 A 1 HETATM 4 C C8 62C . . . C 2 40.571 -57.291 -10.263 1 69.79 ? C8 62C 1002 A 1 HETATM 5 C C10 62C . . . C 2 39.892 -58.505 -10.772 1 75.34 ? C10 62C 1002 A 1 HETATM 6 C C13 62C . . . C 2 37.7 -59.965 -12.728 1 100.3 ? C13 62C 1002 A 1 HETATM 7 C C15 62C . . . C 2 36.236 -61.815 -12.319 1 111.14 ? C15 62C 1002 A 1 HETATM 8 C C17 62C . . . C 2 37.046 -60.49 -10.48 1 98.86 ? C17 62C 1002 A 1 HETATM 9 CL CL1 62C . . . C 2 35.413 -62.526 -9.811 1 119.49 ? CL1 62C 1002 A 1 HETATM 10 C C16 62C . . . C 2 36.287 -61.545 -10.955 1 105.4 ? C16 62C 1002 A 1 HETATM 11 CL CL2 62C . . . C 2 35.296 -63.135 -12.942 1 128.21 ? CL2 62C 1002 A 1 HETATM 12 C C14 62C . . . C 2 36.944 -61.02 -13.204 1 100.34 ? C14 62C 1002 A 1 HETATM 13 C C12 62C . . . C 2 37.769 -59.685 -11.365 1 95.3 ? C12 62C 1002 A 1 HETATM 14 C C11 62C . . . C 2 38.565 -58.555 -10.869 1 83.43 ? C11 62C 1002 A 1 HETATM 15 O O9 62C . . . C 2 39.979 -56.415 -9.61 1 73.14 ? O9 62C 1002 A 1 HETATM 16 N N7 62C . . . C 2 41.888 -57.193 -10.569 1 61.97 ? N7 62C 1002 A 1 HETATM 17 C C2 62C . . . C 2 42.684 -56.058 -10.123 1 60.03 ? C2 62C 1002 A 1 HETATM 18 C C1 62C . . . C 2 43.446 -56.394 -8.844 1 62.95 ? C1 62C 1002 A 1 HETATM 19 O O1 62C . . . C 2 44.334 -57.436 -9.091 1 60.42 ? O1 62C 1002 A 1 HETATM 20 C C3 62C . . . C 2 43.669 -55.62 -11.202 1 63.05 ? C3 62C 1002 A 1 HETATM 21 O O3 62C . . . C 2 42.95 -55.136 -12.323 1 65.13 ? O3 62C 1002 A 1 HETATM 22 O O4 62C . . . C 2 45.624 -54.298 -11.629 1 61.69 ? O4 62C 1002 A 1 HETATM 23 O O5 62C . . . C 2 44.143 -55.258 -8.41 1 57.89 ? O5 62C 1002 A 1 HETATM 24 O O6 62C . . . C 2 45.01 -52.55 -8.611 1 57.97 ? O6 62C 1002 A 1 HETATM 25 H H41 62C . . . C 2 44.062 -53.696 -10.6 1 76.37 ? H41 62C 1002 A 1 HETATM 26 H H51 62C . . . C 2 45.812 -55.584 -9.416 1 70.21 ? H51 62C 1002 A 1 HETATM 27 H H61 62C . . . C 2 46.667 -53.461 -9.154 1 70.22 ? H61 62C 1002 A 1 HETATM 28 H H62 62C . . . C 2 46.115 -53.928 -7.748 1 70.22 ? H62 62C 1002 A 1 HETATM 29 H H101 62C . . . C 2 40.399 -59.239 -11.032 1 90.41 ? H101 62C 1002 A 1 HETATM 30 H H131 62C . . . C 2 38.172 -59.434 -13.328 1 120.36 ? H131 62C 1002 A 1 HETATM 31 H H171 62C . . . C 2 37.076 -60.317 -9.567 1 118.63 ? H171 62C 1002 A 1 HETATM 32 H H141 62C . . . C 2 36.912 -61.196 -14.116 1 120.41 ? H141 62C 1002 A 1 HETATM 33 H H111 62C . . . C 2 38.097 -57.797 -10.603 1 100.11 ? H111 62C 1002 A 1 HETATM 34 H H71 62C . . . C 2 42.264 -57.821 -11.02 1 74.36 ? H71 62C 1002 A 1 HETATM 35 H H21 62C . . . C 2 42.087 -55.316 -9.936 1 72.03 ? H21 62C 1002 A 1 HETATM 36 H H11 62C . . . C 2 42.814 -56.661 -8.158 1 75.54 ? H11 62C 1002 A 1 HETATM 37 H H12 62C . . . C 2 44.907 -57.474 -8.465 1 72.5 ? H12 62C 1002 A 1 HETATM 38 H H31 62C . . . C 2 44.21 -56.38 -11.467 1 75.66 ? H31 62C 1002 A 1 HETATM 39 H H32 62C . . . C 2 42.689 -54.342 -12.17 1 78.16 ? H32 62C 1002 A 1 HETATM 40 H H42 62C . . . C 2 45.35 -54.509 -12.406 1 74.03 ? H42 62C 1002 A 1 HETATM 41 H H63 62C . . . C 2 44.202 -52.808 -8.565 1 69.57 ? H63 62C 1002 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 41 #