data_5HG9 # _model_server_result.job_id kVi-st12_APNSJvPWR2LmA _model_server_result.datetime_utc '2024-10-10 04:16:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hg9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":9001}' # _entry.id 5HG9 # _exptl.entry_id 5HG9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 437.419 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[(3R,4R)-3-[({2-[(1-methyl-1H-pyrazol-4-yl)amino]-7H-pyrrolo[2,3-d]pyrimidin-4-yl}oxy)methyl]-4-(trifluoromethyl)pyrrolidin-1-yl]propan-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HG9 _cell.length_a 35.205 _cell.length_b 69.879 _cell.length_c 113.554 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HG9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 104 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 797 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C12 _struct_conn.ptnr2_label_comp_id 63A _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 63A _struct_conn.ptnr2_auth_seq_id 9001 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.808 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C19 H22 F3 N7 O2' _chem_comp.formula_weight 437.419 _chem_comp.id 63A _chem_comp.mon_nstd_flag . _chem_comp.name 1-[(3R,4R)-3-[({2-[(1-methyl-1H-pyrazol-4-yl)amino]-7H-pyrrolo[2,3-d]pyrimidin-4-yl}oxy)methyl]-4-(trifluoromethyl)pyrrolidin-1-yl]propan-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Bound form of 1-[(3R,4R)-3-[({2-[(1-methyl-1H-pyrazol-4-yl)amino]-7H-pyrrolo[2,3-d]pyrimidin-4-yl}oxy)methyl]-4-(trifluoromethyl)pyrrolidin-1-yl]prop-2-en-1-one' # _atom_sites.entry_id 5HG9 _atom_sites.fract_transf_matrix[1][1] 0.028405 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01431 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 63A A 1 9001 9001 63A LIG . C 3 SO4 A 1 9002 9002 SO4 SO4 . D 3 SO4 A 1 9003 9003 SO4 SO4 . E 4 GOL A 1 9004 9004 GOL GOL . F 4 GOL A 1 9005 9005 GOL GOL . G 4 GOL A 1 9006 9006 GOL GOL . H 5 HOH A 1 9101 82 HOH WAT . H 5 HOH A 2 9102 43 HOH WAT . H 5 HOH A 3 9103 42 HOH WAT . H 5 HOH A 4 9104 32 HOH WAT . H 5 HOH A 5 9105 30 HOH WAT . H 5 HOH A 6 9106 122 HOH WAT . H 5 HOH A 7 9107 34 HOH WAT . H 5 HOH A 8 9108 14 HOH WAT . H 5 HOH A 9 9109 91 HOH WAT . H 5 HOH A 10 9110 72 HOH WAT . H 5 HOH A 11 9111 101 HOH WAT . H 5 HOH A 12 9112 2 HOH WAT . H 5 HOH A 13 9113 73 HOH WAT . H 5 HOH A 14 9114 61 HOH WAT . H 5 HOH A 15 9115 127 HOH WAT . H 5 HOH A 16 9116 20 HOH WAT . H 5 HOH A 17 9117 55 HOH WAT . H 5 HOH A 18 9118 48 HOH WAT . H 5 HOH A 19 9119 105 HOH WAT . H 5 HOH A 20 9120 23 HOH WAT . H 5 HOH A 21 9121 117 HOH WAT . H 5 HOH A 22 9122 120 HOH WAT . H 5 HOH A 23 9123 123 HOH WAT . H 5 HOH A 24 9124 56 HOH WAT . H 5 HOH A 25 9125 106 HOH WAT . H 5 HOH A 26 9126 45 HOH WAT . H 5 HOH A 27 9127 68 HOH WAT . H 5 HOH A 28 9128 84 HOH WAT . H 5 HOH A 29 9129 11 HOH WAT . H 5 HOH A 30 9130 69 HOH WAT . H 5 HOH A 31 9131 39 HOH WAT . H 5 HOH A 32 9132 29 HOH WAT . H 5 HOH A 33 9133 124 HOH WAT . H 5 HOH A 34 9134 6 HOH WAT . H 5 HOH A 35 9135 67 HOH WAT . H 5 HOH A 36 9136 17 HOH WAT . H 5 HOH A 37 9137 64 HOH WAT . H 5 HOH A 38 9138 35 HOH WAT . H 5 HOH A 39 9139 24 HOH WAT . H 5 HOH A 40 9140 104 HOH WAT . H 5 HOH A 41 9141 12 HOH WAT . H 5 HOH A 42 9142 46 HOH WAT . H 5 HOH A 43 9143 74 HOH WAT . H 5 HOH A 44 9144 3 HOH WAT . H 5 HOH A 45 9145 41 HOH WAT . H 5 HOH A 46 9146 121 HOH WAT . H 5 HOH A 47 9147 33 HOH WAT . H 5 HOH A 48 9148 109 HOH WAT . H 5 HOH A 49 9149 97 HOH WAT . H 5 HOH A 50 9150 5 HOH WAT . H 5 HOH A 51 9151 95 HOH WAT . H 5 HOH A 52 9152 1 HOH WAT . H 5 HOH A 53 9153 125 HOH WAT . H 5 HOH A 54 9154 21 HOH WAT . H 5 HOH A 55 9155 47 HOH WAT . H 5 HOH A 56 9156 7 HOH WAT . H 5 HOH A 57 9157 19 HOH WAT . H 5 HOH A 58 9158 66 HOH WAT . H 5 HOH A 59 9159 25 HOH WAT . H 5 HOH A 60 9160 128 HOH WAT . H 5 HOH A 61 9161 40 HOH WAT . H 5 HOH A 62 9162 103 HOH WAT . H 5 HOH A 63 9163 54 HOH WAT . H 5 HOH A 64 9164 38 HOH WAT . H 5 HOH A 65 9165 94 HOH WAT . H 5 HOH A 66 9166 102 HOH WAT . H 5 HOH A 67 9167 75 HOH WAT . H 5 HOH A 68 9168 93 HOH WAT . H 5 HOH A 69 9169 62 HOH WAT . H 5 HOH A 70 9170 108 HOH WAT . H 5 HOH A 71 9171 15 HOH WAT . H 5 HOH A 72 9172 65 HOH WAT . H 5 HOH A 73 9173 80 HOH WAT . H 5 HOH A 74 9174 52 HOH WAT . H 5 HOH A 75 9175 60 HOH WAT . H 5 HOH A 76 9176 76 HOH WAT . H 5 HOH A 77 9177 9 HOH WAT . H 5 HOH A 78 9178 26 HOH WAT . H 5 HOH A 79 9179 50 HOH WAT . H 5 HOH A 80 9180 31 HOH WAT . H 5 HOH A 81 9181 53 HOH WAT . H 5 HOH A 82 9182 44 HOH WAT . H 5 HOH A 83 9183 136 HOH WAT . H 5 HOH A 84 9184 13 HOH WAT . H 5 HOH A 85 9185 77 HOH WAT . H 5 HOH A 86 9186 99 HOH WAT . H 5 HOH A 87 9187 51 HOH WAT . H 5 HOH A 88 9188 81 HOH WAT . H 5 HOH A 89 9189 87 HOH WAT . H 5 HOH A 90 9190 131 HOH WAT . H 5 HOH A 91 9191 10 HOH WAT . H 5 HOH A 92 9192 71 HOH WAT . H 5 HOH A 93 9193 119 HOH WAT . H 5 HOH A 94 9194 16 HOH WAT . H 5 HOH A 95 9195 8 HOH WAT . H 5 HOH A 96 9196 37 HOH WAT . H 5 HOH A 97 9197 92 HOH WAT . H 5 HOH A 98 9198 59 HOH WAT . H 5 HOH A 99 9199 134 HOH WAT . H 5 HOH A 100 9200 129 HOH WAT . H 5 HOH A 101 9201 57 HOH WAT . H 5 HOH A 102 9202 4 HOH WAT . H 5 HOH A 103 9203 22 HOH WAT . H 5 HOH A 104 9204 28 HOH WAT . H 5 HOH A 105 9205 98 HOH WAT . H 5 HOH A 106 9206 18 HOH WAT . H 5 HOH A 107 9207 58 HOH WAT . H 5 HOH A 108 9208 27 HOH WAT . H 5 HOH A 109 9209 89 HOH WAT . H 5 HOH A 110 9210 36 HOH WAT . H 5 HOH A 111 9211 88 HOH WAT . H 5 HOH A 112 9212 63 HOH WAT . H 5 HOH A 113 9213 86 HOH WAT . H 5 HOH A 114 9214 114 HOH WAT . H 5 HOH A 115 9215 133 HOH WAT . H 5 HOH A 116 9216 100 HOH WAT . H 5 HOH A 117 9217 79 HOH WAT . H 5 HOH A 118 9218 112 HOH WAT . H 5 HOH A 119 9219 118 HOH WAT . H 5 HOH A 120 9220 70 HOH WAT . H 5 HOH A 121 9221 96 HOH WAT . H 5 HOH A 122 9222 90 HOH WAT . H 5 HOH A 123 9223 78 HOH WAT . H 5 HOH A 124 9224 132 HOH WAT . H 5 HOH A 125 9225 85 HOH WAT . H 5 HOH A 126 9226 83 HOH WAT . H 5 HOH A 127 9227 126 HOH WAT . H 5 HOH A 128 9228 110 HOH WAT . H 5 HOH A 129 9229 49 HOH WAT . H 5 HOH A 130 9230 130 HOH WAT . H 5 HOH A 131 9231 111 HOH WAT . H 5 HOH A 132 9232 115 HOH WAT . H 5 HOH A 133 9233 116 HOH WAT . H 5 HOH A 134 9234 113 HOH WAT . H 5 HOH A 135 9235 135 HOH WAT . H 5 HOH A 136 9236 107 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N3 63A . . . B 2 -14.517 18.11 -24.045 1 43.9 ? N3 63A 9001 A 1 HETATM 2 C C4 63A . . . B 2 -13.697 19.271 -24.435 1 46 ? C4 63A 9001 A 1 HETATM 3 C C5 63A . . . B 2 -13.87 19.42 -25.961 1 47.78 ? C5 63A 9001 A 1 HETATM 4 C C6 63A . . . B 2 -14.815 20.586 -26.34 1 49.97 ? C6 63A 9001 A 1 HETATM 5 C C10 63A . . . B 2 -14.703 17.567 -22.761 1 41.7 ? C10 63A 9001 A 1 HETATM 6 C C20 63A . . . B 2 -11.086 14.285 -29.555 1 24.08 ? C20 63A 9001 A 1 HETATM 7 C C21 63A . . . B 2 -11.468 15.622 -29.312 1 26.57 ? C21 63A 9001 A 1 HETATM 8 C C22 63A . . . B 2 -10.487 16.452 -29.91 1 24.62 ? C22 63A 9001 A 1 HETATM 9 C C26 63A . . . B 2 -14.805 12.238 -27.249 1 27.68 ? C26 63A 9001 A 1 HETATM 10 C C1 63A . . . B 2 -14.424 18.057 -26.426 1 43.76 ? C1 63A 9001 A 1 HETATM 11 C C2 63A . . . B 2 -15.176 17.524 -25.201 1 45.09 ? C2 63A 9001 A 1 HETATM 12 F F7 63A . . . B 2 -14.957 20.671 -27.684 1 49.48 ? F7 63A 9001 A 1 HETATM 13 F F8 63A . . . B 2 -16.058 20.458 -25.819 1 51.73 ? F8 63A 9001 A 1 HETATM 14 F F9 63A . . . B 2 -14.313 21.773 -25.924 1 52.89 ? F9 63A 9001 A 1 HETATM 15 C C11 63A . . . B 2 -13.956 18.263 -21.62 1 36.82 ? C11 63A 9001 A 1 HETATM 16 C C12 63A . . . B 2 -14.006 17.529 -20.282 1 32.82 ? C12 63A 9001 A 1 HETATM 17 O O13 63A . . . B 2 -15.427 16.584 -22.554 1 44.04 ? O13 63A 9001 A 1 HETATM 18 C C14 63A . . . B 2 -13.271 17.13 -26.801 1 40.46 ? C14 63A 9001 A 1 HETATM 19 O O15 63A . . . B 2 -13.194 17.01 -28.24 1 30.69 ? O15 63A 9001 A 1 HETATM 20 C C16 63A . . . B 2 -12.665 15.772 -28.574 1 26.9 ? C16 63A 9001 A 1 HETATM 21 N N17 63A . . . B 2 -13.346 14.654 -28.158 1 24.7 ? N17 63A 9001 A 1 HETATM 22 C C18 63A . . . B 2 -12.895 13.394 -28.442 1 25.49 ? C18 63A 9001 A 1 HETATM 23 N N19 63A . . . B 2 -11.746 13.151 -29.154 1 25.82 ? N19 63A 9001 A 1 HETATM 24 C C23 63A . . . B 2 -9.546 15.619 -30.496 1 25.08 ? C23 63A 9001 A 1 HETATM 25 N N24 63A . . . B 2 -9.924 14.313 -30.272 1 23.67 ? N24 63A 9001 A 1 HETATM 26 N N25 63A . . . B 2 -13.644 12.28 -27.976 1 26.34 ? N25 63A 9001 A 1 HETATM 27 C C27 63A . . . B 2 -15.432 11.079 -26.855 1 27.31 ? C27 63A 9001 A 1 HETATM 28 N N28 63A . . . B 2 -16.535 11.47 -26.155 1 29.2 ? N28 63A 9001 A 1 HETATM 29 N N29 63A . . . B 2 -16.681 12.802 -26.062 1 30.29 ? N29 63A 9001 A 1 HETATM 30 C C30 63A . . . B 2 -15.627 13.27 -26.729 1 27.83 ? C30 63A 9001 A 1 HETATM 31 C C31 63A . . . B 2 -17.515 10.615 -25.532 1 33.95 ? C31 63A 9001 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 31 #