data_5HI2 # _model_server_result.job_id UGHLjUJGE4hRZEctKksJNw _model_server_result.datetime_utc '2024-10-10 13:23:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hi2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 5HI2 # _exptl.entry_id 5HI2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 464.825 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{4-[({[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]AMINO}CARBONYL)AMINO]PHENOXY}-N-METHYLPYRIDINE-2-CARBOXAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HI2 _cell.length_a 49.625 _cell.length_b 114.92 _cell.length_c 101.544 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HI2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H16 Cl F3 N4 O3' _chem_comp.formula_weight 464.825 _chem_comp.id BAX _chem_comp.mon_nstd_flag . _chem_comp.name 4-{4-[({[4-CHLORO-3-(TRIFLUOROMETHYL)PHENYL]AMINO}CARBONYL)AMINO]PHENOXY}-N-METHYLPYRIDINE-2-CARBOXAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Sorafenib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BAX doub 70 n y C1 C6 BAX sing 71 n y C1 H1 BAX sing 72 n n C2 C3 BAX sing 73 n y C2 N12 BAX sing 74 n n C3 C4 BAX doub 75 n y C3 H3 BAX sing 76 n n C4 C5 BAX sing 77 n y C4 H4 BAX sing 78 n n C13 N12 BAX sing 79 n n C13 N14 BAX sing 80 n n C13 O15 BAX doub 81 n n C16 C17 BAX doub 82 n y C16 C21 BAX sing 83 n y C16 N14 BAX sing 84 n n C17 C18 BAX sing 85 n y C17 H17 BAX sing 86 n n C18 C19 BAX doub 87 n y C18 H18 BAX sing 88 n n C19 C20 BAX sing 89 n y C19 O22 BAX sing 90 n n C20 C21 BAX doub 91 n y C20 H20 BAX sing 92 n n C21 H21 BAX sing 93 n n O22 C23 BAX sing 94 n n C24 C25 BAX doub 95 n y C24 C23 BAX sing 96 n y C24 H24 BAX sing 97 n n C25 N26 BAX sing 98 n y C25 H25 BAX sing 99 n n C27 C28 BAX sing 100 n y C27 N26 BAX doub 101 n y C27 C29 BAX sing 102 n n C28 C23 BAX doub 103 n y C28 H28 BAX sing 104 n n N30 C31 BAX sing 105 n n N30 C29 BAX sing 106 n n N30 H30 BAX sing 107 n n C31 H311 BAX sing 108 n n C31 H312 BAX sing 109 n n C31 H313 BAX sing 110 n n C5 C6 BAX doub 111 n y C5 CL11 BAX sing 112 n n C6 C7 BAX sing 113 n n C7 F8 BAX sing 114 n n C7 F9 BAX sing 115 n n C7 F10 BAX sing 116 n n N12 H12 BAX sing 117 n n N14 H14 BAX sing 118 n n C29 O32 BAX doub 119 n n # _atom_sites.entry_id 5HI2 _atom_sites.fract_transf_matrix[1][1] 0.020151 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008702 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009848 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BAX A 1 801 1 BAX BAX . C 3 HOH A 1 901 7 HOH HOH . C 3 HOH A 2 902 25 HOH HOH . C 3 HOH A 3 903 9 HOH HOH . C 3 HOH A 4 904 26 HOH HOH . C 3 HOH A 5 905 5 HOH HOH . C 3 HOH A 6 906 14 HOH HOH . C 3 HOH A 7 907 12 HOH HOH . C 3 HOH A 8 908 16 HOH HOH . C 3 HOH A 9 909 15 HOH HOH . C 3 HOH A 10 910 13 HOH HOH . C 3 HOH A 11 911 24 HOH HOH . C 3 HOH A 12 912 23 HOH HOH . C 3 HOH A 13 913 20 HOH HOH . C 3 HOH A 14 914 11 HOH HOH . C 3 HOH A 15 915 28 HOH HOH . C 3 HOH A 16 916 4 HOH HOH . C 3 HOH A 17 917 10 HOH HOH . C 3 HOH A 18 918 27 HOH HOH . C 3 HOH A 19 919 18 HOH HOH . C 3 HOH A 20 920 6 HOH HOH . C 3 HOH A 21 921 21 HOH HOH . C 3 HOH A 22 922 3 HOH HOH . C 3 HOH A 23 923 17 HOH HOH . C 3 HOH A 24 924 2 HOH HOH . C 3 HOH A 25 925 19 HOH HOH . C 3 HOH A 26 926 1 HOH HOH . C 3 HOH A 27 927 8 HOH HOH . C 3 HOH A 28 928 29 HOH HOH . C 3 HOH A 29 929 22 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BAX . . . B 2 25.008 11.015 -12.76 1 23.21 ? C1 BAX 801 A 1 HETATM 2 C C2 BAX . . . B 2 25.897 10.417 -11.879 1 18.56 ? C2 BAX 801 A 1 HETATM 3 C C3 BAX . . . B 2 25.442 9.526 -10.924 1 16.42 ? C3 BAX 801 A 1 HETATM 4 C C4 BAX . . . B 2 24.099 9.244 -10.859 1 14.55 ? C4 BAX 801 A 1 HETATM 5 C C13 BAX . . . B 2 27.803 11.866 -12.25 1 17.72 ? C13 BAX 801 A 1 HETATM 6 C C16 BAX . . . B 2 29.987 13.008 -12.519 1 19.28 ? C16 BAX 801 A 1 HETATM 7 C C17 BAX . . . B 2 29.56 14.308 -12.263 1 18.25 ? C17 BAX 801 A 1 HETATM 8 C C18 BAX . . . B 2 30.406 15.379 -12.488 1 20.01 ? C18 BAX 801 A 1 HETATM 9 C C19 BAX . . . B 2 31.696 15.151 -12.942 1 14.71 ? C19 BAX 801 A 1 HETATM 10 C C20 BAX . . . B 2 32.134 13.853 -13.166 1 12.44 ? C20 BAX 801 A 1 HETATM 11 C C21 BAX . . . B 2 31.294 12.783 -12.957 1 17.77 ? C21 BAX 801 A 1 HETATM 12 O O22 BAX . . . B 2 32.556 16.186 -13.136 1 15.16 ? O22 BAX 801 A 1 HETATM 13 C C24 BAX . . . B 2 31.679 17.141 -15.204 1 22.63 ? C24 BAX 801 A 1 HETATM 14 C C25 BAX . . . B 2 31.51 18.286 -15.976 1 20.06 ? C25 BAX 801 A 1 HETATM 15 C C27 BAX . . . B 2 32.55 19.598 -14.397 1 12.58 ? C27 BAX 801 A 1 HETATM 16 C C28 BAX . . . B 2 32.759 18.505 -13.566 1 15.27 ? C28 BAX 801 A 1 HETATM 17 N N30 BAX . . . B 2 32.837 22.039 -14.574 1 7.68 ? N30 BAX 801 A 1 HETATM 18 C C31 BAX . . . B 2 33.281 23.276 -13.933 1 7.31 ? C31 BAX 801 A 1 HETATM 19 C C5 BAX . . . B 2 23.233 9.858 -11.751 1 18.35 ? C5 BAX 801 A 1 HETATM 20 C C6 BAX . . . B 2 23.668 10.751 -12.697 1 19.27 ? C6 BAX 801 A 1 HETATM 21 C C7 BAX . . . B 2 22.705 11.397 -13.666 1 27.32 ? C7 BAX 801 A 1 HETATM 22 F F8 BAX . . . B 2 23.368 12.261 -14.531 1 33.97 ? F8 BAX 801 A 1 HETATM 23 F F9 BAX . . . B 2 22.19 10.389 -14.49 1 28.07 ? F9 BAX 801 A 1 HETATM 24 F F10 BAX . . . B 2 21.708 12.127 -12.985 1 26.49 ? F10 BAX 801 A 1 HETATM 25 CL CL11 BAX . . . B 2 21.547 9.535 -11.664 1 37.58 ? CL11 BAX 801 A 1 HETATM 26 N N12 BAX . . . B 2 27.257 10.67 -11.958 1 17.18 ? N12 BAX 801 A 1 HETATM 27 N N14 BAX . . . B 2 29.159 11.899 -12.277 1 14.49 ? N14 BAX 801 A 1 HETATM 28 O O15 BAX . . . B 2 27.105 12.843 -12.47 1 20.3 ? O15 BAX 801 A 1 HETATM 29 C C23 BAX . . . B 2 32.317 17.247 -13.96 1 20.14 ? C23 BAX 801 A 1 HETATM 30 N N26 BAX . . . B 2 31.925 19.47 -15.563 1 15.38 ? N26 BAX 801 A 1 HETATM 31 C C29 BAX . . . B 2 32.995 20.91 -13.892 1 9.42 ? C29 BAX 801 A 1 HETATM 32 O O32 BAX . . . B 2 33.468 20.973 -12.782 1 17.39 ? O32 BAX 801 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 32 #