data_5HIE # _model_server_result.job_id cUaeW_cfANeHcR72vEojhg _model_server_result.datetime_utc '2024-10-10 15:17:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hie # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":801}' # _entry.id 5HIE # _exptl.entry_id 5HIE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 519.562 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Dabrafenib _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.79 _cell.angle_gamma 90 _cell.entry_id 5HIE _cell.length_a 65.413 _cell.length_b 127.786 _cell.length_c 83.135 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HIE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I 1 1 B,F,J 2 1 C,G,K 3 1 D,H,L 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C23 H20 F3 N5 O2 S2' _chem_comp.formula_weight 519.562 _chem_comp.id P06 _chem_comp.mon_nstd_flag . _chem_comp.name Dabrafenib _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-{3-[5-(2-aminopyrimidin-4-yl)-2-tert-butyl-1,3-thiazol-4-yl]-2-fluorophenyl}-2,6-difluorobenzenesulfonamide # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C47 C50 P06 doub 237 n y C47 C44 P06 sing 238 n y C50 C49 P06 sing 239 n y C44 C46 P06 doub 240 n y C49 F52 P06 sing 241 n n C49 C43 P06 doub 242 n y C46 C43 P06 sing 243 n y C46 F53 P06 sing 244 n n C43 S42 P06 sing 245 n n C7 N6 P06 doub 246 n y C7 C4 P06 sing 247 n y N6 C1 P06 sing 248 n y C4 C2 P06 doub 249 n y S42 O55 P06 doub 250 n n S42 N40 P06 sing 251 n n S42 O54 P06 doub 252 n n C33 C37 P06 doub 253 n y C33 C31 P06 sing 254 n y C1 N9 P06 sing 255 n n C1 N3 P06 doub 256 n y N40 C31 P06 sing 257 n n C37 C35 P06 sing 258 n y C31 C32 P06 doub 259 n y C2 N3 P06 sing 260 n y C2 C12 P06 sing 261 n n C35 C30 P06 doub 262 n y C32 C30 P06 sing 263 n y C32 F39 P06 sing 264 n n C30 C16 P06 sing 265 n n C12 C16 P06 doub 266 n y C12 S13 P06 sing 267 n y C16 N15 P06 sing 268 n y S13 C14 P06 sing 269 n y N15 C14 P06 doub 270 n y C14 C17 P06 sing 271 n n C17 C26 P06 sing 272 n n C17 C18 P06 sing 273 n n C17 C22 P06 sing 274 n n C4 H1 P06 sing 275 n n C7 H2 P06 sing 276 n n N9 H3 P06 sing 277 n n N9 H4 P06 sing 278 n n C18 H5 P06 sing 279 n n C18 H6 P06 sing 280 n n C18 H7 P06 sing 281 n n C22 H8 P06 sing 282 n n C22 H9 P06 sing 283 n n C22 H10 P06 sing 284 n n C26 H11 P06 sing 285 n n C26 H12 P06 sing 286 n n C26 H13 P06 sing 287 n n C33 H14 P06 sing 288 n n C35 H15 P06 sing 289 n n C37 H16 P06 sing 290 n n N40 H17 P06 sing 291 n n C44 H18 P06 sing 292 n n C47 H19 P06 sing 293 n n C50 H20 P06 sing 294 n n # _atom_sites.entry_id 5HIE _atom_sites.fract_transf_matrix[1][1] 0.015287 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004323 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007826 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0125 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 P06 A 1 801 2 P06 P06 . F 2 P06 B 1 801 1 P06 P06 . G 2 P06 C 1 801 3 P06 P06 . H 2 P06 D 1 801 4 P06 P06 . I 3 HOH A 1 901 46 HOH HOH . I 3 HOH A 2 902 27 HOH HOH . I 3 HOH A 3 903 64 HOH HOH . I 3 HOH A 4 904 69 HOH HOH . I 3 HOH A 5 905 66 HOH HOH . I 3 HOH A 6 906 9 HOH HOH . I 3 HOH A 7 907 24 HOH HOH . I 3 HOH A 8 908 45 HOH HOH . I 3 HOH A 9 909 53 HOH HOH . I 3 HOH A 10 910 57 HOH HOH . I 3 HOH A 11 911 55 HOH HOH . I 3 HOH A 12 912 28 HOH HOH . I 3 HOH A 13 913 48 HOH HOH . I 3 HOH A 14 914 49 HOH HOH . I 3 HOH A 15 915 43 HOH HOH . I 3 HOH A 16 916 44 HOH HOH . I 3 HOH A 17 917 4 HOH HOH . I 3 HOH A 18 918 52 HOH HOH . I 3 HOH A 19 919 47 HOH HOH . I 3 HOH A 20 920 6 HOH HOH . J 3 HOH B 1 901 62 HOH HOH . J 3 HOH B 2 902 8 HOH HOH . J 3 HOH B 3 903 26 HOH HOH . J 3 HOH B 4 904 68 HOH HOH . J 3 HOH B 5 905 29 HOH HOH . J 3 HOH B 6 906 23 HOH HOH . J 3 HOH B 7 907 67 HOH HOH . J 3 HOH B 8 908 59 HOH HOH . J 3 HOH B 9 909 40 HOH HOH . J 3 HOH B 10 910 61 HOH HOH . J 3 HOH B 11 911 60 HOH HOH . J 3 HOH B 12 912 41 HOH HOH . J 3 HOH B 13 913 2 HOH HOH . J 3 HOH B 14 914 42 HOH HOH . K 3 HOH C 1 901 20 HOH HOH . K 3 HOH C 2 902 1 HOH HOH . K 3 HOH C 3 903 5 HOH HOH . K 3 HOH C 4 904 25 HOH HOH . K 3 HOH C 5 905 3 HOH HOH . K 3 HOH C 6 906 7 HOH HOH . L 3 HOH D 1 901 63 HOH HOH . L 3 HOH D 2 902 30 HOH HOH . L 3 HOH D 3 903 65 HOH HOH . L 3 HOH D 4 904 54 HOH HOH . L 3 HOH D 5 905 22 HOH HOH . L 3 HOH D 6 906 56 HOH HOH . L 3 HOH D 7 907 51 HOH HOH . L 3 HOH D 8 908 58 HOH HOH . L 3 HOH D 9 909 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 P06 . . . G 2 -54.134 -33.95 109.922 1 54.15 ? C1 P06 801 C 1 HETATM 2 C C2 P06 . . . G 2 -52.4 -33.187 108.552 1 55.18 ? C2 P06 801 C 1 HETATM 3 N N3 P06 . . . G 2 -53.642 -33.693 108.711 1 54.82 ? N3 P06 801 C 1 HETATM 4 C C4 P06 . . . G 2 -51.658 -32.869 109.705 1 55.58 ? C4 P06 801 C 1 HETATM 5 N N6 P06 . . . G 2 -53.416 -33.699 111.008 1 55.48 ? N6 P06 801 C 1 HETATM 6 C C7 P06 . . . G 2 -52.196 -33.18 110.939 1 55.57 ? C7 P06 801 C 1 HETATM 7 N N9 P06 . . . G 2 -55.398 -34.499 110.07 1 52.04 ? N9 P06 801 C 1 HETATM 8 C C12 P06 . . . G 2 -51.937 -32.836 107.188 1 54.74 ? C12 P06 801 C 1 HETATM 9 S S13 P06 . . . G 2 -53.038 -32.856 105.811 1 54.78 ? S13 P06 801 C 1 HETATM 10 C C14 P06 . . . G 2 -51.839 -32.252 104.759 1 55.01 ? C14 P06 801 C 1 HETATM 11 N N15 P06 . . . G 2 -50.746 -32.093 105.417 1 54.94 ? N15 P06 801 C 1 HETATM 12 C C16 P06 . . . G 2 -50.722 -32.359 106.711 1 53.97 ? C16 P06 801 C 1 HETATM 13 C C17 P06 . . . G 2 -52.011 -31.986 103.275 1 53.69 ? C17 P06 801 C 1 HETATM 14 C C18 P06 . . . G 2 -53.446 -31.542 102.959 1 51.06 ? C18 P06 801 C 1 HETATM 15 C C22 P06 . . . G 2 -51.076 -30.865 102.816 1 53.69 ? C22 P06 801 C 1 HETATM 16 C C26 P06 . . . G 2 -51.655 -33.257 102.497 1 53.48 ? C26 P06 801 C 1 HETATM 17 C C30 P06 . . . G 2 -49.426 -32.155 107.403 1 52.32 ? C30 P06 801 C 1 HETATM 18 C C31 P06 . . . G 2 -47.496 -30.704 107.7 1 51.48 ? C31 P06 801 C 1 HETATM 19 C C32 P06 . . . G 2 -48.778 -30.929 107.214 1 53.84 ? C32 P06 801 C 1 HETATM 20 C C33 P06 . . . G 2 -46.837 -31.739 108.369 1 50.79 ? C33 P06 801 C 1 HETATM 21 C C35 P06 . . . G 2 -48.725 -33.208 108.008 1 50.65 ? C35 P06 801 C 1 HETATM 22 C C37 P06 . . . G 2 -47.452 -32.98 108.511 1 50.4 ? C37 P06 801 C 1 HETATM 23 F F39 P06 . . . G 2 -49.413 -29.939 106.56 1 57.27 ? F39 P06 801 C 1 HETATM 24 N N40 P06 . . . G 2 -46.982 -29.413 107.538 1 51.27 ? N40 P06 801 C 1 HETATM 25 S S42 P06 . . . G 2 -45.403 -28.974 107.719 1 56.55 ? S42 P06 801 C 1 HETATM 26 C C43 P06 . . . G 2 -45.106 -28.933 109.471 1 63.12 ? C43 P06 801 C 1 HETATM 27 C C44 P06 . . . G 2 -45.513 -27.901 111.628 1 64.09 ? C44 P06 801 C 1 HETATM 28 C C46 P06 . . . G 2 -45.736 -27.959 110.259 1 64.21 ? C46 P06 801 C 1 HETATM 29 C C47 P06 . . . G 2 -44.677 -28.817 112.241 1 64.24 ? C47 P06 801 C 1 HETATM 30 C C49 P06 . . . G 2 -44.252 -29.853 110.103 1 66.01 ? C49 P06 801 C 1 HETATM 31 C C50 P06 . . . G 2 -44.027 -29.77 111.476 1 65.1 ? C50 P06 801 C 1 HETATM 32 F F52 P06 . . . G 2 -43.609 -30.825 109.415 1 68.04 ? F52 P06 801 C 1 HETATM 33 F F53 P06 . . . G 2 -46.571 -27.048 109.723 1 64.36 ? F53 P06 801 C 1 HETATM 34 O O54 P06 . . . G 2 -44.621 -29.998 107.131 1 58.46 ? O54 P06 801 C 1 HETATM 35 O O55 P06 . . . G 2 -45.27 -27.638 107.255 1 55.19 ? O55 P06 801 C 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #