data_5HIO # _model_server_result.job_id JDORyjzeLzoWWjT-8Sta6A _model_server_result.datetime_utc '2024-11-01 17:22:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hio # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5HIO # _exptl.entry_id 5HIO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5HIO _cell.length_a 61.124 _cell.length_b 61.124 _cell.length_c 145.979 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HIO _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 84 A CYS 82 1_555 A SG CYS 129 A CYS 127 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc1 A NE2 HIS 71 A HIS 69 1_555 B FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc2 A ND1 HIS 73 A HIS 71 1_555 B FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc3 A OD2 ASP 75 A ASP 73 1_555 C FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc4 A NE2 HIS 76 A HIS 74 1_555 C FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc5 A NE2 HIS 161 A HIS 159 1_555 B FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc6 A OD2 ASP 180 A ASP 178 1_555 B FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc7 A OD2 ASP 180 A ASP 178 1_555 C FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc8 A NE2 HIS 223 A HIS 221 1_555 C FE FE . A FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc9 B FE FE . A FE 401 1_555 D O13 61M . A 61M 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? metalc ? metalc10 B FE FE . A FE 401 1_555 D O12 61M . A 61M 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc11 C FE FE . A FE 402 1_555 D O09 61M . A 61M 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc12 C FE FE . A FE 402 1_555 D O13 61M . A 61M 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5HIO _atom_sites.fract_transf_matrix[1][1] 0.01636 _atom_sites.fract_transf_matrix[1][2] 0.009446 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018891 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00685 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 401 998 FE FE . C 2 FE A 1 402 999 FE FE . D 3 61M A 1 403 1 61M LIG . E 4 HOH A 1 501 169 HOH HOH . E 4 HOH A 2 502 107 HOH HOH . E 4 HOH A 3 503 160 HOH HOH . E 4 HOH A 4 504 129 HOH HOH . E 4 HOH A 5 505 176 HOH HOH . E 4 HOH A 6 506 148 HOH HOH . E 4 HOH A 7 507 134 HOH HOH . E 4 HOH A 8 508 25 HOH HOH . E 4 HOH A 9 509 182 HOH HOH . E 4 HOH A 10 510 187 HOH HOH . E 4 HOH A 11 511 101 HOH HOH . E 4 HOH A 12 512 55 HOH HOH . E 4 HOH A 13 513 149 HOH HOH . E 4 HOH A 14 514 58 HOH HOH . E 4 HOH A 15 515 119 HOH HOH . E 4 HOH A 16 516 180 HOH HOH . E 4 HOH A 17 517 171 HOH HOH . E 4 HOH A 18 518 108 HOH HOH . E 4 HOH A 19 519 131 HOH HOH . E 4 HOH A 20 520 177 HOH HOH . E 4 HOH A 21 521 159 HOH HOH . E 4 HOH A 22 522 18 HOH HOH . E 4 HOH A 23 523 68 HOH HOH . E 4 HOH A 24 524 10 HOH HOH . E 4 HOH A 25 525 168 HOH HOH . E 4 HOH A 26 526 95 HOH HOH . E 4 HOH A 27 527 76 HOH HOH . E 4 HOH A 28 528 23 HOH HOH . E 4 HOH A 29 529 173 HOH HOH . E 4 HOH A 30 530 13 HOH HOH . E 4 HOH A 31 531 69 HOH HOH . E 4 HOH A 32 532 34 HOH HOH . E 4 HOH A 33 533 42 HOH HOH . E 4 HOH A 34 534 97 HOH HOH . E 4 HOH A 35 535 170 HOH HOH . E 4 HOH A 36 536 41 HOH HOH . E 4 HOH A 37 537 75 HOH HOH . E 4 HOH A 38 538 40 HOH HOH . E 4 HOH A 39 539 166 HOH HOH . E 4 HOH A 40 540 175 HOH HOH . E 4 HOH A 41 541 12 HOH HOH . E 4 HOH A 42 542 64 HOH HOH . E 4 HOH A 43 543 178 HOH HOH . E 4 HOH A 44 544 152 HOH HOH . E 4 HOH A 45 545 85 HOH HOH . E 4 HOH A 46 546 163 HOH HOH . E 4 HOH A 47 547 82 HOH HOH . E 4 HOH A 48 548 94 HOH HOH . E 4 HOH A 49 549 63 HOH HOH . E 4 HOH A 50 550 20 HOH HOH . E 4 HOH A 51 551 124 HOH HOH . E 4 HOH A 52 552 120 HOH HOH . E 4 HOH A 53 553 70 HOH HOH . E 4 HOH A 54 554 89 HOH HOH . E 4 HOH A 55 555 6 HOH HOH . E 4 HOH A 56 556 33 HOH HOH . E 4 HOH A 57 557 113 HOH HOH . E 4 HOH A 58 558 143 HOH HOH . E 4 HOH A 59 559 46 HOH HOH . E 4 HOH A 60 560 83 HOH HOH . E 4 HOH A 61 561 27 HOH HOH . E 4 HOH A 62 562 86 HOH HOH . E 4 HOH A 63 563 19 HOH HOH . E 4 HOH A 64 564 123 HOH HOH . E 4 HOH A 65 565 7 HOH HOH . E 4 HOH A 66 566 105 HOH HOH . E 4 HOH A 67 567 72 HOH HOH . E 4 HOH A 68 568 136 HOH HOH . E 4 HOH A 69 569 36 HOH HOH . E 4 HOH A 70 570 59 HOH HOH . E 4 HOH A 71 571 9 HOH HOH . E 4 HOH A 72 572 8 HOH HOH . E 4 HOH A 73 573 122 HOH HOH . E 4 HOH A 74 574 52 HOH HOH . E 4 HOH A 75 575 138 HOH HOH . E 4 HOH A 76 576 161 HOH HOH . E 4 HOH A 77 577 157 HOH HOH . E 4 HOH A 78 578 37 HOH HOH . E 4 HOH A 79 579 146 HOH HOH . E 4 HOH A 80 580 130 HOH HOH . E 4 HOH A 81 581 39 HOH HOH . E 4 HOH A 82 582 191 HOH HOH . E 4 HOH A 83 583 4 HOH HOH . E 4 HOH A 84 584 1 HOH HOH . E 4 HOH A 85 585 118 HOH HOH . E 4 HOH A 86 586 126 HOH HOH . E 4 HOH A 87 587 125 HOH HOH . E 4 HOH A 88 588 2 HOH HOH . E 4 HOH A 89 589 26 HOH HOH . E 4 HOH A 90 590 84 HOH HOH . E 4 HOH A 91 591 28 HOH HOH . E 4 HOH A 92 592 47 HOH HOH . E 4 HOH A 93 593 24 HOH HOH . E 4 HOH A 94 594 17 HOH HOH . E 4 HOH A 95 595 43 HOH HOH . E 4 HOH A 96 596 48 HOH HOH . E 4 HOH A 97 597 132 HOH HOH . E 4 HOH A 98 598 29 HOH HOH . E 4 HOH A 99 599 91 HOH HOH . E 4 HOH A 100 600 102 HOH HOH . E 4 HOH A 101 601 35 HOH HOH . E 4 HOH A 102 602 32 HOH HOH . E 4 HOH A 103 603 5 HOH HOH . E 4 HOH A 104 604 183 HOH HOH . E 4 HOH A 105 605 137 HOH HOH . E 4 HOH A 106 606 71 HOH HOH . E 4 HOH A 107 607 16 HOH HOH . E 4 HOH A 108 608 15 HOH HOH . E 4 HOH A 109 609 99 HOH HOH . E 4 HOH A 110 610 114 HOH HOH . E 4 HOH A 111 611 49 HOH HOH . E 4 HOH A 112 612 62 HOH HOH . E 4 HOH A 113 613 87 HOH HOH . E 4 HOH A 114 614 103 HOH HOH . E 4 HOH A 115 615 110 HOH HOH . E 4 HOH A 116 616 115 HOH HOH . E 4 HOH A 117 617 90 HOH HOH . E 4 HOH A 118 618 88 HOH HOH . E 4 HOH A 119 619 133 HOH HOH . E 4 HOH A 120 620 73 HOH HOH . E 4 HOH A 121 621 60 HOH HOH . E 4 HOH A 122 622 106 HOH HOH . E 4 HOH A 123 623 44 HOH HOH . E 4 HOH A 124 624 66 HOH HOH . E 4 HOH A 125 625 92 HOH HOH . E 4 HOH A 126 626 111 HOH HOH . E 4 HOH A 127 627 22 HOH HOH . E 4 HOH A 128 628 128 HOH HOH . E 4 HOH A 129 629 11 HOH HOH . E 4 HOH A 130 630 184 HOH HOH . E 4 HOH A 131 631 30 HOH HOH . E 4 HOH A 132 632 61 HOH HOH . E 4 HOH A 133 633 165 HOH HOH . E 4 HOH A 134 634 74 HOH HOH . E 4 HOH A 135 635 14 HOH HOH . E 4 HOH A 136 636 51 HOH HOH . E 4 HOH A 137 637 96 HOH HOH . E 4 HOH A 138 638 121 HOH HOH . E 4 HOH A 139 639 167 HOH HOH . E 4 HOH A 140 640 78 HOH HOH . E 4 HOH A 141 641 190 HOH HOH . E 4 HOH A 142 642 50 HOH HOH . E 4 HOH A 143 643 38 HOH HOH . E 4 HOH A 144 644 104 HOH HOH . E 4 HOH A 145 645 31 HOH HOH . E 4 HOH A 146 646 21 HOH HOH . E 4 HOH A 147 647 151 HOH HOH . E 4 HOH A 148 648 57 HOH HOH . E 4 HOH A 149 649 79 HOH HOH . E 4 HOH A 150 650 3 HOH HOH . E 4 HOH A 151 651 93 HOH HOH . E 4 HOH A 152 652 156 HOH HOH . E 4 HOH A 153 653 127 HOH HOH . E 4 HOH A 154 654 112 HOH HOH . E 4 HOH A 155 655 109 HOH HOH . E 4 HOH A 156 656 147 HOH HOH . E 4 HOH A 157 657 80 HOH HOH . E 4 HOH A 158 658 188 HOH HOH . E 4 HOH A 159 659 179 HOH HOH . E 4 HOH A 160 660 142 HOH HOH . E 4 HOH A 161 661 53 HOH HOH . E 4 HOH A 162 662 135 HOH HOH . E 4 HOH A 163 663 45 HOH HOH . E 4 HOH A 164 664 98 HOH HOH . E 4 HOH A 165 665 186 HOH HOH . E 4 HOH A 166 666 81 HOH HOH . E 4 HOH A 167 667 56 HOH HOH . E 4 HOH A 168 668 172 HOH HOH . E 4 HOH A 169 669 139 HOH HOH . E 4 HOH A 170 670 194 HOH HOH . E 4 HOH A 171 671 181 HOH HOH . E 4 HOH A 172 672 174 HOH HOH . E 4 HOH A 173 673 150 HOH HOH . E 4 HOH A 174 674 117 HOH HOH . E 4 HOH A 175 675 154 HOH HOH . E 4 HOH A 176 676 189 HOH HOH . E 4 HOH A 177 677 192 HOH HOH . E 4 HOH A 178 678 54 HOH HOH . E 4 HOH A 179 679 100 HOH HOH . E 4 HOH A 180 680 195 HOH HOH . E 4 HOH A 181 681 140 HOH HOH . E 4 HOH A 182 682 141 HOH HOH . E 4 HOH A 183 683 67 HOH HOH . E 4 HOH A 184 684 153 HOH HOH . E 4 HOH A 185 685 65 HOH HOH . E 4 HOH A 186 686 193 HOH HOH . E 4 HOH A 187 687 145 HOH HOH . E 4 HOH A 188 688 116 HOH HOH . E 4 HOH A 189 689 164 HOH HOH . E 4 HOH A 190 690 77 HOH HOH . E 4 HOH A 191 691 155 HOH HOH . E 4 HOH A 192 692 185 HOH HOH . E 4 HOH A 193 693 158 HOH HOH . E 4 HOH A 194 694 162 HOH HOH . E 4 HOH A 195 695 144 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -17.797 _atom_site.Cartn_y -2.374 _atom_site.Cartn_z -9.215 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #