data_5HJP # _model_server_result.job_id XGVIQ2xqUJZgZHTRxG520g _model_server_result.datetime_utc '2024-12-27 08:25:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hjp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":501}' # _entry.id 5HJP # _exptl.entry_id 5HJP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 518.012 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2-chloro-4-{1'-[(2R)-2-hydroxy-3-methyl-2-(trifluoromethyl)butanoyl]-4,4'-bipiperidin-1-yl}-N,N-dimethylbenzamide" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HJP _cell.length_a 66.77 _cell.length_b 106.028 _cell.length_c 139.818 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HJP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # _chem_comp.formula 'C25 H35 Cl F3 N3 O3' _chem_comp.formula_weight 518.012 _chem_comp.id 668 _chem_comp.mon_nstd_flag . _chem_comp.name "2-chloro-4-{1'-[(2R)-2-hydroxy-3-methyl-2-(trifluoromethyl)butanoyl]-4,4'-bipiperidin-1-yl}-N,N-dimethylbenzamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C3 668 sing 1 n n F C24 668 sing 2 n n F2 C24 668 sing 3 n n C24 C3 668 sing 4 n n C24 F1 668 sing 5 n n O1 C4 668 doub 6 n n C3 C4 668 sing 7 n n C3 C1 668 sing 8 n n C4 N 668 sing 9 n n C2 C1 668 sing 10 n n C1 C 668 sing 11 n n N C9 668 sing 12 n n N C5 668 sing 13 n n C9 C8 668 sing 14 n n C5 C6 668 sing 15 n n C8 C7 668 sing 16 n n C6 C7 668 sing 17 n n C7 C10 668 sing 18 n n C10 C11 668 sing 19 n n C10 C14 668 sing 20 n n C11 C12 668 sing 21 n n C14 C13 668 sing 22 n n C12 N1 668 sing 23 n n C13 N1 668 sing 24 n n N1 C15 668 sing 25 n n C15 C23 668 doub 26 n y C15 C16 668 sing 27 n y C23 C22 668 sing 28 n y C16 C17 668 doub 29 n y C22 CL 668 sing 30 n n C22 C18 668 doub 31 n y C17 C18 668 sing 32 n y C18 C19 668 sing 33 n n C20 N2 668 sing 34 n n C19 N2 668 sing 35 n n C19 O2 668 doub 36 n n N2 C21 668 sing 37 n n O H1 668 sing 38 n n C1 H2 668 sing 39 n n C2 H3 668 sing 40 n n C2 H4 668 sing 41 n n C2 H5 668 sing 42 n n C H6 668 sing 43 n n C H7 668 sing 44 n n C H8 668 sing 45 n n C9 H9 668 sing 46 n n C9 H10 668 sing 47 n n C8 H11 668 sing 48 n n C8 H12 668 sing 49 n n C7 H13 668 sing 50 n n C6 H14 668 sing 51 n n C6 H15 668 sing 52 n n C5 H16 668 sing 53 n n C5 H17 668 sing 54 n n C10 H18 668 sing 55 n n C14 H19 668 sing 56 n n C14 H20 668 sing 57 n n C13 H21 668 sing 58 n n C13 H22 668 sing 59 n n C12 H23 668 sing 60 n n C12 H24 668 sing 61 n n C11 H25 668 sing 62 n n C11 H26 668 sing 63 n n C23 H27 668 sing 64 n n C17 H28 668 sing 65 n n C16 H29 668 sing 66 n n C21 H30 668 sing 67 n n C21 H31 668 sing 68 n n C21 H32 668 sing 69 n n C20 H33 668 sing 70 n n C20 H34 668 sing 71 n n C20 H35 668 sing 72 n n # _atom_sites.entry_id 5HJP _atom_sites.fract_transf_matrix[1][1] 0.014977 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009431 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007152 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 668 B 1 501 2 668 668 . F 4 PEG B 1 502 1 PEG PEG . G 4 PEG C 1 601 2 PEG PEG . H 3 668 D 1 501 3 668 668 . I 5 HOH A 1 601 43 HOH HOH . I 5 HOH A 2 602 40 HOH HOH . I 5 HOH A 3 603 31 HOH HOH . I 5 HOH A 4 604 4 HOH HOH . J 5 HOH B 1 601 37 HOH HOH . J 5 HOH B 2 602 14 HOH HOH . J 5 HOH B 3 603 18 HOH HOH . J 5 HOH B 4 604 26 HOH HOH . J 5 HOH B 5 605 36 HOH HOH . J 5 HOH B 6 606 46 HOH HOH . J 5 HOH B 7 607 21 HOH HOH . J 5 HOH B 8 608 41 HOH HOH . J 5 HOH B 9 609 42 HOH HOH . J 5 HOH B 10 610 10 HOH HOH . J 5 HOH B 11 611 33 HOH HOH . J 5 HOH B 12 612 9 HOH HOH . J 5 HOH B 13 613 44 HOH HOH . J 5 HOH B 14 614 45 HOH HOH . J 5 HOH B 15 615 20 HOH HOH . K 5 HOH C 1 701 1 HOH HOH . K 5 HOH C 2 702 12 HOH HOH . K 5 HOH C 3 703 39 HOH HOH . K 5 HOH C 4 704 11 HOH HOH . K 5 HOH C 5 705 35 HOH HOH . K 5 HOH C 6 706 28 HOH HOH . K 5 HOH C 7 707 27 HOH HOH . K 5 HOH C 8 708 34 HOH HOH . K 5 HOH C 9 709 25 HOH HOH . K 5 HOH C 10 710 17 HOH HOH . K 5 HOH C 11 711 32 HOH HOH . L 5 HOH D 1 601 3 HOH HOH . L 5 HOH D 2 602 29 HOH HOH . L 5 HOH D 3 603 15 HOH HOH . L 5 HOH D 4 604 23 HOH HOH . L 5 HOH D 5 605 19 HOH HOH . L 5 HOH D 6 606 24 HOH HOH . L 5 HOH D 7 607 7 HOH HOH . L 5 HOH D 8 608 8 HOH HOH . L 5 HOH D 9 609 6 HOH HOH . L 5 HOH D 10 610 38 HOH HOH . L 5 HOH D 11 611 13 HOH HOH . L 5 HOH D 12 612 22 HOH HOH . L 5 HOH D 13 613 5 HOH HOH . L 5 HOH D 14 614 2 HOH HOH . L 5 HOH D 15 615 16 HOH HOH . L 5 HOH D 16 616 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F2 668 . . . H 3 -4.881 13.247 50.089 1 52.33 ? F2 668 501 D 1 HETATM 2 C C24 668 . . . H 3 -6.188 13.238 49.819 1 53.18 ? C24 668 501 D 1 HETATM 3 F F 668 . . . H 3 -6.318 13.411 48.508 1 55.71 ? F 668 501 D 1 HETATM 4 F F1 668 . . . H 3 -6.705 14.321 50.39 1 52.13 ? F1 668 501 D 1 HETATM 5 C C3 668 . . . H 3 -6.874 11.948 50.293 1 53.21 ? C3 668 501 D 1 HETATM 6 O O 668 . . . H 3 -7.152 11.236 49.089 1 54.93 ? O 668 501 D 1 HETATM 7 C C1 668 . . . H 3 -6.056 10.985 51.2 1 53.09 ? C1 668 501 D 1 HETATM 8 C C2 668 . . . H 3 -4.856 10.373 50.465 1 53.11 ? C2 668 501 D 1 HETATM 9 C C 668 . . . H 3 -6.914 9.861 51.764 1 52.2 ? C 668 501 D 1 HETATM 10 C C4 668 . . . H 3 -8.215 12.432 50.876 1 49.31 ? C4 668 501 D 1 HETATM 11 O O1 668 . . . H 3 -9.106 12.298 50.06 1 49.3 ? O1 668 501 D 1 HETATM 12 N N 668 . . . H 3 -8.472 12.963 52.089 1 46.27 ? N 668 501 D 1 HETATM 13 C C9 668 . . . H 3 -9.861 13.32 52.369 1 44.14 ? C9 668 501 D 1 HETATM 14 C C8 668 . . . H 3 -10.41 12.463 53.491 1 41.71 ? C8 668 501 D 1 HETATM 15 C C7 668 . . . H 3 -9.583 12.604 54.772 1 41.22 ? C7 668 501 D 1 HETATM 16 C C6 668 . . . H 3 -8.084 12.449 54.469 1 42.57 ? C6 668 501 D 1 HETATM 17 C C5 668 . . . H 3 -7.642 13.269 53.261 1 44.44 ? C5 668 501 D 1 HETATM 18 C C10 668 . . . H 3 -10.086 11.594 55.919 1 40.28 ? C10 668 501 D 1 HETATM 19 C C14 668 . . . H 3 -9.077 11.424 57.055 1 39.03 ? C14 668 501 D 1 HETATM 20 C C13 668 . . . H 3 -9.544 10.3 57.97 1 40.41 ? C13 668 501 D 1 HETATM 21 N N1 668 . . . H 3 -10.93 10.65 58.468 1 42.03 1 N1 668 501 D 1 HETATM 22 C C12 668 . . . H 3 -11.963 10.842 57.381 1 42.54 ? C12 668 501 D 1 HETATM 23 C C11 668 . . . H 3 -11.461 11.971 56.48 1 41.51 ? C11 668 501 D 1 HETATM 24 C C15 668 . . . H 3 -11.464 9.935 59.648 1 43.38 ? C15 668 501 D 1 HETATM 25 C C23 668 . . . H 3 -10.803 8.813 60.103 1 47.73 ? C23 668 501 D 1 HETATM 26 C C22 668 . . . H 3 -11.169 8.261 61.314 1 50.87 ? C22 668 501 D 1 HETATM 27 CL CL 668 . . . H 3 -10.343 6.821 61.807 1 62.19 ? CL 668 501 D 1 HETATM 28 C C18 668 . . . H 3 -12.191 8.812 62.089 1 42.46 ? C18 668 501 D 1 HETATM 29 C C17 668 . . . H 3 -12.869 9.925 61.582 1 39.42 ? C17 668 501 D 1 HETATM 30 C C16 668 . . . H 3 -12.52 10.482 60.364 1 40.9 ? C16 668 501 D 1 HETATM 31 C C19 668 . . . H 3 -12.572 8.264 63.442 1 38.49 ? C19 668 501 D 1 HETATM 32 O O2 668 . . . H 3 -12.14 8.823 64.442 1 37.3 ? O2 668 501 D 1 HETATM 33 N N2 668 . . . H 3 -13.379 7.19 63.501 1 32.21 ? N2 668 501 D 1 HETATM 34 C C21 668 . . . H 3 -13.827 6.634 64.775 1 26.96 ? C21 668 501 D 1 HETATM 35 C C20 668 . . . H 3 -13.903 6.485 62.324 1 31.99 ? C20 668 501 D 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #