data_5HL6
#
_model_server_result.job_id            stVdsYFYxKttRf2rOWk8OQ 
_model_server_result.datetime_utc      '2024-11-09 02:50:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5hl6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    5HL6 
#
_exptl.entry_id    5HL6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5HL6 
_cell.length_a            44.46 
_cell.length_b            70.2 
_cell.length_c            103.07 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5HL6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 83 A CYS 75 1_555 A SG CYS 117 A CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 B SG CYS 83 B CYS 75 1_555 B SG CYS 117 B CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     5HL6 
_atom_sites.fract_transf_matrix[1][1]    0.022492 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014245 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009702 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO B 1 201 1 EDO EDO . 
D 2 EDO B 1 202 2 EDO EDO . 
E 2 EDO B 1 203 3 EDO EDO . 
F 3 HOH A 1 201 63 HOH HOH . 
F 3 HOH A 2 202 76 HOH HOH . 
F 3 HOH A 3 203 56 HOH HOH . 
F 3 HOH A 4 204 15 HOH HOH . 
F 3 HOH A 5 205 108 HOH HOH . 
F 3 HOH A 6 206 17 HOH HOH . 
F 3 HOH A 7 207 131 HOH HOH . 
F 3 HOH A 8 208 23 HOH HOH . 
F 3 HOH A 9 209 152 HOH HOH . 
F 3 HOH A 10 210 115 HOH HOH . 
F 3 HOH A 11 211 156 HOH HOH . 
F 3 HOH A 12 212 27 HOH HOH . 
F 3 HOH A 13 213 8 HOH HOH . 
F 3 HOH A 14 214 51 HOH HOH . 
F 3 HOH A 15 215 153 HOH HOH . 
F 3 HOH A 16 216 104 HOH HOH . 
F 3 HOH A 17 217 120 HOH HOH . 
F 3 HOH A 18 218 133 HOH HOH . 
F 3 HOH A 19 219 92 HOH HOH . 
F 3 HOH A 20 220 106 HOH HOH . 
F 3 HOH A 21 221 176 HOH HOH . 
F 3 HOH A 22 222 40 HOH HOH . 
F 3 HOH A 23 223 79 HOH HOH . 
F 3 HOH A 24 224 6 HOH HOH . 
F 3 HOH A 25 225 13 HOH HOH . 
F 3 HOH A 26 226 136 HOH HOH . 
F 3 HOH A 27 227 90 HOH HOH . 
F 3 HOH A 28 228 157 HOH HOH . 
F 3 HOH A 29 229 36 HOH HOH . 
F 3 HOH A 30 230 116 HOH HOH . 
F 3 HOH A 31 231 103 HOH HOH . 
F 3 HOH A 32 232 39 HOH HOH . 
F 3 HOH A 33 233 65 HOH HOH . 
F 3 HOH A 34 234 178 HOH HOH . 
F 3 HOH A 35 235 54 HOH HOH . 
F 3 HOH A 36 236 21 HOH HOH . 
F 3 HOH A 37 237 88 HOH HOH . 
F 3 HOH A 38 238 171 HOH HOH . 
F 3 HOH A 39 239 1 HOH HOH . 
F 3 HOH A 40 240 94 HOH HOH . 
F 3 HOH A 41 241 59 HOH HOH . 
F 3 HOH A 42 242 91 HOH HOH . 
F 3 HOH A 43 243 49 HOH HOH . 
F 3 HOH A 44 244 87 HOH HOH . 
F 3 HOH A 45 245 173 HOH HOH . 
F 3 HOH A 46 246 33 HOH HOH . 
F 3 HOH A 47 247 55 HOH HOH . 
F 3 HOH A 48 248 52 HOH HOH . 
F 3 HOH A 49 249 172 HOH HOH . 
F 3 HOH A 50 250 46 HOH HOH . 
F 3 HOH A 51 251 137 HOH HOH . 
F 3 HOH A 52 252 48 HOH HOH . 
F 3 HOH A 53 253 77 HOH HOH . 
F 3 HOH A 54 254 45 HOH HOH . 
F 3 HOH A 55 255 183 HOH HOH . 
F 3 HOH A 56 256 175 HOH HOH . 
F 3 HOH A 57 257 67 HOH HOH . 
F 3 HOH A 58 258 101 HOH HOH . 
F 3 HOH A 59 259 155 HOH HOH . 
F 3 HOH A 60 260 140 HOH HOH . 
F 3 HOH A 61 261 148 HOH HOH . 
F 3 HOH A 62 262 7 HOH HOH . 
F 3 HOH A 63 263 38 HOH HOH . 
F 3 HOH A 64 264 42 HOH HOH . 
F 3 HOH A 65 265 117 HOH HOH . 
F 3 HOH A 66 266 174 HOH HOH . 
F 3 HOH A 67 267 132 HOH HOH . 
F 3 HOH A 68 268 50 HOH HOH . 
F 3 HOH A 69 269 43 HOH HOH . 
F 3 HOH A 70 270 154 HOH HOH . 
F 3 HOH A 71 271 118 HOH HOH . 
F 3 HOH A 72 272 125 HOH HOH . 
F 3 HOH A 73 273 58 HOH HOH . 
F 3 HOH A 74 274 149 HOH HOH . 
F 3 HOH A 75 275 31 HOH HOH . 
F 3 HOH A 76 276 30 HOH HOH . 
F 3 HOH A 77 277 134 HOH HOH . 
F 3 HOH A 78 278 135 HOH HOH . 
F 3 HOH A 79 279 60 HOH HOH . 
F 3 HOH A 80 280 28 HOH HOH . 
F 3 HOH A 81 281 123 HOH HOH . 
F 3 HOH A 82 282 96 HOH HOH . 
F 3 HOH A 83 283 177 HOH HOH . 
F 3 HOH A 84 284 93 HOH HOH . 
F 3 HOH A 85 285 158 HOH HOH . 
F 3 HOH A 86 286 105 HOH HOH . 
F 3 HOH A 87 287 80 HOH HOH . 
F 3 HOH A 88 288 187 HOH HOH . 
G 3 HOH B 1 301 74 HOH HOH . 
G 3 HOH B 2 302 75 HOH HOH . 
G 3 HOH B 3 303 35 HOH HOH . 
G 3 HOH B 4 304 81 HOH HOH . 
G 3 HOH B 5 305 119 HOH HOH . 
G 3 HOH B 6 306 72 HOH HOH . 
G 3 HOH B 7 307 84 HOH HOH . 
G 3 HOH B 8 308 170 HOH HOH . 
G 3 HOH B 9 309 25 HOH HOH . 
G 3 HOH B 10 310 71 HOH HOH . 
G 3 HOH B 11 311 145 HOH HOH . 
G 3 HOH B 12 312 20 HOH HOH . 
G 3 HOH B 13 313 9 HOH HOH . 
G 3 HOH B 14 314 144 HOH HOH . 
G 3 HOH B 15 315 89 HOH HOH . 
G 3 HOH B 16 316 128 HOH HOH . 
G 3 HOH B 17 317 78 HOH HOH . 
G 3 HOH B 18 318 68 HOH HOH . 
G 3 HOH B 19 319 95 HOH HOH . 
G 3 HOH B 20 320 24 HOH HOH . 
G 3 HOH B 21 321 141 HOH HOH . 
G 3 HOH B 22 322 73 HOH HOH . 
G 3 HOH B 23 323 69 HOH HOH . 
G 3 HOH B 24 324 130 HOH HOH . 
G 3 HOH B 25 325 12 HOH HOH . 
G 3 HOH B 26 326 4 HOH HOH . 
G 3 HOH B 27 327 159 HOH HOH . 
G 3 HOH B 28 328 62 HOH HOH . 
G 3 HOH B 29 329 34 HOH HOH . 
G 3 HOH B 30 330 147 HOH HOH . 
G 3 HOH B 31 331 139 HOH HOH . 
G 3 HOH B 32 332 44 HOH HOH . 
G 3 HOH B 33 333 113 HOH HOH . 
G 3 HOH B 34 334 161 HOH HOH . 
G 3 HOH B 35 335 22 HOH HOH . 
G 3 HOH B 36 336 165 HOH HOH . 
G 3 HOH B 37 337 18 HOH HOH . 
G 3 HOH B 38 338 179 HOH HOH . 
G 3 HOH B 39 339 82 HOH HOH . 
G 3 HOH B 40 340 10 HOH HOH . 
G 3 HOH B 41 341 109 HOH HOH . 
G 3 HOH B 42 342 64 HOH HOH . 
G 3 HOH B 43 343 107 HOH HOH . 
G 3 HOH B 44 344 41 HOH HOH . 
G 3 HOH B 45 345 29 HOH HOH . 
G 3 HOH B 46 346 70 HOH HOH . 
G 3 HOH B 47 347 85 HOH HOH . 
G 3 HOH B 48 348 182 HOH HOH . 
G 3 HOH B 49 349 181 HOH HOH . 
G 3 HOH B 50 350 16 HOH HOH . 
G 3 HOH B 51 351 112 HOH HOH . 
G 3 HOH B 52 352 121 HOH HOH . 
G 3 HOH B 53 353 142 HOH HOH . 
G 3 HOH B 54 354 37 HOH HOH . 
G 3 HOH B 55 355 99 HOH HOH . 
G 3 HOH B 56 356 98 HOH HOH . 
G 3 HOH B 57 357 11 HOH HOH . 
G 3 HOH B 58 358 126 HOH HOH . 
G 3 HOH B 59 359 186 HOH HOH . 
G 3 HOH B 60 360 2 HOH HOH . 
G 3 HOH B 61 361 32 HOH HOH . 
G 3 HOH B 62 362 86 HOH HOH . 
G 3 HOH B 63 363 122 HOH HOH . 
G 3 HOH B 64 364 160 HOH HOH . 
G 3 HOH B 65 365 5 HOH HOH . 
G 3 HOH B 66 366 19 HOH HOH . 
G 3 HOH B 67 367 61 HOH HOH . 
G 3 HOH B 68 368 188 HOH HOH . 
G 3 HOH B 69 369 163 HOH HOH . 
G 3 HOH B 70 370 66 HOH HOH . 
G 3 HOH B 71 371 47 HOH HOH . 
G 3 HOH B 72 372 26 HOH HOH . 
G 3 HOH B 73 373 124 HOH HOH . 
G 3 HOH B 74 374 180 HOH HOH . 
G 3 HOH B 75 375 167 HOH HOH . 
G 3 HOH B 76 376 162 HOH HOH . 
G 3 HOH B 77 377 97 HOH HOH . 
G 3 HOH B 78 378 3 HOH HOH . 
G 3 HOH B 79 379 138 HOH HOH . 
G 3 HOH B 80 380 168 HOH HOH . 
G 3 HOH B 81 381 114 HOH HOH . 
G 3 HOH B 82 382 151 HOH HOH . 
G 3 HOH B 83 383 57 HOH HOH . 
G 3 HOH B 84 384 164 HOH HOH . 
G 3 HOH B 85 385 111 HOH HOH . 
G 3 HOH B 86 386 150 HOH HOH . 
G 3 HOH B 87 387 83 HOH HOH . 
G 3 HOH B 88 388 127 HOH HOH . 
G 3 HOH B 89 389 53 HOH HOH . 
G 3 HOH B 90 390 185 HOH HOH . 
G 3 HOH B 91 391 184 HOH HOH . 
G 3 HOH B 92 392 102 HOH HOH . 
G 3 HOH B 93 393 100 HOH HOH . 
G 3 HOH B 94 394 146 HOH HOH . 
G 3 HOH B 95 395 169 HOH HOH . 
G 3 HOH B 96 396 110 HOH HOH . 
G 3 HOH B 97 397 14 HOH HOH . 
G 3 HOH B 98 398 143 HOH HOH . 
G 3 HOH B 99 399 166 HOH HOH . 
G 3 HOH B 100 400 129 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 2 4.094 19.414 138.379 1 51.09 ? C1 EDO 201 B 1 
HETATM 2 O O1 EDO . . . C 2 3.14 19.807 139.378 1 51.71 ? O1 EDO 201 B 1 
HETATM 3 C C2 EDO . . . C 2 3.471 18.394 137.43 1 46.31 ? C2 EDO 201 B 1 
HETATM 4 O O2 EDO . . . C 2 2.956 17.296 138.196 1 52.08 ? O2 EDO 201 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#