data_5HLX # _model_server_result.job_id FXwE1uEPUHQeoYAalJt8tQ _model_server_result.datetime_utc '2024-12-01 05:44:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hlx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 5HLX # _exptl.entry_id 5HLX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.005 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRITE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HLX _cell.length_a 39.701 _cell.length_b 49.545 _cell.length_c 77.588 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HLX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc2 B FE HEM . A HEM 201 1_555 E O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? # _chem_comp.formula 'N O2 -1' _chem_comp.formula_weight 46.005 _chem_comp.id NO2 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRITE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO2 doub 306 n n N O2 NO2 sing 307 n n # _atom_sites.entry_id 5HLX _atom_sites.fract_transf_matrix[1][1] 0.025188 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020184 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012889 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 1 HEM HEM . C 3 NO2 A 1 202 1 NO2 NO2 . D 3 NO2 A 1 203 2 NO2 NO2 . E 4 HOH A 1 301 236 HOH HOH . E 4 HOH A 2 302 226 HOH HOH . E 4 HOH A 3 303 240 HOH HOH . E 4 HOH A 4 304 223 HOH HOH . E 4 HOH A 5 305 231 HOH HOH . E 4 HOH A 6 306 171 HOH HOH . E 4 HOH A 7 307 1 HOH HOH . E 4 HOH A 8 308 179 HOH HOH . E 4 HOH A 9 309 130 HOH HOH . E 4 HOH A 10 310 196 HOH HOH . E 4 HOH A 11 311 118 HOH HOH . E 4 HOH A 12 312 225 HOH HOH . E 4 HOH A 13 313 128 HOH HOH . E 4 HOH A 14 314 220 HOH HOH . E 4 HOH A 15 315 237 HOH HOH . E 4 HOH A 16 316 125 HOH HOH . E 4 HOH A 17 317 123 HOH HOH . E 4 HOH A 18 318 243 HOH HOH . E 4 HOH A 19 319 47 HOH HOH . E 4 HOH A 20 320 184 HOH HOH . E 4 HOH A 21 321 273 HOH HOH . E 4 HOH A 22 322 173 HOH HOH . E 4 HOH A 23 323 283 HOH HOH . E 4 HOH A 24 324 172 HOH HOH . E 4 HOH A 25 325 29 HOH HOH . E 4 HOH A 26 326 262 HOH HOH . E 4 HOH A 27 327 168 HOH HOH . E 4 HOH A 28 328 121 HOH HOH . E 4 HOH A 29 329 277 HOH HOH . E 4 HOH A 30 330 21 HOH HOH . E 4 HOH A 31 331 14 HOH HOH . E 4 HOH A 32 332 73 HOH HOH . E 4 HOH A 33 333 46 HOH HOH . E 4 HOH A 34 334 16 HOH HOH . E 4 HOH A 35 335 91 HOH HOH . E 4 HOH A 36 336 242 HOH HOH . E 4 HOH A 37 337 106 HOH HOH . E 4 HOH A 38 338 59 HOH HOH . E 4 HOH A 39 339 32 HOH HOH . E 4 HOH A 40 340 274 HOH HOH . E 4 HOH A 41 341 15 HOH HOH . E 4 HOH A 42 342 24 HOH HOH . E 4 HOH A 43 343 190 HOH HOH . E 4 HOH A 44 344 55 HOH HOH . E 4 HOH A 45 345 115 HOH HOH . E 4 HOH A 46 346 131 HOH HOH . E 4 HOH A 47 347 66 HOH HOH . E 4 HOH A 48 348 50 HOH HOH . E 4 HOH A 49 349 38 HOH HOH . E 4 HOH A 50 350 259 HOH HOH . E 4 HOH A 51 351 60 HOH HOH . E 4 HOH A 52 352 215 HOH HOH . E 4 HOH A 53 353 122 HOH HOH . E 4 HOH A 54 354 56 HOH HOH . E 4 HOH A 55 355 9 HOH HOH . E 4 HOH A 56 356 140 HOH HOH . E 4 HOH A 57 357 17 HOH HOH . E 4 HOH A 58 358 260 HOH HOH . E 4 HOH A 59 359 49 HOH HOH . E 4 HOH A 60 360 75 HOH HOH . E 4 HOH A 61 361 177 HOH HOH . E 4 HOH A 62 362 214 HOH HOH . E 4 HOH A 63 363 285 HOH HOH . E 4 HOH A 64 364 2 HOH HOH . E 4 HOH A 65 365 82 HOH HOH . E 4 HOH A 66 366 57 HOH HOH . E 4 HOH A 67 367 149 HOH HOH . E 4 HOH A 68 368 160 HOH HOH . E 4 HOH A 69 369 181 HOH HOH . E 4 HOH A 70 370 35 HOH HOH . E 4 HOH A 71 371 80 HOH HOH . E 4 HOH A 72 372 40 HOH HOH . E 4 HOH A 73 373 234 HOH HOH . E 4 HOH A 74 374 30 HOH HOH . E 4 HOH A 75 375 100 HOH HOH . E 4 HOH A 76 376 156 HOH HOH . E 4 HOH A 77 377 111 HOH HOH . E 4 HOH A 78 378 39 HOH HOH . E 4 HOH A 79 379 85 HOH HOH . E 4 HOH A 80 380 199 HOH HOH . E 4 HOH A 81 381 10 HOH HOH . E 4 HOH A 82 382 34 HOH HOH . E 4 HOH A 83 383 205 HOH HOH . E 4 HOH A 84 384 152 HOH HOH . E 4 HOH A 85 385 62 HOH HOH . E 4 HOH A 86 386 180 HOH HOH . E 4 HOH A 87 387 213 HOH HOH . E 4 HOH A 88 388 112 HOH HOH . E 4 HOH A 89 389 78 HOH HOH . E 4 HOH A 90 390 227 HOH HOH . E 4 HOH A 91 391 127 HOH HOH . E 4 HOH A 92 392 26 HOH HOH . E 4 HOH A 93 393 275 HOH HOH . E 4 HOH A 94 394 12 HOH HOH . E 4 HOH A 95 395 64 HOH HOH . E 4 HOH A 96 396 20 HOH HOH . E 4 HOH A 97 397 23 HOH HOH . E 4 HOH A 98 398 5 HOH HOH . E 4 HOH A 99 399 3 HOH HOH . E 4 HOH A 100 400 41 HOH HOH . E 4 HOH A 101 401 161 HOH HOH . E 4 HOH A 102 402 101 HOH HOH . E 4 HOH A 103 403 84 HOH HOH . E 4 HOH A 104 404 11 HOH HOH . E 4 HOH A 105 405 200 HOH HOH . E 4 HOH A 106 406 61 HOH HOH . E 4 HOH A 107 407 79 HOH HOH . E 4 HOH A 108 408 165 HOH HOH . E 4 HOH A 109 409 96 HOH HOH . E 4 HOH A 110 410 221 HOH HOH . E 4 HOH A 111 411 6 HOH HOH . E 4 HOH A 112 412 52 HOH HOH . E 4 HOH A 113 413 146 HOH HOH . E 4 HOH A 114 414 48 HOH HOH . E 4 HOH A 115 415 155 HOH HOH . E 4 HOH A 116 416 93 HOH HOH . E 4 HOH A 117 417 134 HOH HOH . E 4 HOH A 118 418 70 HOH HOH . E 4 HOH A 119 419 99 HOH HOH . E 4 HOH A 120 420 69 HOH HOH . E 4 HOH A 121 421 44 HOH HOH . E 4 HOH A 122 422 45 HOH HOH . E 4 HOH A 123 423 164 HOH HOH . E 4 HOH A 124 424 58 HOH HOH . E 4 HOH A 125 425 88 HOH HOH . E 4 HOH A 126 426 74 HOH HOH . E 4 HOH A 127 427 267 HOH HOH . E 4 HOH A 128 428 31 HOH HOH . E 4 HOH A 129 429 159 HOH HOH . E 4 HOH A 130 430 67 HOH HOH . E 4 HOH A 131 431 187 HOH HOH . E 4 HOH A 132 432 166 HOH HOH . E 4 HOH A 133 433 202 HOH HOH . E 4 HOH A 134 434 22 HOH HOH . E 4 HOH A 135 435 235 HOH HOH . E 4 HOH A 136 436 248 HOH HOH . E 4 HOH A 137 437 72 HOH HOH . E 4 HOH A 138 438 4 HOH HOH . E 4 HOH A 139 439 129 HOH HOH . E 4 HOH A 140 440 167 HOH HOH . E 4 HOH A 141 441 104 HOH HOH . E 4 HOH A 142 442 163 HOH HOH . E 4 HOH A 143 443 8 HOH HOH . E 4 HOH A 144 444 51 HOH HOH . E 4 HOH A 145 445 68 HOH HOH . E 4 HOH A 146 446 19 HOH HOH . E 4 HOH A 147 447 266 HOH HOH . E 4 HOH A 148 448 120 HOH HOH . E 4 HOH A 149 449 43 HOH HOH . E 4 HOH A 150 450 113 HOH HOH . E 4 HOH A 151 451 92 HOH HOH . E 4 HOH A 152 452 87 HOH HOH . E 4 HOH A 153 453 151 HOH HOH . E 4 HOH A 154 454 144 HOH HOH . E 4 HOH A 155 455 7 HOH HOH . E 4 HOH A 156 456 176 HOH HOH . E 4 HOH A 157 457 102 HOH HOH . E 4 HOH A 158 458 133 HOH HOH . E 4 HOH A 159 459 89 HOH HOH . E 4 HOH A 160 460 117 HOH HOH . E 4 HOH A 161 461 27 HOH HOH . E 4 HOH A 162 462 233 HOH HOH . E 4 HOH A 163 463 211 HOH HOH . E 4 HOH A 164 464 25 HOH HOH . E 4 HOH A 165 465 175 HOH HOH . E 4 HOH A 166 466 77 HOH HOH . E 4 HOH A 167 467 13 HOH HOH . E 4 HOH A 168 468 178 HOH HOH . E 4 HOH A 169 469 83 HOH HOH . E 4 HOH A 170 470 157 HOH HOH . E 4 HOH A 171 471 65 HOH HOH . E 4 HOH A 172 472 284 HOH HOH . E 4 HOH A 173 473 153 HOH HOH . E 4 HOH A 174 474 28 HOH HOH . E 4 HOH A 175 475 145 HOH HOH . E 4 HOH A 176 476 110 HOH HOH . E 4 HOH A 177 477 54 HOH HOH . E 4 HOH A 178 478 230 HOH HOH . E 4 HOH A 179 479 241 HOH HOH . E 4 HOH A 180 480 136 HOH HOH . E 4 HOH A 181 481 224 HOH HOH . E 4 HOH A 182 482 142 HOH HOH . E 4 HOH A 183 483 119 HOH HOH . E 4 HOH A 184 484 81 HOH HOH . E 4 HOH A 185 485 276 HOH HOH . E 4 HOH A 186 486 210 HOH HOH . E 4 HOH A 187 487 192 HOH HOH . E 4 HOH A 188 488 229 HOH HOH . E 4 HOH A 189 489 206 HOH HOH . E 4 HOH A 190 490 148 HOH HOH . E 4 HOH A 191 491 97 HOH HOH . E 4 HOH A 192 492 86 HOH HOH . E 4 HOH A 193 493 256 HOH HOH . E 4 HOH A 194 494 189 HOH HOH . E 4 HOH A 195 495 174 HOH HOH . E 4 HOH A 196 496 251 HOH HOH . E 4 HOH A 197 497 95 HOH HOH . E 4 HOH A 198 498 247 HOH HOH . E 4 HOH A 199 499 193 HOH HOH . E 4 HOH A 200 500 98 HOH HOH . E 4 HOH A 201 501 94 HOH HOH . E 4 HOH A 202 502 182 HOH HOH . E 4 HOH A 203 503 124 HOH HOH . E 4 HOH A 204 504 261 HOH HOH . E 4 HOH A 205 505 207 HOH HOH . E 4 HOH A 206 506 33 HOH HOH . E 4 HOH A 207 507 218 HOH HOH . E 4 HOH A 208 508 239 HOH HOH . E 4 HOH A 209 509 278 HOH HOH . E 4 HOH A 210 510 107 HOH HOH . E 4 HOH A 211 511 209 HOH HOH . E 4 HOH A 212 512 150 HOH HOH . E 4 HOH A 213 513 270 HOH HOH . E 4 HOH A 214 514 90 HOH HOH . E 4 HOH A 215 515 269 HOH HOH . E 4 HOH A 216 516 254 HOH HOH . E 4 HOH A 217 517 63 HOH HOH . E 4 HOH A 218 518 219 HOH HOH . E 4 HOH A 219 519 71 HOH HOH . E 4 HOH A 220 520 137 HOH HOH . E 4 HOH A 221 521 185 HOH HOH . E 4 HOH A 222 522 105 HOH HOH . E 4 HOH A 223 523 114 HOH HOH . E 4 HOH A 224 524 116 HOH HOH . E 4 HOH A 225 525 265 HOH HOH . E 4 HOH A 226 526 141 HOH HOH . E 4 HOH A 227 527 232 HOH HOH . E 4 HOH A 228 528 36 HOH HOH . E 4 HOH A 229 529 143 HOH HOH . E 4 HOH A 230 530 222 HOH HOH . E 4 HOH A 231 531 244 HOH HOH . E 4 HOH A 232 532 249 HOH HOH . E 4 HOH A 233 533 250 HOH HOH . E 4 HOH A 234 534 201 HOH HOH . E 4 HOH A 235 535 212 HOH HOH . E 4 HOH A 236 536 186 HOH HOH . E 4 HOH A 237 537 188 HOH HOH . E 4 HOH A 238 538 194 HOH HOH . E 4 HOH A 239 539 191 HOH HOH . E 4 HOH A 240 540 263 HOH HOH . E 4 HOH A 241 541 108 HOH HOH . E 4 HOH A 242 542 198 HOH HOH . E 4 HOH A 243 543 18 HOH HOH . E 4 HOH A 244 544 281 HOH HOH . E 4 HOH A 245 545 183 HOH HOH . E 4 HOH A 246 546 272 HOH HOH . E 4 HOH A 247 547 195 HOH HOH . E 4 HOH A 248 548 280 HOH HOH . E 4 HOH A 249 549 268 HOH HOH . E 4 HOH A 250 550 258 HOH HOH . E 4 HOH A 251 551 126 HOH HOH . E 4 HOH A 252 552 53 HOH HOH . E 4 HOH A 253 553 279 HOH HOH . E 4 HOH A 254 554 170 HOH HOH . E 4 HOH A 255 555 154 HOH HOH . E 4 HOH A 256 556 147 HOH HOH . E 4 HOH A 257 557 37 HOH HOH . E 4 HOH A 258 558 252 HOH HOH . E 4 HOH A 259 559 257 HOH HOH . E 4 HOH A 260 560 238 HOH HOH . E 4 HOH A 261 561 139 HOH HOH . E 4 HOH A 262 562 138 HOH HOH . E 4 HOH A 263 563 286 HOH HOH . E 4 HOH A 264 564 158 HOH HOH . E 4 HOH A 265 565 208 HOH HOH . E 4 HOH A 266 566 253 HOH HOH . E 4 HOH A 267 567 204 HOH HOH . E 4 HOH A 268 568 216 HOH HOH . E 4 HOH A 269 569 217 HOH HOH . E 4 HOH A 270 570 271 HOH HOH . E 4 HOH A 271 571 42 HOH HOH . E 4 HOH A 272 572 169 HOH HOH . E 4 HOH A 273 573 103 HOH HOH . E 4 HOH A 274 574 76 HOH HOH . E 4 HOH A 275 575 162 HOH HOH . E 4 HOH A 276 576 109 HOH HOH . E 4 HOH A 277 577 132 HOH HOH . E 4 HOH A 278 578 135 HOH HOH . E 4 HOH A 279 579 255 HOH HOH . E 4 HOH A 280 580 282 HOH HOH . E 4 HOH A 281 581 246 HOH HOH . E 4 HOH A 282 582 197 HOH HOH . E 4 HOH A 283 583 228 HOH HOH . E 4 HOH A 284 584 203 HOH HOH . E 4 HOH A 285 585 245 HOH HOH . E 4 HOH A 286 586 264 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO2 . . . D 3 -13.212 -0.981 -6.317 1 27.97 ? N NO2 203 A 1 HETATM 2 O O1 NO2 . . . D 3 -14.323 -1.154 -5.702 1 26.49 ? O1 NO2 203 A 1 HETATM 3 O O2 NO2 . . . D 3 -12.966 -0.074 -7.385 1 26.13 ? O2 NO2 203 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 1212 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 3 #