data_5HMC # _model_server_result.job_id SwAh972gz8f-Yh08igH3SA _model_server_result.datetime_utc '2024-10-10 10:21:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hmc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 5HMC # _exptl.entry_id 5HMC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HMC _cell.length_a 67.771 _cell.length_b 67.771 _cell.length_c 140.278 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HMC _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 10_645 -x+1,-y-1,z -1 0 0 0 -1 0 0 0 1 67.771 -67.771 0 4 'crystal symmetry operation' 15_645 y+1,x-1,-z 0 1 0 1 0 0 0 0 -1 67.771 -67.771 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 315 n n S O2 SO4 doub 316 n n S O3 SO4 sing 317 n n S O4 SO4 sing 318 n n # _atom_sites.entry_id 5HMC _atom_sites.fract_transf_matrix[1][1] 0.014756 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014756 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007129 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5NE A 1 300 300 5NE 5NE . C 3 SO4 A 1 301 301 SO4 SO4 . D 3 SO4 A 1 302 302 SO4 SO4 . E 4 HOH A 1 401 16 HOH HOH . E 4 HOH A 2 402 10 HOH HOH . E 4 HOH A 3 403 19 HOH HOH . E 4 HOH A 4 404 2 HOH HOH . E 4 HOH A 5 405 1 HOH HOH . E 4 HOH A 6 406 20 HOH HOH . E 4 HOH A 7 407 18 HOH HOH . E 4 HOH A 8 408 29 HOH HOH . E 4 HOH A 9 409 12 HOH HOH . E 4 HOH A 10 410 30 HOH HOH . E 4 HOH A 11 411 7 HOH HOH . E 4 HOH A 12 412 6 HOH HOH . E 4 HOH A 13 413 9 HOH HOH . E 4 HOH A 14 414 8 HOH HOH . E 4 HOH A 15 415 5 HOH HOH . E 4 HOH A 16 416 4 HOH HOH . E 4 HOH A 17 417 15 HOH HOH . E 4 HOH A 18 418 22 HOH HOH . E 4 HOH A 19 419 3 HOH HOH . E 4 HOH A 20 420 13 HOH HOH . E 4 HOH A 21 421 17 HOH HOH . E 4 HOH A 22 422 11 HOH HOH . E 4 HOH A 23 423 28 HOH HOH . E 4 HOH A 24 424 27 HOH HOH . E 4 HOH A 25 425 24 HOH HOH . E 4 HOH A 26 426 26 HOH HOH . E 4 HOH A 27 427 21 HOH HOH . E 4 HOH A 28 428 25 HOH HOH . E 4 HOH A 29 429 23 HOH HOH . E 4 HOH A 30 430 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 40.978 -30.681 -17.382 1 59.62 ? S SO4 302 A 1 HETATM 2 O O1 SO4 . . . D 3 42.301 -30.127 -17.718 1 67.24 ? O1 SO4 302 A 1 HETATM 3 O O2 SO4 . . . D 3 40.204 -30.985 -18.586 1 54.52 ? O2 SO4 302 A 1 HETATM 4 O O3 SO4 . . . D 3 41.146 -31.881 -16.564 1 64.6 ? O3 SO4 302 A 1 HETATM 5 O O4 SO4 . . . D 3 40.22 -29.686 -16.628 1 53.42 ? O4 SO4 302 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 5 #