data_5HMH
#
_model_server_result.job_id            C_Rpdm4G0qNGboIPR2ZCrQ 
_model_server_result.datetime_utc      '2025-07-02 03:29:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5hmh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    5HMH 
#
_exptl.entry_id    5HMH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              756.755 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-[2-(4-{[(2R,3S)-2-propyl-1-{[4-(trifluoromethyl)pyridin-3-yl]carbonyl}-3-{[5-(trifluoromethyl)thiophen-3-yl]oxy}piperidin-3-yl]carbonyl}piperazin-1-yl)phenoxy]butanoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5HMH 
_cell.length_a            39.64 
_cell.length_b            39.127 
_cell.length_c            132.337 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5HMH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
A,B,C,D,E,F,G 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C35 H38 F6 N4 O6 S' 
_chem_comp.formula_weight    756.755 
_chem_comp.id                62R 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-[2-(4-{[(2R,3S)-2-propyl-1-{[4-(trifluoromethyl)pyridin-3-yl]carbonyl}-3-{[5-(trifluoromethyl)thiophen-3-yl]oxy}piperidin-3-yl]carbonyl}piperazin-1-yl)phenoxy]butanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N3 C21 62R doub 1 n y 
N3 C20 62R sing 2 n y 
C21 C22 62R sing 3 n y 
C20 C19 62R doub 4 n y 
C22 C23 62R doub 5 n y 
C27 C26 62R sing 6 n n 
C26 C25 62R sing 7 n n 
C19 C23 62R sing 8 n y 
C19 C18 62R sing 9 n n 
C23 C24 62R sing 10 n n 
C18 O4 62R doub 11 n n 
C18 N2 62R sing 12 n n 
C25 C14 62R sing 13 n n 
N2 C15 62R sing 14 n n 
N2 C14 62R sing 15 n n 
C24 F1 62R sing 16 n n 
C24 F 62R sing 17 n n 
C24 F2 62R sing 18 n n 
C15 C16 62R sing 19 n n 
C14 C13 62R sing 20 n n 
C16 C17 62R sing 21 n n 
C13 C17 62R sing 22 n n 
C13 O5 62R sing 23 n n 
C13 C12 62R sing 24 n n 
C33 N1 62R sing 25 n n 
C33 C34 62R sing 26 n n 
O5 C28 62R sing 27 n n 
C12 N1 62R sing 28 n n 
C12 O3 62R doub 29 n n 
N1 C11 62R sing 30 n n 
C34 N 62R sing 31 n n 
C11 C10 62R sing 32 n n 
C28 C31 62R sing 33 n y 
C28 C29 62R doub 34 n y 
C31 C30 62R doub 35 n y 
N C10 62R sing 36 n n 
N C 62R sing 37 n n 
C8 C7 62R sing 38 n n 
C8 C9 62R sing 39 n n 
C7 C6 62R sing 40 n n 
C29 S 62R sing 41 n y 
O C6 62R sing 42 n n 
O C1 62R sing 43 n n 
C C1 62R doub 44 n y 
C C5 62R sing 45 n y 
C30 C32 62R sing 46 n n 
C30 S 62R sing 47 n y 
F3 C32 62R sing 48 n n 
C9 O2 62R doub 49 n n 
C9 O1 62R sing 50 n n 
C1 C2 62R sing 51 n y 
C5 C4 62R doub 52 n y 
C32 F5 62R sing 53 n n 
C32 F4 62R sing 54 n n 
C2 C3 62R doub 55 n y 
C4 C3 62R sing 56 n y 
C2 H1 62R sing 57 n n 
C3 H2 62R sing 58 n n 
C4 H3 62R sing 59 n n 
C5 H4 62R sing 60 n n 
C6 H5 62R sing 61 n n 
C6 H6 62R sing 62 n n 
C10 H7 62R sing 63 n n 
C10 H8 62R sing 64 n n 
C11 H9 62R sing 65 n n 
C11 H10 62R sing 66 n n 
C15 H11 62R sing 67 n n 
C15 H12 62R sing 68 n n 
C22 H13 62R sing 69 n n 
C26 H14 62R sing 70 n n 
C26 H15 62R sing 71 n n 
C29 H16 62R sing 72 n n 
C31 H17 62R sing 73 n n 
C17 H18 62R sing 74 n n 
C17 H19 62R sing 75 n n 
C16 H20 62R sing 76 n n 
C16 H21 62R sing 77 n n 
C21 H22 62R sing 78 n n 
C20 H23 62R sing 79 n n 
C14 H24 62R sing 80 n n 
C25 H25 62R sing 81 n n 
C25 H26 62R sing 82 n n 
C27 H27 62R sing 83 n n 
C27 H28 62R sing 84 n n 
C27 H29 62R sing 85 n n 
C33 H30 62R sing 86 n n 
C33 H31 62R sing 87 n n 
C34 H32 62R sing 88 n n 
C34 H33 62R sing 89 n n 
C7 H34 62R sing 90 n n 
C7 H35 62R sing 91 n n 
C8 H36 62R sing 92 n n 
C8 H37 62R sing 93 n n 
O1 H38 62R sing 94 n n 
#
_atom_sites.entry_id                     5HMH 
_atom_sites.fract_transf_matrix[1][1]    0.025227 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025558 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007556 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 62R A 1 201 4000 62R 113 . 
D 3 SO4 A 1 202 1 SO4 SO4 . 
E 2 62R B 1 4000 4000 62R 113 . 
F 4 HOH A 1 301 7 HOH HOH . 
F 4 HOH A 2 302 14 HOH HOH . 
F 4 HOH A 3 303 65 HOH HOH . 
F 4 HOH A 4 304 94 HOH HOH . 
F 4 HOH A 5 305 5 HOH HOH . 
F 4 HOH A 6 306 32 HOH HOH . 
F 4 HOH A 7 307 75 HOH HOH . 
F 4 HOH A 8 308 83 HOH HOH . 
F 4 HOH A 9 309 37 HOH HOH . 
F 4 HOH A 10 310 70 HOH HOH . 
F 4 HOH A 11 311 63 HOH HOH . 
F 4 HOH A 12 312 41 HOH HOH . 
F 4 HOH A 13 313 22 HOH HOH . 
F 4 HOH A 14 314 11 HOH HOH . 
F 4 HOH A 15 315 44 HOH HOH . 
F 4 HOH A 16 316 33 HOH HOH . 
F 4 HOH A 17 317 46 HOH HOH . 
F 4 HOH A 18 318 10 HOH HOH . 
F 4 HOH A 19 319 60 HOH HOH . 
F 4 HOH A 20 320 54 HOH HOH . 
F 4 HOH A 21 321 69 HOH HOH . 
F 4 HOH A 22 322 90 HOH HOH . 
F 4 HOH A 23 323 77 HOH HOH . 
F 4 HOH A 24 324 21 HOH HOH . 
F 4 HOH A 25 325 64 HOH HOH . 
F 4 HOH A 26 326 24 HOH HOH . 
F 4 HOH A 27 327 13 HOH HOH . 
F 4 HOH A 28 328 74 HOH HOH . 
F 4 HOH A 29 329 2 HOH HOH . 
F 4 HOH A 30 330 85 HOH HOH . 
F 4 HOH A 31 331 43 HOH HOH . 
F 4 HOH A 32 332 8 HOH HOH . 
F 4 HOH A 33 333 40 HOH HOH . 
F 4 HOH A 34 334 49 HOH HOH . 
F 4 HOH A 35 335 29 HOH HOH . 
F 4 HOH A 36 336 9 HOH HOH . 
F 4 HOH A 37 337 20 HOH HOH . 
F 4 HOH A 38 338 88 HOH HOH . 
F 4 HOH A 39 339 34 HOH HOH . 
F 4 HOH A 40 340 17 HOH HOH . 
F 4 HOH A 41 341 45 HOH HOH . 
F 4 HOH A 42 342 86 HOH HOH . 
F 4 HOH A 43 343 81 HOH HOH . 
F 4 HOH A 44 344 82 HOH HOH . 
F 4 HOH A 45 345 1 HOH HOH . 
F 4 HOH A 46 346 50 HOH HOH . 
F 4 HOH A 47 347 73 HOH HOH . 
F 4 HOH A 48 348 95 HOH HOH . 
F 4 HOH A 49 349 6 HOH HOH . 
F 4 HOH A 50 350 58 HOH HOH . 
F 4 HOH A 51 351 62 HOH HOH . 
F 4 HOH A 52 352 48 HOH HOH . 
F 4 HOH A 53 353 76 HOH HOH . 
F 4 HOH A 54 354 31 HOH HOH . 
F 4 HOH A 55 355 97 HOH HOH . 
F 4 HOH A 56 356 100 HOH HOH . 
F 4 HOH A 57 357 39 HOH HOH . 
F 4 HOH A 58 358 28 HOH HOH . 
F 4 HOH A 59 359 19 HOH HOH . 
F 4 HOH A 60 360 99 HOH HOH . 
F 4 HOH A 61 361 87 HOH HOH . 
F 4 HOH A 62 362 61 HOH HOH . 
F 4 HOH A 63 363 25 HOH HOH . 
F 4 HOH A 64 364 91 HOH HOH . 
F 4 HOH A 65 365 92 HOH HOH . 
G 4 HOH B 1 4101 36 HOH HOH . 
G 4 HOH B 2 4102 35 HOH HOH . 
G 4 HOH B 3 4103 68 HOH HOH . 
G 4 HOH B 4 4104 89 HOH HOH . 
G 4 HOH B 5 4105 59 HOH HOH . 
G 4 HOH B 6 4106 53 HOH HOH . 
G 4 HOH B 7 4107 93 HOH HOH . 
G 4 HOH B 8 4108 98 HOH HOH . 
G 4 HOH B 9 4109 27 HOH HOH . 
G 4 HOH B 10 4110 52 HOH HOH . 
G 4 HOH B 11 4111 55 HOH HOH . 
G 4 HOH B 12 4112 15 HOH HOH . 
G 4 HOH B 13 4113 84 HOH HOH . 
G 4 HOH B 14 4114 3 HOH HOH . 
G 4 HOH B 15 4115 71 HOH HOH . 
G 4 HOH B 16 4116 72 HOH HOH . 
G 4 HOH B 17 4117 18 HOH HOH . 
G 4 HOH B 18 4118 67 HOH HOH . 
G 4 HOH B 19 4119 96 HOH HOH . 
G 4 HOH B 20 4120 66 HOH HOH . 
G 4 HOH B 21 4121 57 HOH HOH . 
G 4 HOH B 22 4122 16 HOH HOH . 
G 4 HOH B 23 4123 4 HOH HOH . 
G 4 HOH B 24 4124 12 HOH HOH . 
G 4 HOH B 25 4125 78 HOH HOH . 
G 4 HOH B 26 4126 79 HOH HOH . 
G 4 HOH B 27 4127 23 HOH HOH . 
G 4 HOH B 28 4128 38 HOH HOH . 
G 4 HOH B 29 4129 30 HOH HOH . 
G 4 HOH B 30 4130 26 HOH HOH . 
G 4 HOH B 31 4131 56 HOH HOH . 
G 4 HOH B 32 4132 80 HOH HOH . 
G 4 HOH B 33 4133 42 HOH HOH . 
G 4 HOH B 34 4134 47 HOH HOH . 
G 4 HOH B 35 4135 51 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 62R . . . C 2 -16.573 5.542 21.074 1 38.89 ? C1 62R 201 A 1 
HETATM 2 C C2 62R . . . C 2 -17.374 5.859 22.219 1 38.37 ? C2 62R 201 A 1 
HETATM 3 C C3 62R . . . C 2 -18.171 4.87 22.796 1 37.05 ? C3 62R 201 A 1 
HETATM 4 C C4 62R . . . C 2 -18.202 3.562 22.281 1 35.75 ? C4 62R 201 A 1 
HETATM 5 C C5 62R . . . C 2 -17.389 3.234 21.174 1 32.96 ? C5 62R 201 A 1 
HETATM 6 C C6 62R . . . C 2 -15.723 7.83 20.751 1 50.52 ? C6 62R 201 A 1 
HETATM 7 C C9 62R . . . C 2 -12.537 7.915 21.044 1 64.65 ? C9 62R 201 A 1 
HETATM 8 C C10 62R . . . C 2 -14.19 3.886 19.935 1 37.43 ? C10 62R 201 A 1 
HETATM 9 C C11 62R . . . C 2 -13.248 3.791 18.729 1 38.73 ? C11 62R 201 A 1 
HETATM 10 C C12 62R . . . C 2 -12.63 1.575 17.774 1 35.27 ? C12 62R 201 A 1 
HETATM 11 C C13 62R . . . C 2 -12.944 0.221 17.083 1 34.89 ? C13 62R 201 A 1 
HETATM 12 C C15 62R . . . C 2 -12.461 -1.979 15.11 1 38.92 ? C15 62R 201 A 1 
HETATM 13 C C18 62R . . . C 2 -14.682 -1.061 14.191 1 41.26 ? C18 62R 201 A 1 
HETATM 14 C C22 62R . . . C 2 -15.697 -4.552 12.896 1 45.54 ? C22 62R 201 A 1 
HETATM 15 C C26 62R . . . C 2 -12.365 1.685 13.322 1 42.76 ? C26 62R 201 A 1 
HETATM 16 F F5 62R . . . C 2 -17.815 -0.561 21.764 1 37.34 ? F5 62R 201 A 1 
HETATM 17 C C32 62R . . . C 2 -17.005 -1.527 21.418 1 36.17 ? C32 62R 201 A 1 
HETATM 18 F F3 62R . . . C 2 -17.755 -2.356 20.744 1 40.29 ? F3 62R 201 A 1 
HETATM 19 F F4 62R . . . C 2 -16.729 -2.199 22.517 1 36.73 ? F4 62R 201 A 1 
HETATM 20 C C30 62R . . . C 2 -15.812 -1.035 20.687 1 32.79 ? C30 62R 201 A 1 
HETATM 21 S S 62R . . . C 2 -14.394 -0.541 21.465 1 34.06 ? S 62R 201 A 1 
HETATM 22 C C29 62R . . . C 2 -13.686 -0.206 19.967 1 33.66 ? C29 62R 201 A 1 
HETATM 23 C C31 62R . . . C 2 -15.797 -0.965 19.323 1 34.07 ? C31 62R 201 A 1 
HETATM 24 C C28 62R . . . C 2 -14.534 -0.478 18.89 1 35.35 ? C28 62R 201 A 1 
HETATM 25 O O5 62R . . . C 2 -14.22 -0.298 17.559 1 35.59 ? O5 62R 201 A 1 
HETATM 26 C C17 62R . . . C 2 -11.776 -0.811 17.257 1 36.14 ? C17 62R 201 A 1 
HETATM 27 C C16 62R . . . C 2 -12.086 -2.161 16.601 1 37.47 ? C16 62R 201 A 1 
HETATM 28 N N2 62R . . . C 2 -13.474 -0.875 14.891 1 39.41 ? N2 62R 201 A 1 
HETATM 29 C C19 62R . . . C 2 -14.821 -2.324 13.394 1 43.67 ? C19 62R 201 A 1 
HETATM 30 C C23 62R . . . C 2 -15.639 -3.424 13.74 1 44.69 ? C23 62R 201 A 1 
HETATM 31 C C24 62R . . . C 2 -16.451 -3.391 15.035 1 45.9 ? C24 62R 201 A 1 
HETATM 32 F F2 62R . . . C 2 -15.681 -3.153 16.078 1 43.95 ? F2 62R 201 A 1 
HETATM 33 F F1 62R . . . C 2 -17.383 -2.436 15.088 1 49.53 ? F1 62R 201 A 1 
HETATM 34 F F 62R . . . C 2 -17.087 -4.523 15.349 1 44.79 ? F 62R 201 A 1 
HETATM 35 C C21 62R . . . C 2 -14.919 -4.52 11.723 1 46.91 ? C21 62R 201 A 1 
HETATM 36 N N3 62R . . . C 2 -14.114 -3.473 11.354 1 48.73 ? N3 62R 201 A 1 
HETATM 37 C C20 62R . . . C 2 -14.069 -2.396 12.178 1 46.28 ? C20 62R 201 A 1 
HETATM 38 O O4 62R . . . C 2 -15.594 -0.24 14.224 1 41.65 ? O4 62R 201 A 1 
HETATM 39 C C14 62R . . . C 2 -13.202 0.437 15.529 1 36.55 ? C14 62R 201 A 1 
HETATM 40 C C25 62R . . . C 2 -12.047 1.209 14.765 1 39.09 ? C25 62R 201 A 1 
HETATM 41 C C27 62R . . . C 2 -13.649 2.546 13.238 1 42.45 ? C27 62R 201 A 1 
HETATM 42 O O3 62R . . . C 2 -11.493 1.788 18.2 1 37.8 ? O3 62R 201 A 1 
HETATM 43 N N1 62R . . . C 2 -13.629 2.581 17.944 1 36.44 ? N1 62R 201 A 1 
HETATM 44 C C33 62R . . . C 2 -15.037 2.633 17.391 1 36.54 ? C33 62R 201 A 1 
HETATM 45 C C34 62R . . . C 2 -16.037 2.867 18.552 1 35.3 ? C34 62R 201 A 1 
HETATM 46 N N 62R . . . C 2 -15.652 3.974 19.463 1 35.13 ? N 62R 201 A 1 
HETATM 47 C C 62R . . . C 2 -16.558 4.219 20.562 1 34.45 ? C 62R 201 A 1 
HETATM 48 O O 62R . . . C 2 -15.835 6.469 20.364 1 43.98 ? O 62R 201 A 1 
HETATM 49 C C7 62R . . . C 2 -14.705 8.57 19.851 1 56.42 ? C7 62R 201 A 1 
HETATM 50 C C8 62R . . . C 2 -13.318 7.873 19.742 1 60.36 ? C8 62R 201 A 1 
HETATM 51 O O1 62R . . . C 2 -12.701 7.162 21.992 1 63.91 ? O1 62R 201 A 1 
HETATM 52 O O2 62R . . . C 2 -11.553 8.826 21.217 1 67.97 ? O2 62R 201 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           52 
#