data_5HN4 # _model_server_result.job_id W-traDamESCIJLQoUALozg _model_server_result.datetime_utc '2024-12-26 19:46:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hn4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5HN4 # _exptl.entry_id 5HN4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 206.15 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HN4 _cell.length_a 113.669 _cell.length_b 113.669 _cell.length_c 143.226 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HN4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -71.613 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 194 A ASP 194 1_555 C MN MN . A MN 402 8_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc2 A OD1 ASP 218 A ASP 218 1_555 C MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc3 B OAF 48Y . A 48Y 401 1_555 C MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc4 B OAD 48Y . A 48Y 401 1_555 C MN MN . A MN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc5 C MN MN . A MN 402 1_555 F O HOH . A HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc6 C MN MN . A MN 402 1_555 F O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? # _chem_comp.formula 'C7 H10 O7' _chem_comp.formula_weight 206.15 _chem_comp.id 48Y _chem_comp.mon_nstd_flag . _chem_comp.name '(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAE CAJ 48Y doub 1 n n OAA CAJ 48Y sing 2 n n CAJ CAH 48Y sing 3 n n CAH CAI 48Y sing 4 n n CAI CAN 48Y sing 5 n n OAD CAM 48Y sing 6 n n OAC CAL 48Y doub 7 n n CAM CAN 48Y sing 8 n n CAM CAK 48Y sing 9 n n CAN CAL 48Y sing 10 n n CAL OAG 48Y sing 11 n n CAK OAF 48Y doub 12 n n CAK OAB 48Y sing 13 n n OAB H1 48Y sing 14 n n CAM H2 48Y sing 15 n n OAD H3 48Y sing 16 n n CAN H4 48Y sing 17 n n OAG H5 48Y sing 18 n n CAI H6 48Y sing 19 n n CAI H7 48Y sing 20 n n CAH H8 48Y sing 21 n n CAH H9 48Y sing 22 n n OAA H10 48Y sing 23 n n # _atom_sites.entry_id 5HN4 _atom_sites.fract_transf_matrix[1][1] 0.008797 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008797 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006982 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 48Y A 1 401 1 48Y HIC . C 3 MN A 1 402 1 MN MN . D 4 IMD A 1 403 1 IMD IMD . E 5 IPA A 1 404 1 IPA IPA . F 6 HOH A 1 501 16 HOH HOH . F 6 HOH A 2 502 40 HOH HOH . F 6 HOH A 3 503 29 HOH HOH . F 6 HOH A 4 504 8 HOH HOH . F 6 HOH A 5 505 9 HOH HOH . F 6 HOH A 6 506 39 HOH HOH . F 6 HOH A 7 507 1 HOH HOH . F 6 HOH A 8 508 30 HOH HOH . F 6 HOH A 9 509 34 HOH HOH . F 6 HOH A 10 510 2 HOH HOH . F 6 HOH A 11 511 20 HOH HOH . F 6 HOH A 12 512 10 HOH HOH . F 6 HOH A 13 513 11 HOH HOH . F 6 HOH A 14 514 23 HOH HOH . F 6 HOH A 15 515 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAB 48Y . . . B 2 33.962 -14.425 -32.27 1 43.15 ? OAB 48Y 401 A 1 HETATM 2 C CAK 48Y . . . B 2 33.174 -14.745 -33.176 1 44.54 ? CAK 48Y 401 A 1 HETATM 3 O OAF 48Y . . . B 2 31.982 -15.043 -32.976 1 45.2 ? OAF 48Y 401 A 1 HETATM 4 C CAM 48Y . . . B 2 33.758 -14.788 -34.606 1 44.7 ? CAM 48Y 401 A 1 HETATM 5 O OAD 48Y . . . B 2 32.841 -15.354 -35.565 1 48.78 ? OAD 48Y 401 A 1 HETATM 6 C CAN 48Y . . . B 2 35.031 -15.609 -34.606 1 48.02 ? CAN 48Y 401 A 1 HETATM 7 C CAL 48Y . . . B 2 34.675 -17.078 -34.213 1 52.78 ? CAL 48Y 401 A 1 HETATM 8 O OAG 48Y . . . B 2 34.508 -17.362 -32.988 1 50.55 ? OAG 48Y 401 A 1 HETATM 9 O OAC 48Y . . . B 2 34.564 -17.889 -35.14 1 54.35 ? OAC 48Y 401 A 1 HETATM 10 C CAI 48Y . . . B 2 35.592 -15.452 -35.986 1 54.26 ? CAI 48Y 401 A 1 HETATM 11 C CAH 48Y . . . B 2 36.934 -16.191 -36.068 1 72.75 ? CAH 48Y 401 A 1 HETATM 12 C CAJ 48Y . . . B 2 37.534 -16.034 -37.493 1 81.56 ? CAJ 48Y 401 A 1 HETATM 13 O OAE 48Y . . . B 2 37.443 -17.024 -38.266 1 77.95 ? OAE 48Y 401 A 1 HETATM 14 O OAA 48Y . . . B 2 38.046 -14.918 -37.767 1 87.31 ? OAA 48Y 401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 456 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #