data_5HNB
#
_model_server_result.job_id            Hf28CpigleAgZaW-xVH3Tg 
_model_server_result.datetime_utc      '2024-11-26 05:49:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5hnb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    5HNB 
#
_exptl.entry_id    5HNB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              351.399 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[6-hydroxy-3-(3-methylbenzyl)-1H-indazol-5-yl][(3S)-3-hydroxypyrrolidin-1-yl]methanone' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5HNB 
_cell.length_a            71.232 
_cell.length_b            71.439 
_cell.length_c            171 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5HNB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H21 N3 O3' 
_chem_comp.formula_weight    351.399 
_chem_comp.id                62M 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[6-hydroxy-3-(3-methylbenzyl)-1H-indazol-5-yl][(3S)-3-hydroxypyrrolidin-1-yl]methanone' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O16 C15 62M sing 1 n n 
C15 C14 62M doub 2 n y 
C15 C10 62M sing 3 n y 
C14 C13 62M sing 4 n y 
O9 C8 62M doub 5 n n 
O1 C2 62M sing 6 n n 
C8 C10 62M sing 7 n n 
C8 N6 62M sing 8 n n 
C10 C11 62M doub 9 n y 
C5 N6 62M sing 10 n n 
C5 C4 62M sing 11 n n 
C13 N17 62M sing 12 n y 
C13 C12 62M doub 13 n y 
N6 C7 62M sing 14 n n 
N17 N18 62M sing 15 n y 
C2 C4 62M sing 16 n n 
C2 C7 62M sing 17 n n 
C11 C12 62M sing 18 n y 
C12 C19 62M sing 19 n y 
N18 C19 62M doub 20 n y 
C19 C20 62M sing 21 n n 
C22 C23 62M doub 22 n y 
C22 C21 62M sing 23 n y 
C20 C21 62M sing 24 n n 
C23 C24 62M sing 25 n y 
C21 C27 62M doub 26 n y 
C24 C25 62M doub 27 n y 
C27 C25 62M sing 28 n y 
C25 C26 62M sing 29 n n 
C2 H1 62M sing 30 n n 
C4 H2 62M sing 31 n n 
C4 H3 62M sing 32 n n 
C5 H4 62M sing 33 n n 
C5 H5 62M sing 34 n n 
C7 H6 62M sing 35 n n 
C7 H7 62M sing 36 n n 
C11 H8 62M sing 37 n n 
C23 H9 62M sing 38 n n 
C24 H10 62M sing 39 n n 
C27 H11 62M sing 40 n n 
O1 H12 62M sing 41 n n 
C14 H13 62M sing 42 n n 
O16 H14 62M sing 43 n n 
N17 H15 62M sing 44 n n 
C20 H16 62M sing 45 n n 
C20 H17 62M sing 46 n n 
C22 H18 62M sing 47 n n 
C26 H19 62M sing 48 n n 
C26 H20 62M sing 49 n n 
C26 H21 62M sing 50 n n 
#
_atom_sites.entry_id                     5HNB 
_atom_sites.fract_transf_matrix[1][1]    0.014039 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013998 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005848 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 62M A 1 401 1 62M INX . 
D 4 FMT A 1 402 3 FMT FMT . 
E 4 FMT A 1 403 5 FMT FMT . 
F 4 FMT A 1 404 6 FMT FMT . 
G 4 FMT A 1 405 7 FMT FMT . 
H 4 FMT A 1 406 8 FMT FMT . 
I 5 EDO B 1 301 1 EDO EDO . 
J 5 EDO B 1 302 2 EDO EDO . 
K 4 FMT B 1 303 4 FMT FMT . 
L 6 HOH A 1 501 36 HOH HOH . 
L 6 HOH A 2 502 120 HOH HOH . 
L 6 HOH A 3 503 100 HOH HOH . 
L 6 HOH A 4 504 47 HOH HOH . 
L 6 HOH A 5 505 5 HOH HOH . 
L 6 HOH A 6 506 44 HOH HOH . 
L 6 HOH A 7 507 121 HOH HOH . 
L 6 HOH A 8 508 32 HOH HOH . 
L 6 HOH A 9 509 80 HOH HOH . 
L 6 HOH A 10 510 43 HOH HOH . 
L 6 HOH A 11 511 130 HOH HOH . 
L 6 HOH A 12 512 45 HOH HOH . 
L 6 HOH A 13 513 75 HOH HOH . 
L 6 HOH A 14 514 72 HOH HOH . 
L 6 HOH A 15 515 40 HOH HOH . 
L 6 HOH A 16 516 68 HOH HOH . 
L 6 HOH A 17 517 123 HOH HOH . 
L 6 HOH A 18 518 67 HOH HOH . 
L 6 HOH A 19 519 77 HOH HOH . 
L 6 HOH A 20 520 26 HOH HOH . 
L 6 HOH A 21 521 113 HOH HOH . 
L 6 HOH A 22 522 93 HOH HOH . 
L 6 HOH A 23 523 83 HOH HOH . 
L 6 HOH A 24 524 13 HOH HOH . 
L 6 HOH A 25 525 116 HOH HOH . 
L 6 HOH A 26 526 41 HOH HOH . 
L 6 HOH A 27 527 63 HOH HOH . 
L 6 HOH A 28 528 124 HOH HOH . 
L 6 HOH A 29 529 65 HOH HOH . 
L 6 HOH A 30 530 39 HOH HOH . 
L 6 HOH A 31 531 6 HOH HOH . 
L 6 HOH A 32 532 30 HOH HOH . 
L 6 HOH A 33 533 34 HOH HOH . 
L 6 HOH A 34 534 33 HOH HOH . 
L 6 HOH A 35 535 48 HOH HOH . 
L 6 HOH A 36 536 19 HOH HOH . 
L 6 HOH A 37 537 9 HOH HOH . 
L 6 HOH A 38 538 60 HOH HOH . 
L 6 HOH A 39 539 31 HOH HOH . 
L 6 HOH A 40 540 87 HOH HOH . 
L 6 HOH A 41 541 66 HOH HOH . 
L 6 HOH A 42 542 88 HOH HOH . 
L 6 HOH A 43 543 114 HOH HOH . 
L 6 HOH A 44 544 61 HOH HOH . 
L 6 HOH A 45 545 79 HOH HOH . 
L 6 HOH A 46 546 101 HOH HOH . 
L 6 HOH A 47 547 2 HOH HOH . 
L 6 HOH A 48 548 102 HOH HOH . 
L 6 HOH A 49 549 28 HOH HOH . 
L 6 HOH A 50 550 38 HOH HOH . 
L 6 HOH A 51 551 84 HOH HOH . 
L 6 HOH A 52 552 86 HOH HOH . 
L 6 HOH A 53 553 58 HOH HOH . 
L 6 HOH A 54 554 119 HOH HOH . 
L 6 HOH A 55 555 18 HOH HOH . 
L 6 HOH A 56 556 46 HOH HOH . 
L 6 HOH A 57 557 20 HOH HOH . 
L 6 HOH A 58 558 69 HOH HOH . 
L 6 HOH A 59 559 24 HOH HOH . 
L 6 HOH A 60 560 27 HOH HOH . 
L 6 HOH A 61 561 115 HOH HOH . 
L 6 HOH A 62 562 1 HOH HOH . 
L 6 HOH A 63 563 81 HOH HOH . 
L 6 HOH A 64 564 4 HOH HOH . 
L 6 HOH A 65 565 35 HOH HOH . 
L 6 HOH A 66 566 125 HOH HOH . 
L 6 HOH A 67 567 42 HOH HOH . 
L 6 HOH A 68 568 29 HOH HOH . 
L 6 HOH A 69 569 71 HOH HOH . 
L 6 HOH A 70 570 122 HOH HOH . 
L 6 HOH A 71 571 25 HOH HOH . 
L 6 HOH A 72 572 85 HOH HOH . 
L 6 HOH A 73 573 131 HOH HOH . 
L 6 HOH A 74 574 62 HOH HOH . 
L 6 HOH A 75 575 22 HOH HOH . 
L 6 HOH A 76 576 21 HOH HOH . 
L 6 HOH A 77 577 23 HOH HOH . 
L 6 HOH A 78 578 78 HOH HOH . 
L 6 HOH A 79 579 70 HOH HOH . 
L 6 HOH A 80 580 73 HOH HOH . 
L 6 HOH A 81 581 59 HOH HOH . 
L 6 HOH A 82 582 37 HOH HOH . 
L 6 HOH A 83 583 82 HOH HOH . 
L 6 HOH A 84 584 74 HOH HOH . 
M 6 HOH B 1 401 49 HOH HOH . 
M 6 HOH B 2 402 110 HOH HOH . 
M 6 HOH B 3 403 10 HOH HOH . 
M 6 HOH B 4 404 107 HOH HOH . 
M 6 HOH B 5 405 99 HOH HOH . 
M 6 HOH B 6 406 103 HOH HOH . 
M 6 HOH B 7 407 76 HOH HOH . 
M 6 HOH B 8 408 11 HOH HOH . 
M 6 HOH B 9 409 52 HOH HOH . 
M 6 HOH B 10 410 108 HOH HOH . 
M 6 HOH B 11 411 57 HOH HOH . 
M 6 HOH B 12 412 17 HOH HOH . 
M 6 HOH B 13 413 53 HOH HOH . 
M 6 HOH B 14 414 95 HOH HOH . 
M 6 HOH B 15 415 50 HOH HOH . 
M 6 HOH B 16 416 54 HOH HOH . 
M 6 HOH B 17 417 109 HOH HOH . 
M 6 HOH B 18 418 16 HOH HOH . 
M 6 HOH B 19 419 112 HOH HOH . 
M 6 HOH B 20 420 89 HOH HOH . 
M 6 HOH B 21 421 96 HOH HOH . 
M 6 HOH B 22 422 7 HOH HOH . 
M 6 HOH B 23 423 3 HOH HOH . 
M 6 HOH B 24 424 105 HOH HOH . 
M 6 HOH B 25 425 55 HOH HOH . 
M 6 HOH B 26 426 64 HOH HOH . 
M 6 HOH B 27 427 12 HOH HOH . 
M 6 HOH B 28 428 51 HOH HOH . 
M 6 HOH B 29 429 92 HOH HOH . 
M 6 HOH B 30 430 14 HOH HOH . 
M 6 HOH B 31 431 104 HOH HOH . 
M 6 HOH B 32 432 117 HOH HOH . 
M 6 HOH B 33 433 56 HOH HOH . 
M 6 HOH B 34 434 15 HOH HOH . 
M 6 HOH B 35 435 8 HOH HOH . 
M 6 HOH B 36 436 94 HOH HOH . 
M 6 HOH B 37 437 111 HOH HOH . 
M 6 HOH B 38 438 126 HOH HOH . 
M 6 HOH B 39 439 98 HOH HOH . 
M 6 HOH B 40 440 90 HOH HOH . 
M 6 HOH B 41 441 91 HOH HOH . 
M 6 HOH B 42 442 106 HOH HOH . 
M 6 HOH B 43 443 127 HOH HOH . 
M 6 HOH B 44 444 128 HOH HOH . 
M 6 HOH B 45 445 118 HOH HOH . 
M 6 HOH B 46 446 97 HOH HOH . 
M 6 HOH B 47 447 129 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 62M . . . C 3 -2.059 13.095 -11.009 1 69.93 ? C2 62M 401 A 1 
HETATM 2 C C4 62M . . . C 3 -2.204 14.637 -10.961 1 70.09 ? C4 62M 401 A 1 
HETATM 3 C C5 62M . . . C 3 -3.508 14.875 -11.769 1 68.17 ? C5 62M 401 A 1 
HETATM 4 C C7 62M . . . C 3 -3.523 12.652 -10.916 1 67.2 ? C7 62M 401 A 1 
HETATM 5 C C8 62M . . . C 3 -5.585 13.519 -12.132 1 65.64 ? C8 62M 401 A 1 
HETATM 6 O O9 62M . . . C 3 -6.091 14.454 -12.724 1 68.25 ? O9 62M 401 A 1 
HETATM 7 C C11 62M . . . C 3 -6.512 11.693 -10.709 1 63.1 ? C11 62M 401 A 1 
HETATM 8 C C12 62M . . . C 3 -7.239 10.51 -10.533 1 63.06 ? C12 62M 401 A 1 
HETATM 9 C C15 62M . . . C 3 -6.981 11.662 -13.092 1 64.23 ? C15 62M 401 A 1 
HETATM 10 C C19 62M . . . C 3 -7.568 9.659 -9.383 1 65.54 ? C19 62M 401 A 1 
HETATM 11 C C21 62M . . . C 3 -5.876 10.535 -7.7 1 66.97 ? C21 62M 401 A 1 
HETATM 12 C C23 62M . . . C 3 -3.475 10.576 -7.88 1 68.31 ? C23 62M 401 A 1 
HETATM 13 C C24 62M . . . C 3 -3.446 11.826 -7.281 1 68.5 ? C24 62M 401 A 1 
HETATM 14 C C27 62M . . . C 3 -5.842 11.791 -7.101 1 68.73 ? C27 62M 401 A 1 
HETATM 15 O O1 62M . . . C 3 -1.484 12.643 -12.235 1 71.59 ? O1 62M 401 A 1 
HETATM 16 N N6 62M . . . C 3 -4.322 13.652 -11.649 1 65.94 ? N6 62M 401 A 1 
HETATM 17 C C10 62M . . . C 3 -6.366 12.27 -11.975 1 63.51 ? C10 62M 401 A 1 
HETATM 18 C C13 62M . . . C 3 -7.847 9.904 -11.666 1 64.3 ? C13 62M 401 A 1 
HETATM 19 C C14 62M . . . C 3 -7.708 10.49 -12.933 1 62.76 ? C14 62M 401 A 1 
HETATM 20 O O16 62M . . . C 3 -6.852 12.227 -14.318 1 63.73 ? O16 62M 401 A 1 
HETATM 21 N N17 62M . . . C 3 -8.487 8.782 -11.215 1 63.23 ? N17 62M 401 A 1 
HETATM 22 N N18 62M . . . C 3 -8.292 8.67 -9.835 1 64.65 ? N18 62M 401 A 1 
HETATM 23 C C20 62M . . . C 3 -7.196 9.838 -7.925 1 64.74 ? C20 62M 401 A 1 
HETATM 24 C C22 62M . . . C 3 -4.689 9.931 -8.092 1 67.79 ? C22 62M 401 A 1 
HETATM 25 C C25 62M . . . C 3 -4.626 12.431 -6.898 1 69.3 ? C25 62M 401 A 1 
HETATM 26 C C26 62M . . . C 3 -4.572 13.788 -6.254 1 72.35 ? C26 62M 401 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           245 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           26 
#