data_5HNB # _model_server_result.job_id 6O9KIocChAWFahi7jvxbMQ _model_server_result.datetime_utc '2024-11-29 17:05:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hnb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":405}' # _entry.id 5HNB # _exptl.entry_id 5HNB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HNB _cell.length_a 71.232 _cell.length_b 71.439 _cell.length_c 171 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HNB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 K N N # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 142 n n C O2 FMT sing 143 n n C H FMT sing 144 n n O2 HO2 FMT sing 145 n n # _atom_sites.entry_id 5HNB _atom_sites.fract_transf_matrix[1][1] 0.014039 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013998 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005848 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 62M A 1 401 1 62M INX . D 4 FMT A 1 402 3 FMT FMT . E 4 FMT A 1 403 5 FMT FMT . F 4 FMT A 1 404 6 FMT FMT . G 4 FMT A 1 405 7 FMT FMT . H 4 FMT A 1 406 8 FMT FMT . I 5 EDO B 1 301 1 EDO EDO . J 5 EDO B 1 302 2 EDO EDO . K 4 FMT B 1 303 4 FMT FMT . L 6 HOH A 1 501 36 HOH HOH . L 6 HOH A 2 502 120 HOH HOH . L 6 HOH A 3 503 100 HOH HOH . L 6 HOH A 4 504 47 HOH HOH . L 6 HOH A 5 505 5 HOH HOH . L 6 HOH A 6 506 44 HOH HOH . L 6 HOH A 7 507 121 HOH HOH . L 6 HOH A 8 508 32 HOH HOH . L 6 HOH A 9 509 80 HOH HOH . L 6 HOH A 10 510 43 HOH HOH . L 6 HOH A 11 511 130 HOH HOH . L 6 HOH A 12 512 45 HOH HOH . L 6 HOH A 13 513 75 HOH HOH . L 6 HOH A 14 514 72 HOH HOH . L 6 HOH A 15 515 40 HOH HOH . L 6 HOH A 16 516 68 HOH HOH . L 6 HOH A 17 517 123 HOH HOH . L 6 HOH A 18 518 67 HOH HOH . L 6 HOH A 19 519 77 HOH HOH . L 6 HOH A 20 520 26 HOH HOH . L 6 HOH A 21 521 113 HOH HOH . L 6 HOH A 22 522 93 HOH HOH . L 6 HOH A 23 523 83 HOH HOH . L 6 HOH A 24 524 13 HOH HOH . L 6 HOH A 25 525 116 HOH HOH . L 6 HOH A 26 526 41 HOH HOH . L 6 HOH A 27 527 63 HOH HOH . L 6 HOH A 28 528 124 HOH HOH . L 6 HOH A 29 529 65 HOH HOH . L 6 HOH A 30 530 39 HOH HOH . L 6 HOH A 31 531 6 HOH HOH . L 6 HOH A 32 532 30 HOH HOH . L 6 HOH A 33 533 34 HOH HOH . L 6 HOH A 34 534 33 HOH HOH . L 6 HOH A 35 535 48 HOH HOH . L 6 HOH A 36 536 19 HOH HOH . L 6 HOH A 37 537 9 HOH HOH . L 6 HOH A 38 538 60 HOH HOH . L 6 HOH A 39 539 31 HOH HOH . L 6 HOH A 40 540 87 HOH HOH . L 6 HOH A 41 541 66 HOH HOH . L 6 HOH A 42 542 88 HOH HOH . L 6 HOH A 43 543 114 HOH HOH . L 6 HOH A 44 544 61 HOH HOH . L 6 HOH A 45 545 79 HOH HOH . L 6 HOH A 46 546 101 HOH HOH . L 6 HOH A 47 547 2 HOH HOH . L 6 HOH A 48 548 102 HOH HOH . L 6 HOH A 49 549 28 HOH HOH . L 6 HOH A 50 550 38 HOH HOH . L 6 HOH A 51 551 84 HOH HOH . L 6 HOH A 52 552 86 HOH HOH . L 6 HOH A 53 553 58 HOH HOH . L 6 HOH A 54 554 119 HOH HOH . L 6 HOH A 55 555 18 HOH HOH . L 6 HOH A 56 556 46 HOH HOH . L 6 HOH A 57 557 20 HOH HOH . L 6 HOH A 58 558 69 HOH HOH . L 6 HOH A 59 559 24 HOH HOH . L 6 HOH A 60 560 27 HOH HOH . L 6 HOH A 61 561 115 HOH HOH . L 6 HOH A 62 562 1 HOH HOH . L 6 HOH A 63 563 81 HOH HOH . L 6 HOH A 64 564 4 HOH HOH . L 6 HOH A 65 565 35 HOH HOH . L 6 HOH A 66 566 125 HOH HOH . L 6 HOH A 67 567 42 HOH HOH . L 6 HOH A 68 568 29 HOH HOH . L 6 HOH A 69 569 71 HOH HOH . L 6 HOH A 70 570 122 HOH HOH . L 6 HOH A 71 571 25 HOH HOH . L 6 HOH A 72 572 85 HOH HOH . L 6 HOH A 73 573 131 HOH HOH . L 6 HOH A 74 574 62 HOH HOH . L 6 HOH A 75 575 22 HOH HOH . L 6 HOH A 76 576 21 HOH HOH . L 6 HOH A 77 577 23 HOH HOH . L 6 HOH A 78 578 78 HOH HOH . L 6 HOH A 79 579 70 HOH HOH . L 6 HOH A 80 580 73 HOH HOH . L 6 HOH A 81 581 59 HOH HOH . L 6 HOH A 82 582 37 HOH HOH . L 6 HOH A 83 583 82 HOH HOH . L 6 HOH A 84 584 74 HOH HOH . M 6 HOH B 1 401 49 HOH HOH . M 6 HOH B 2 402 110 HOH HOH . M 6 HOH B 3 403 10 HOH HOH . M 6 HOH B 4 404 107 HOH HOH . M 6 HOH B 5 405 99 HOH HOH . M 6 HOH B 6 406 103 HOH HOH . M 6 HOH B 7 407 76 HOH HOH . M 6 HOH B 8 408 11 HOH HOH . M 6 HOH B 9 409 52 HOH HOH . M 6 HOH B 10 410 108 HOH HOH . M 6 HOH B 11 411 57 HOH HOH . M 6 HOH B 12 412 17 HOH HOH . M 6 HOH B 13 413 53 HOH HOH . M 6 HOH B 14 414 95 HOH HOH . M 6 HOH B 15 415 50 HOH HOH . M 6 HOH B 16 416 54 HOH HOH . M 6 HOH B 17 417 109 HOH HOH . M 6 HOH B 18 418 16 HOH HOH . M 6 HOH B 19 419 112 HOH HOH . M 6 HOH B 20 420 89 HOH HOH . M 6 HOH B 21 421 96 HOH HOH . M 6 HOH B 22 422 7 HOH HOH . M 6 HOH B 23 423 3 HOH HOH . M 6 HOH B 24 424 105 HOH HOH . M 6 HOH B 25 425 55 HOH HOH . M 6 HOH B 26 426 64 HOH HOH . M 6 HOH B 27 427 12 HOH HOH . M 6 HOH B 28 428 51 HOH HOH . M 6 HOH B 29 429 92 HOH HOH . M 6 HOH B 30 430 14 HOH HOH . M 6 HOH B 31 431 104 HOH HOH . M 6 HOH B 32 432 117 HOH HOH . M 6 HOH B 33 433 56 HOH HOH . M 6 HOH B 34 434 15 HOH HOH . M 6 HOH B 35 435 8 HOH HOH . M 6 HOH B 36 436 94 HOH HOH . M 6 HOH B 37 437 111 HOH HOH . M 6 HOH B 38 438 126 HOH HOH . M 6 HOH B 39 439 98 HOH HOH . M 6 HOH B 40 440 90 HOH HOH . M 6 HOH B 41 441 91 HOH HOH . M 6 HOH B 42 442 106 HOH HOH . M 6 HOH B 43 443 127 HOH HOH . M 6 HOH B 44 444 128 HOH HOH . M 6 HOH B 45 445 118 HOH HOH . M 6 HOH B 46 446 97 HOH HOH . M 6 HOH B 47 447 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . G 4 -6.56 -7.27 -13.015 1 79.57 ? C FMT 405 A 1 HETATM 2 O O1 FMT . . . G 4 -7.106 -6.838 -14.031 1 79.23 ? O1 FMT 405 A 1 HETATM 3 O O2 FMT . . . G 4 -6.934 -6.946 -11.886 1 79.35 ? O2 FMT 405 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 403 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #