data_5HPF # _model_server_result.job_id XTI2qaj3KOqbNp8RI6hRXw _model_server_result.datetime_utc '2025-01-10 21:48:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hpf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":301}' # _entry.id 5HPF # _exptl.entry_id 5HPF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HPF _cell.length_a 111.348 _cell.length_b 111.348 _cell.length_c 282.174 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HPF _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,O 1 1 B,H,P 2 1 C,I,J,K,L,M,N,Q 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 G N N ? 2 I N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 54 A GLY 147 1_555 A N MSE 55 A MSE 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale2 A C MSE 55 A MSE 148 1_555 A N HIS 56 A HIS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C CYS 147 A CYS 240 1_555 A N MSE 148 A MSE 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C MSE 148 A MSE 241 1_555 A N SER 149 A SER 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 B C GLY 54 B GLY 147 1_555 B N MSE 55 B MSE 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale6 B C MSE 55 B MSE 148 1_555 B N HIS 56 B HIS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 B C CYS 147 B CYS 240 1_555 B N MSE 148 B MSE 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 B C MSE 148 B MSE 241 1_555 B N SER 149 B SER 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale9 C C GLY 54 C GLY 147 1_555 C N MSE 55 C MSE 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale10 C C MSE 55 C MSE 148 1_555 C N HIS 56 C HIS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 C C CYS 147 C CYS 240 1_555 C N MSE 148 C MSE 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale12 C C MSE 148 C MSE 241 1_555 C N SER 149 C SER 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 273 n n P O2 PO4 sing 274 n n P O3 PO4 sing 275 n n P O4 PO4 sing 276 n n # _atom_sites.entry_id 5HPF _atom_sites.fract_transf_matrix[1][1] 0.008981 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003544 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 PO4 A 1 301 301 PO4 PO4 . E 3 GOL A 1 302 302 GOL GOL . F 3 GOL A 1 303 303 GOL GOL . G 2 PO4 A 1 304 304 PO4 PO4 . H 4 CL B 1 301 301 CL CL . I 2 PO4 C 1 301 301 PO4 PO4 . J 3 GOL C 1 302 302 GOL GOL . K 3 GOL C 1 303 303 GOL GOL . L 2 PO4 C 1 304 304 PO4 PO4 . M 3 GOL C 1 305 305 GOL GOL . N 3 GOL C 1 306 306 GOL GOL . O 5 HOH A 1 401 85 HOH HOH . O 5 HOH A 2 402 114 HOH HOH . O 5 HOH A 3 403 87 HOH HOH . O 5 HOH A 4 404 54 HOH HOH . O 5 HOH A 5 405 12 HOH HOH . O 5 HOH A 6 406 31 HOH HOH . O 5 HOH A 7 407 45 HOH HOH . O 5 HOH A 8 408 14 HOH HOH . O 5 HOH A 9 409 20 HOH HOH . O 5 HOH A 10 410 24 HOH HOH . O 5 HOH A 11 411 57 HOH HOH . O 5 HOH A 12 412 111 HOH HOH . O 5 HOH A 13 413 117 HOH HOH . O 5 HOH A 14 414 30 HOH HOH . O 5 HOH A 15 415 79 HOH HOH . O 5 HOH A 16 416 40 HOH HOH . O 5 HOH A 17 417 72 HOH HOH . O 5 HOH A 18 418 4 HOH HOH . O 5 HOH A 19 419 39 HOH HOH . O 5 HOH A 20 420 29 HOH HOH . O 5 HOH A 21 421 13 HOH HOH . O 5 HOH A 22 422 94 HOH HOH . O 5 HOH A 23 423 37 HOH HOH . O 5 HOH A 24 424 103 HOH HOH . O 5 HOH A 25 425 65 HOH HOH . O 5 HOH A 26 426 16 HOH HOH . O 5 HOH A 27 427 69 HOH HOH . O 5 HOH A 28 428 107 HOH HOH . O 5 HOH A 29 429 84 HOH HOH . O 5 HOH A 30 430 10 HOH HOH . O 5 HOH A 31 431 61 HOH HOH . O 5 HOH A 32 432 5 HOH HOH . O 5 HOH A 33 433 48 HOH HOH . O 5 HOH A 34 434 44 HOH HOH . O 5 HOH A 35 435 78 HOH HOH . O 5 HOH A 36 436 9 HOH HOH . O 5 HOH A 37 437 83 HOH HOH . O 5 HOH A 38 438 60 HOH HOH . O 5 HOH A 39 439 21 HOH HOH . O 5 HOH A 40 440 108 HOH HOH . O 5 HOH A 41 441 46 HOH HOH . O 5 HOH A 42 442 28 HOH HOH . O 5 HOH A 43 443 66 HOH HOH . O 5 HOH A 44 444 8 HOH HOH . O 5 HOH A 45 445 81 HOH HOH . O 5 HOH A 46 446 110 HOH HOH . O 5 HOH A 47 447 80 HOH HOH . O 5 HOH A 48 448 116 HOH HOH . O 5 HOH A 49 449 1 HOH HOH . O 5 HOH A 50 450 62 HOH HOH . O 5 HOH A 51 451 95 HOH HOH . O 5 HOH A 52 452 109 HOH HOH . O 5 HOH A 53 453 74 HOH HOH . O 5 HOH A 54 454 2 HOH HOH . O 5 HOH A 55 455 102 HOH HOH . O 5 HOH A 56 456 90 HOH HOH . O 5 HOH A 57 457 42 HOH HOH . O 5 HOH A 58 458 51 HOH HOH . P 5 HOH B 1 401 105 HOH HOH . P 5 HOH B 2 402 25 HOH HOH . P 5 HOH B 3 403 104 HOH HOH . P 5 HOH B 4 404 41 HOH HOH . P 5 HOH B 5 405 52 HOH HOH . P 5 HOH B 6 406 92 HOH HOH . P 5 HOH B 7 407 3 HOH HOH . P 5 HOH B 8 408 47 HOH HOH . P 5 HOH B 9 409 93 HOH HOH . P 5 HOH B 10 410 55 HOH HOH . P 5 HOH B 11 411 64 HOH HOH . P 5 HOH B 12 412 106 HOH HOH . P 5 HOH B 13 413 91 HOH HOH . Q 5 HOH C 1 401 86 HOH HOH . Q 5 HOH C 2 402 115 HOH HOH . Q 5 HOH C 3 403 82 HOH HOH . Q 5 HOH C 4 404 88 HOH HOH . Q 5 HOH C 5 405 11 HOH HOH . Q 5 HOH C 6 406 18 HOH HOH . Q 5 HOH C 7 407 26 HOH HOH . Q 5 HOH C 8 408 75 HOH HOH . Q 5 HOH C 9 409 56 HOH HOH . Q 5 HOH C 10 410 23 HOH HOH . Q 5 HOH C 11 411 89 HOH HOH . Q 5 HOH C 12 412 73 HOH HOH . Q 5 HOH C 13 413 15 HOH HOH . Q 5 HOH C 14 414 96 HOH HOH . Q 5 HOH C 15 415 98 HOH HOH . Q 5 HOH C 16 416 50 HOH HOH . Q 5 HOH C 17 417 38 HOH HOH . Q 5 HOH C 18 418 101 HOH HOH . Q 5 HOH C 19 419 17 HOH HOH . Q 5 HOH C 20 420 19 HOH HOH . Q 5 HOH C 21 421 63 HOH HOH . Q 5 HOH C 22 422 70 HOH HOH . Q 5 HOH C 23 423 36 HOH HOH . Q 5 HOH C 24 424 22 HOH HOH . Q 5 HOH C 25 425 71 HOH HOH . Q 5 HOH C 26 426 76 HOH HOH . Q 5 HOH C 27 427 113 HOH HOH . Q 5 HOH C 28 428 43 HOH HOH . Q 5 HOH C 29 429 112 HOH HOH . Q 5 HOH C 30 430 59 HOH HOH . Q 5 HOH C 31 431 58 HOH HOH . Q 5 HOH C 32 432 68 HOH HOH . Q 5 HOH C 33 433 27 HOH HOH . Q 5 HOH C 34 434 34 HOH HOH . Q 5 HOH C 35 435 32 HOH HOH . Q 5 HOH C 36 436 7 HOH HOH . Q 5 HOH C 37 437 99 HOH HOH . Q 5 HOH C 38 438 35 HOH HOH . Q 5 HOH C 39 439 100 HOH HOH . Q 5 HOH C 40 440 6 HOH HOH . Q 5 HOH C 41 441 49 HOH HOH . Q 5 HOH C 42 442 77 HOH HOH . Q 5 HOH C 43 443 97 HOH HOH . Q 5 HOH C 44 444 33 HOH HOH . Q 5 HOH C 45 445 67 HOH HOH . Q 5 HOH C 46 446 53 HOH HOH . Q 5 HOH C 47 447 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . I 2 -7.802 -30.289 88.977 1 138.83 ? P PO4 301 C 1 HETATM 2 O O1 PO4 . . . I 2 -7.713 -29.716 87.574 1 125.67 ? O1 PO4 301 C 1 HETATM 3 O O2 PO4 . . . I 2 -9.255 -30.662 89.246 1 120.45 ? O2 PO4 301 C 1 HETATM 4 O O3 PO4 . . . I 2 -6.87 -31.498 89.128 1 117.31 ? O3 PO4 301 C 1 HETATM 5 O O4 PO4 . . . I 2 -7.359 -29.226 89.965 1 136.85 ? O4 PO4 301 C 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #