data_5HPQ # _model_server_result.job_id SGYSjgGghRI4dF5-_kgKdA _model_server_result.datetime_utc '2024-11-25 15:53:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hpq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5HPQ # _exptl.entry_id 5HPQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5HPQ _cell.length_a 124.89 _cell.length_b 124.89 _cell.length_c 40.63 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HPQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 117 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 117 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 196 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 196 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.054 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 5HPQ _atom_sites.fract_transf_matrix[1][1] 0.008007 _atom_sites.fract_transf_matrix[1][2] 0.004623 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009246 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024612 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 301 270 ACT ACT . C 3 HOH A 1 401 296 HOH HOH . C 3 HOH A 2 402 273 HOH HOH . C 3 HOH A 3 403 312 HOH HOH . C 3 HOH A 4 404 324 HOH HOH . C 3 HOH A 5 405 318 HOH HOH . C 3 HOH A 6 406 298 HOH HOH . C 3 HOH A 7 407 305 HOH HOH . C 3 HOH A 8 408 293 HOH HOH . C 3 HOH A 9 409 313 HOH HOH . C 3 HOH A 10 410 287 HOH HOH . C 3 HOH A 11 411 315 HOH HOH . C 3 HOH A 12 412 322 HOH HOH . C 3 HOH A 13 413 302 HOH HOH . C 3 HOH A 14 414 303 HOH HOH . C 3 HOH A 15 415 291 HOH HOH . C 3 HOH A 16 416 288 HOH HOH . C 3 HOH A 17 417 271 HOH HOH . C 3 HOH A 18 418 277 HOH HOH . C 3 HOH A 19 419 299 HOH HOH . C 3 HOH A 20 420 279 HOH HOH . C 3 HOH A 21 421 284 HOH HOH . C 3 HOH A 22 422 320 HOH HOH . C 3 HOH A 23 423 289 HOH HOH . C 3 HOH A 24 424 306 HOH HOH . C 3 HOH A 25 425 294 HOH HOH . C 3 HOH A 26 426 283 HOH HOH . C 3 HOH A 27 427 317 HOH HOH . C 3 HOH A 28 428 300 HOH HOH . C 3 HOH A 29 429 274 HOH HOH . C 3 HOH A 30 430 272 HOH HOH . C 3 HOH A 31 431 275 HOH HOH . C 3 HOH A 32 432 280 HOH HOH . C 3 HOH A 33 433 278 HOH HOH . C 3 HOH A 34 434 282 HOH HOH . C 3 HOH A 35 435 295 HOH HOH . C 3 HOH A 36 436 310 HOH HOH . C 3 HOH A 37 437 297 HOH HOH . C 3 HOH A 38 438 323 HOH HOH . C 3 HOH A 39 439 285 HOH HOH . C 3 HOH A 40 440 292 HOH HOH . C 3 HOH A 41 441 276 HOH HOH . C 3 HOH A 42 442 281 HOH HOH . C 3 HOH A 43 443 309 HOH HOH . C 3 HOH A 44 444 290 HOH HOH . C 3 HOH A 45 445 301 HOH HOH . C 3 HOH A 46 446 286 HOH HOH . C 3 HOH A 47 447 321 HOH HOH . C 3 HOH A 48 448 319 HOH HOH . C 3 HOH A 49 449 308 HOH HOH . C 3 HOH A 50 450 314 HOH HOH . C 3 HOH A 51 451 311 HOH HOH . C 3 HOH A 52 452 316 HOH HOH . C 3 HOH A 53 453 325 HOH HOH . C 3 HOH A 54 454 304 HOH HOH . C 3 HOH A 55 455 307 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . B 2 -20.599 10.121 -12.617 1 26.02 ? C ACT 301 A 1 HETATM 2 O O ACT . . . B 2 -19.412 9.632 -12.468 1 24.29 ? O ACT 301 A 1 HETATM 3 O OXT ACT . . . B 2 -21.031 11.095 -11.965 1 22.2 ? OXT ACT 301 A 1 HETATM 4 C CH3 ACT . . . B 2 -21.56 9.551 -13.619 1 25.96 ? CH3 ACT 301 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #