data_5HRN # _model_server_result.job_id Op-bvdC7BherGBtSBFFrOw _model_server_result.datetime_utc '2024-11-04 22:53:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hrn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 5HRN # _exptl.entry_id 5HRN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5HRN _cell.length_a 72.67 _cell.length_b 72.67 _cell.length_c 65.44 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HRN _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 43.626667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 168 n n C1 C2 EDO sing 169 n n C1 H11 EDO sing 170 n n C1 H12 EDO sing 171 n n O1 HO1 EDO sing 172 n n C2 O2 EDO sing 173 n n C2 H21 EDO sing 174 n n C2 H22 EDO sing 175 n n O2 HO2 EDO sing 176 n n # _atom_sites.entry_id 5HRN _atom_sites.fract_transf_matrix[1][1] 0.013761 _atom_sites.fract_transf_matrix[1][2] 0.007945 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01589 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CAC A 1 301 1 CAC CAC . C 2 CAC A 1 302 2 CAC CAC . D 3 SO4 A 1 303 1 SO4 SO4 . E 4 EDO A 1 304 1 EDO EDO . F 4 EDO A 1 305 2 EDO EDO . G 5 65P A 1 306 1 65P LIG . H 6 HOH A 1 401 104 HOH HOH . H 6 HOH A 2 402 85 HOH HOH . H 6 HOH A 3 403 49 HOH HOH . H 6 HOH A 4 404 163 HOH HOH . H 6 HOH A 5 405 158 HOH HOH . H 6 HOH A 6 406 157 HOH HOH . H 6 HOH A 7 407 153 HOH HOH . H 6 HOH A 8 408 162 HOH HOH . H 6 HOH A 9 409 103 HOH HOH . H 6 HOH A 10 410 89 HOH HOH . H 6 HOH A 11 411 81 HOH HOH . H 6 HOH A 12 412 156 HOH HOH . H 6 HOH A 13 413 84 HOH HOH . H 6 HOH A 14 414 16 HOH HOH . H 6 HOH A 15 415 47 HOH HOH . H 6 HOH A 16 416 77 HOH HOH . H 6 HOH A 17 417 52 HOH HOH . H 6 HOH A 18 418 37 HOH HOH . H 6 HOH A 19 419 95 HOH HOH . H 6 HOH A 20 420 110 HOH HOH . H 6 HOH A 21 421 97 HOH HOH . H 6 HOH A 22 422 7 HOH HOH . H 6 HOH A 23 423 159 HOH HOH . H 6 HOH A 24 424 34 HOH HOH . H 6 HOH A 25 425 41 HOH HOH . H 6 HOH A 26 426 73 HOH HOH . H 6 HOH A 27 427 54 HOH HOH . H 6 HOH A 28 428 31 HOH HOH . H 6 HOH A 29 429 121 HOH HOH . H 6 HOH A 30 430 28 HOH HOH . H 6 HOH A 31 431 12 HOH HOH . H 6 HOH A 32 432 94 HOH HOH . H 6 HOH A 33 433 29 HOH HOH . H 6 HOH A 34 434 72 HOH HOH . H 6 HOH A 35 435 27 HOH HOH . H 6 HOH A 36 436 127 HOH HOH . H 6 HOH A 37 437 108 HOH HOH . H 6 HOH A 38 438 38 HOH HOH . H 6 HOH A 39 439 160 HOH HOH . H 6 HOH A 40 440 6 HOH HOH . H 6 HOH A 41 441 43 HOH HOH . H 6 HOH A 42 442 134 HOH HOH . H 6 HOH A 43 443 5 HOH HOH . H 6 HOH A 44 444 2 HOH HOH . H 6 HOH A 45 445 86 HOH HOH . H 6 HOH A 46 446 10 HOH HOH . H 6 HOH A 47 447 120 HOH HOH . H 6 HOH A 48 448 154 HOH HOH . H 6 HOH A 49 449 14 HOH HOH . H 6 HOH A 50 450 50 HOH HOH . H 6 HOH A 51 451 130 HOH HOH . H 6 HOH A 52 452 25 HOH HOH . H 6 HOH A 53 453 4 HOH HOH . H 6 HOH A 54 454 107 HOH HOH . H 6 HOH A 55 455 118 HOH HOH . H 6 HOH A 56 456 36 HOH HOH . H 6 HOH A 57 457 23 HOH HOH . H 6 HOH A 58 458 60 HOH HOH . H 6 HOH A 59 459 102 HOH HOH . H 6 HOH A 60 460 96 HOH HOH . H 6 HOH A 61 461 67 HOH HOH . H 6 HOH A 62 462 74 HOH HOH . H 6 HOH A 63 463 93 HOH HOH . H 6 HOH A 64 464 35 HOH HOH . H 6 HOH A 65 465 3 HOH HOH . H 6 HOH A 66 466 32 HOH HOH . H 6 HOH A 67 467 1 HOH HOH . H 6 HOH A 68 468 11 HOH HOH . H 6 HOH A 69 469 143 HOH HOH . H 6 HOH A 70 470 55 HOH HOH . H 6 HOH A 71 471 82 HOH HOH . H 6 HOH A 72 472 78 HOH HOH . H 6 HOH A 73 473 141 HOH HOH . H 6 HOH A 74 474 63 HOH HOH . H 6 HOH A 75 475 142 HOH HOH . H 6 HOH A 76 476 138 HOH HOH . H 6 HOH A 77 477 48 HOH HOH . H 6 HOH A 78 478 18 HOH HOH . H 6 HOH A 79 479 8 HOH HOH . H 6 HOH A 80 480 53 HOH HOH . H 6 HOH A 81 481 9 HOH HOH . H 6 HOH A 82 482 88 HOH HOH . H 6 HOH A 83 483 90 HOH HOH . H 6 HOH A 84 484 152 HOH HOH . H 6 HOH A 85 485 51 HOH HOH . H 6 HOH A 86 486 13 HOH HOH . H 6 HOH A 87 487 64 HOH HOH . H 6 HOH A 88 488 114 HOH HOH . H 6 HOH A 89 489 101 HOH HOH . H 6 HOH A 90 490 26 HOH HOH . H 6 HOH A 91 491 87 HOH HOH . H 6 HOH A 92 492 105 HOH HOH . H 6 HOH A 93 493 75 HOH HOH . H 6 HOH A 94 494 40 HOH HOH . H 6 HOH A 95 495 21 HOH HOH . H 6 HOH A 96 496 117 HOH HOH . H 6 HOH A 97 497 137 HOH HOH . H 6 HOH A 98 498 91 HOH HOH . H 6 HOH A 99 499 56 HOH HOH . H 6 HOH A 100 500 112 HOH HOH . H 6 HOH A 101 501 19 HOH HOH . H 6 HOH A 102 502 42 HOH HOH . H 6 HOH A 103 503 39 HOH HOH . H 6 HOH A 104 504 111 HOH HOH . H 6 HOH A 105 505 99 HOH HOH . H 6 HOH A 106 506 129 HOH HOH . H 6 HOH A 107 507 22 HOH HOH . H 6 HOH A 108 508 80 HOH HOH . H 6 HOH A 109 509 146 HOH HOH . H 6 HOH A 110 510 122 HOH HOH . H 6 HOH A 111 511 83 HOH HOH . H 6 HOH A 112 512 66 HOH HOH . H 6 HOH A 113 513 65 HOH HOH . H 6 HOH A 114 514 44 HOH HOH . H 6 HOH A 115 515 70 HOH HOH . H 6 HOH A 116 516 20 HOH HOH . H 6 HOH A 117 517 132 HOH HOH . H 6 HOH A 118 518 151 HOH HOH . H 6 HOH A 119 519 71 HOH HOH . H 6 HOH A 120 520 17 HOH HOH . H 6 HOH A 121 521 140 HOH HOH . H 6 HOH A 122 522 45 HOH HOH . H 6 HOH A 123 523 133 HOH HOH . H 6 HOH A 124 524 113 HOH HOH . H 6 HOH A 125 525 15 HOH HOH . H 6 HOH A 126 526 33 HOH HOH . H 6 HOH A 127 527 123 HOH HOH . H 6 HOH A 128 528 79 HOH HOH . H 6 HOH A 129 529 61 HOH HOH . H 6 HOH A 130 530 161 HOH HOH . H 6 HOH A 131 531 150 HOH HOH . H 6 HOH A 132 532 128 HOH HOH . H 6 HOH A 133 533 136 HOH HOH . H 6 HOH A 134 534 106 HOH HOH . H 6 HOH A 135 535 124 HOH HOH . H 6 HOH A 136 536 100 HOH HOH . H 6 HOH A 137 537 139 HOH HOH . H 6 HOH A 138 538 148 HOH HOH . H 6 HOH A 139 539 126 HOH HOH . H 6 HOH A 140 540 68 HOH HOH . H 6 HOH A 141 541 155 HOH HOH . H 6 HOH A 142 542 69 HOH HOH . H 6 HOH A 143 543 131 HOH HOH . H 6 HOH A 144 544 135 HOH HOH . H 6 HOH A 145 545 57 HOH HOH . H 6 HOH A 146 546 125 HOH HOH . H 6 HOH A 147 547 58 HOH HOH . H 6 HOH A 148 548 76 HOH HOH . H 6 HOH A 149 549 109 HOH HOH . H 6 HOH A 150 550 145 HOH HOH . H 6 HOH A 151 551 119 HOH HOH . H 6 HOH A 152 552 59 HOH HOH . H 6 HOH A 153 553 30 HOH HOH . H 6 HOH A 154 554 24 HOH HOH . H 6 HOH A 155 555 46 HOH HOH . H 6 HOH A 156 556 92 HOH HOH . H 6 HOH A 157 557 62 HOH HOH . H 6 HOH A 158 558 147 HOH HOH . H 6 HOH A 159 559 115 HOH HOH . H 6 HOH A 160 560 98 HOH HOH . H 6 HOH A 161 561 149 HOH HOH . H 6 HOH A 162 562 116 HOH HOH . H 6 HOH A 163 563 144 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 4 -27.411 -6.681 17.114 1 26 ? C1 EDO 304 A 1 HETATM 2 O O1 EDO . . . E 4 -26.339 -7.605 16.948 1 24.82 ? O1 EDO 304 A 1 HETATM 3 C C2 EDO . . . E 4 -27.531 -5.696 15.923 1 28.8 ? C2 EDO 304 A 1 HETATM 4 O O2 EDO . . . E 4 -26.259 -5.206 15.578 1 34.13 ? O2 EDO 304 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #