data_5HRP
#
_model_server_result.job_id            mrR0hglulIwavWcZ2YSfwQ 
_model_server_result.datetime_utc      '2025-08-29 11:17:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5hrp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":310}' 
#
_entry.id    5HRP 
#
_exptl.entry_id    5HRP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              534.594 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-tert-butoxy[1-(3,4-difluorobenzyl)-6-methyl-4-(5-methyl-3,4-dihydro-2H-chromen-6-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]acetic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5HRP 
_cell.length_a            72.817 
_cell.length_b            72.817 
_cell.length_c            65.867 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5HRP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 43.911333 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 17 A CYS 65 1_555 B AS CAC . A CAC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 sing 
metalc ? metalc2 A SG CYS 82 A CYS 130 1_555 C AS CAC . A CAC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 sing 
#
_chem_comp.formula           'C31 H32 F2 N2 O4' 
_chem_comp.formula_weight    534.594 
_chem_comp.id                65P 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-tert-butoxy[1-(3,4-difluorobenzyl)-6-methyl-4-(5-methyl-3,4-dihydro-2H-chromen-6-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]acetic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F20 C19 65P sing 1 n n 
F18 C17 65P sing 2 n n 
C42 C39 65P sing 3 n n 
C42 C45 65P sing 4 n n 
C39 C36 65P sing 5 n n 
C47 C46 65P sing 6 n n 
O69 C68 65P doub 7 n n 
C19 C17 65P doub 8 n y 
C19 C21 65P sing 9 n y 
C17 C15 65P sing 10 n y 
O71 C68 65P sing 11 n n 
C68 C52 65P sing 12 n n 
C36 O35 65P sing 13 n n 
C45 C46 65P doub 14 n y 
C45 C34 65P sing 15 n y 
C46 C29 65P sing 16 n y 
C21 C12 65P doub 17 n y 
C15 C13 65P doub 18 n y 
C52 C51 65P sing 19 n n 
C52 O54 65P sing 20 n n 
O35 C34 65P sing 21 n n 
C34 C32 65P doub 22 n y 
C29 C28 65P sing 23 n n 
C29 C30 65P doub 24 n y 
C51 C28 65P doub 25 n y 
C51 C05 65P sing 26 n y 
C12 C13 65P sing 27 n y 
C12 C09 65P sing 28 n n 
C28 C27 65P sing 29 n y 
C01 C05 65P sing 30 n n 
C05 N06 65P doub 31 n y 
C27 C25 65P sing 32 n y 
C27 C07 65P doub 33 n y 
N06 C07 65P sing 34 n y 
O54 C55 65P sing 35 n n 
C25 C23 65P doub 36 n y 
C07 N08 65P sing 37 n y 
N08 C23 65P sing 38 n y 
N08 C09 65P sing 39 n n 
C32 C30 65P sing 40 n y 
C60 C55 65P sing 41 n n 
C55 C56 65P sing 42 n n 
C55 C64 65P sing 43 n n 
C13 H1 65P sing 44 n n 
C15 H2 65P sing 45 n n 
C21 H3 65P sing 46 n n 
C01 H4 65P sing 47 n n 
C01 H5 65P sing 48 n n 
C01 H6 65P sing 49 n n 
C09 H7 65P sing 50 n n 
C09 H8 65P sing 51 n n 
C23 H9 65P sing 52 n n 
C25 H10 65P sing 53 n n 
C30 H11 65P sing 54 n n 
C32 H12 65P sing 55 n n 
C36 H13 65P sing 56 n n 
C36 H14 65P sing 57 n n 
C39 H15 65P sing 58 n n 
C39 H16 65P sing 59 n n 
C42 H17 65P sing 60 n n 
C42 H18 65P sing 61 n n 
C47 H19 65P sing 62 n n 
C47 H20 65P sing 63 n n 
C47 H21 65P sing 64 n n 
C52 H22 65P sing 65 n n 
C56 H23 65P sing 66 n n 
C56 H24 65P sing 67 n n 
C56 H25 65P sing 68 n n 
C60 H26 65P sing 69 n n 
C60 H27 65P sing 70 n n 
C60 H28 65P sing 71 n n 
C64 H29 65P sing 72 n n 
C64 H30 65P sing 73 n n 
C64 H31 65P sing 74 n n 
O71 H32 65P sing 75 n n 
#
_atom_sites.entry_id                     5HRP 
_atom_sites.fract_transf_matrix[1][1]    0.013733 
_atom_sites.fract_transf_matrix[1][2]    0.007929 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015858 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015182 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CAC A 1 301 1 CAC CAC . 
C 2 CAC A 1 302 2 CAC CAC . 
D 3 SO4 A 1 303 1 SO4 SO4 . 
E 3 SO4 A 1 304 2 SO4 SO4 . 
F 3 SO4 A 1 305 3 SO4 SO4 . 
G 3 SO4 A 1 306 4 SO4 SO4 . 
H 4 EDO A 1 307 1 EDO EDO . 
I 4 EDO A 1 308 2 EDO EDO . 
J 4 EDO A 1 309 3 EDO EDO . 
K 5 65P A 1 310 1 65P LIG . 
L 6 HOH A 1 401 101 HOH HOH . 
L 6 HOH A 2 402 53 HOH HOH . 
L 6 HOH A 3 403 77 HOH HOH . 
L 6 HOH A 4 404 46 HOH HOH . 
L 6 HOH A 5 405 115 HOH HOH . 
L 6 HOH A 6 406 99 HOH HOH . 
L 6 HOH A 7 407 105 HOH HOH . 
L 6 HOH A 8 408 9 HOH HOH . 
L 6 HOH A 9 409 61 HOH HOH . 
L 6 HOH A 10 410 52 HOH HOH . 
L 6 HOH A 11 411 73 HOH HOH . 
L 6 HOH A 12 412 130 HOH HOH . 
L 6 HOH A 13 413 20 HOH HOH . 
L 6 HOH A 14 414 127 HOH HOH . 
L 6 HOH A 15 415 128 HOH HOH . 
L 6 HOH A 16 416 147 HOH HOH . 
L 6 HOH A 17 417 30 HOH HOH . 
L 6 HOH A 18 418 76 HOH HOH . 
L 6 HOH A 19 419 143 HOH HOH . 
L 6 HOH A 20 420 85 HOH HOH . 
L 6 HOH A 21 421 15 HOH HOH . 
L 6 HOH A 22 422 146 HOH HOH . 
L 6 HOH A 23 423 150 HOH HOH . 
L 6 HOH A 24 424 94 HOH HOH . 
L 6 HOH A 25 425 31 HOH HOH . 
L 6 HOH A 26 426 108 HOH HOH . 
L 6 HOH A 27 427 6 HOH HOH . 
L 6 HOH A 28 428 98 HOH HOH . 
L 6 HOH A 29 429 68 HOH HOH . 
L 6 HOH A 30 430 5 HOH HOH . 
L 6 HOH A 31 431 27 HOH HOH . 
L 6 HOH A 32 432 43 HOH HOH . 
L 6 HOH A 33 433 92 HOH HOH . 
L 6 HOH A 34 434 91 HOH HOH . 
L 6 HOH A 35 435 104 HOH HOH . 
L 6 HOH A 36 436 62 HOH HOH . 
L 6 HOH A 37 437 129 HOH HOH . 
L 6 HOH A 38 438 26 HOH HOH . 
L 6 HOH A 39 439 4 HOH HOH . 
L 6 HOH A 40 440 10 HOH HOH . 
L 6 HOH A 41 441 59 HOH HOH . 
L 6 HOH A 42 442 24 HOH HOH . 
L 6 HOH A 43 443 14 HOH HOH . 
L 6 HOH A 44 444 79 HOH HOH . 
L 6 HOH A 45 445 34 HOH HOH . 
L 6 HOH A 46 446 149 HOH HOH . 
L 6 HOH A 47 447 25 HOH HOH . 
L 6 HOH A 48 448 2 HOH HOH . 
L 6 HOH A 49 449 148 HOH HOH . 
L 6 HOH A 50 450 47 HOH HOH . 
L 6 HOH A 51 451 54 HOH HOH . 
L 6 HOH A 52 452 113 HOH HOH . 
L 6 HOH A 53 453 1 HOH HOH . 
L 6 HOH A 54 454 19 HOH HOH . 
L 6 HOH A 55 455 48 HOH HOH . 
L 6 HOH A 56 456 49 HOH HOH . 
L 6 HOH A 57 457 60 HOH HOH . 
L 6 HOH A 58 458 57 HOH HOH . 
L 6 HOH A 59 459 16 HOH HOH . 
L 6 HOH A 60 460 32 HOH HOH . 
L 6 HOH A 61 461 39 HOH HOH . 
L 6 HOH A 62 462 3 HOH HOH . 
L 6 HOH A 63 463 8 HOH HOH . 
L 6 HOH A 64 464 7 HOH HOH . 
L 6 HOH A 65 465 109 HOH HOH . 
L 6 HOH A 66 466 40 HOH HOH . 
L 6 HOH A 67 467 139 HOH HOH . 
L 6 HOH A 68 468 56 HOH HOH . 
L 6 HOH A 69 469 33 HOH HOH . 
L 6 HOH A 70 470 100 HOH HOH . 
L 6 HOH A 71 471 106 HOH HOH . 
L 6 HOH A 72 472 45 HOH HOH . 
L 6 HOH A 73 473 63 HOH HOH . 
L 6 HOH A 74 474 44 HOH HOH . 
L 6 HOH A 75 475 126 HOH HOH . 
L 6 HOH A 76 476 29 HOH HOH . 
L 6 HOH A 77 477 74 HOH HOH . 
L 6 HOH A 78 478 22 HOH HOH . 
L 6 HOH A 79 479 88 HOH HOH . 
L 6 HOH A 80 480 72 HOH HOH . 
L 6 HOH A 81 481 116 HOH HOH . 
L 6 HOH A 82 482 23 HOH HOH . 
L 6 HOH A 83 483 28 HOH HOH . 
L 6 HOH A 84 484 93 HOH HOH . 
L 6 HOH A 85 485 84 HOH HOH . 
L 6 HOH A 86 486 120 HOH HOH . 
L 6 HOH A 87 487 83 HOH HOH . 
L 6 HOH A 88 488 97 HOH HOH . 
L 6 HOH A 89 489 78 HOH HOH . 
L 6 HOH A 90 490 36 HOH HOH . 
L 6 HOH A 91 491 136 HOH HOH . 
L 6 HOH A 92 492 137 HOH HOH . 
L 6 HOH A 93 493 151 HOH HOH . 
L 6 HOH A 94 494 110 HOH HOH . 
L 6 HOH A 95 495 64 HOH HOH . 
L 6 HOH A 96 496 18 HOH HOH . 
L 6 HOH A 97 497 141 HOH HOH . 
L 6 HOH A 98 498 51 HOH HOH . 
L 6 HOH A 99 499 81 HOH HOH . 
L 6 HOH A 100 500 138 HOH HOH . 
L 6 HOH A 101 501 144 HOH HOH . 
L 6 HOH A 102 502 123 HOH HOH . 
L 6 HOH A 103 503 95 HOH HOH . 
L 6 HOH A 104 504 80 HOH HOH . 
L 6 HOH A 105 505 65 HOH HOH . 
L 6 HOH A 106 506 82 HOH HOH . 
L 6 HOH A 107 507 38 HOH HOH . 
L 6 HOH A 108 508 71 HOH HOH . 
L 6 HOH A 109 509 96 HOH HOH . 
L 6 HOH A 110 510 75 HOH HOH . 
L 6 HOH A 111 511 142 HOH HOH . 
L 6 HOH A 112 512 135 HOH HOH . 
L 6 HOH A 113 513 133 HOH HOH . 
L 6 HOH A 114 514 58 HOH HOH . 
L 6 HOH A 115 515 89 HOH HOH . 
L 6 HOH A 116 516 50 HOH HOH . 
L 6 HOH A 117 517 132 HOH HOH . 
L 6 HOH A 118 518 125 HOH HOH . 
L 6 HOH A 119 519 122 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 65P . . . K 5 -50.239 -20.563 15.607 1 56.67 ? C13 65P 310 A 1 
HETATM 2 C C15 65P . . . K 5 -50.853 -21.115 14.493 1 59.79 ? C15 65P 310 A 1 
HETATM 3 C C17 65P . . . K 5 -50.811 -20.424 13.307 1 62.54 ? C17 65P 310 A 1 
HETATM 4 C C21 65P . . . K 5 -49.549 -18.663 14.315 1 55.96 ? C21 65P 310 A 1 
HETATM 5 C C28 65P . . . K 5 -45.663 -15.235 15.564 1 29.39 ? C28 65P 310 A 1 
HETATM 6 C C01 65P . . . K 5 -49.19 -13.548 15.726 1 31.37 ? C01 65P 310 A 1 
HETATM 7 C C05 65P . . . K 5 -48.07 -14.559 15.789 1 31.46 ? C05 65P 310 A 1 
HETATM 8 N N06 65P . . . K 5 -48.434 -15.817 16.095 1 32.46 ? N06 65P 310 A 1 
HETATM 9 C C07 65P . . . K 5 -47.478 -16.751 16.138 1 33.67 ? C07 65P 310 A 1 
HETATM 10 N N08 65P . . . K 5 -47.648 -18.083 16.434 1 38.02 ? N08 65P 310 A 1 
HETATM 11 C C09 65P . . . K 5 -48.914 -18.749 16.753 1 45.28 ? C09 65P 310 A 1 
HETATM 12 C C12 65P . . . K 5 -49.586 -19.338 15.536 1 52.52 ? C12 65P 310 A 1 
HETATM 13 F F18 65P . . . K 5 -51.399 -20.937 12.201 1 66.2 ? F18 65P 310 A 1 
HETATM 14 C C19 65P . . . K 5 -50.162 -19.221 13.221 1 60.79 ? C19 65P 310 A 1 
HETATM 15 F F20 65P . . . K 5 -50.126 -18.578 12.03 1 61.73 ? F20 65P 310 A 1 
HETATM 16 C C23 65P . . . K 5 -46.416 -18.696 16.325 1 36.39 ? C23 65P 310 A 1 
HETATM 17 C C25 65P . . . K 5 -45.46 -17.789 16.023 1 32.87 ? C25 65P 310 A 1 
HETATM 18 C C27 65P . . . K 5 -46.124 -16.524 15.94 1 32.4 ? C27 65P 310 A 1 
HETATM 19 C C29 65P . . . K 5 -44.191 -15.035 15.383 1 26.41 ? C29 65P 310 A 1 
HETATM 20 C C30 65P . . . K 5 -43.427 -14.827 16.538 1 25.36 ? C30 65P 310 A 1 
HETATM 21 C C32 65P . . . K 5 -42.061 -14.605 16.44 1 24.13 ? C32 65P 310 A 1 
HETATM 22 C C34 65P . . . K 5 -41.478 -14.497 15.186 1 23.77 ? C34 65P 310 A 1 
HETATM 23 O O35 65P . . . K 5 -40.124 -14.258 15.166 1 24.15 ? O35 65P 310 A 1 
HETATM 24 C C36 65P . . . K 5 -39.579 -13.863 13.896 1 25.43 ? C36 65P 310 A 1 
HETATM 25 C C39 65P . . . K 5 -40.028 -14.77 12.777 1 26.14 ? C39 65P 310 A 1 
HETATM 26 C C42 65P . . . K 5 -41.536 -14.718 12.654 1 25.08 ? C42 65P 310 A 1 
HETATM 27 C C45 65P . . . K 5 -42.217 -14.726 14.011 1 26.08 ? C45 65P 310 A 1 
HETATM 28 C C46 65P . . . K 5 -43.594 -14.986 14.1 1 27.39 ? C46 65P 310 A 1 
HETATM 29 C C47 65P . . . K 5 -44.4 -15.231 12.845 1 29.38 ? C47 65P 310 A 1 
HETATM 30 C C51 65P . . . K 5 -46.701 -14.27 15.495 1 27.62 ? C51 65P 310 A 1 
HETATM 31 C C52 65P . . . K 5 -46.233 -12.836 15.152 1 26.59 ? C52 65P 310 A 1 
HETATM 32 O O54 65P . . . K 5 -46.638 -11.888 16.162 1 27.17 ? O54 65P 310 A 1 
HETATM 33 C C55 65P . . . K 5 -46.001 -11.565 17.428 1 28.46 ? C55 65P 310 A 1 
HETATM 34 C C56 65P . . . K 5 -46.242 -12.704 18.393 1 26.06 ? C56 65P 310 A 1 
HETATM 35 C C60 65P . . . K 5 -46.718 -10.312 17.877 1 26.01 ? C60 65P 310 A 1 
HETATM 36 C C64 65P . . . K 5 -44.519 -11.308 17.236 1 28.92 ? C64 65P 310 A 1 
HETATM 37 C C68 65P . . . K 5 -46.693 -12.335 13.791 1 27.87 ? C68 65P 310 A 1 
HETATM 38 O O69 65P . . . K 5 -46.794 -11.152 13.539 1 27.06 ? O69 65P 310 A 1 
HETATM 39 O O71 65P . . . K 5 -47.011 -13.281 12.959 1 25.82 ? O71 65P 310 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           39 
#