data_5HRQ # _model_server_result.job_id 5H_iVQluYqJYOCY-nhcWcQ _model_server_result.datetime_utc '2025-01-10 11:27:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hrq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":101}' # _entry.id 5HRQ # _exptl.entry_id 5HRQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.82 _cell.angle_gamma 90 _cell.entry_id 5HRQ _cell.length_a 47.156 _cell.length_b 60.68 _cell.length_c 60.665 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HRQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 N N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 E SG CYS 6 E CYS 6 1_555 E SG CYS 11 E CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf8 E SG CYS 7 E CYS 7 1_555 F SG CYS 7 F CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? disulf ? disulf9 E SG CYS 20 E CYS 20 1_555 F SG CYS 19 F CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf10 G SG CYS 6 G CYS 6 1_555 G SG CYS 11 G CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf11 G SG CYS 7 G CYS 7 1_555 H SG CYS 7 H CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? disulf ? disulf12 G SG CYS 20 G CYS 20 1_555 H SG CYS 19 H CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf13 I SG CYS 6 I CYS 6 1_555 I SG CYS 11 I CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf14 I SG CYS 7 I CYS 7 1_555 J SG CYS 7 J CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf15 I SG CYS 20 I CYS 20 1_555 J SG CYS 19 J CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf16 K SG CYS 6 K CYS 6 1_555 K SG CYS 11 K CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? disulf ? disulf17 K SG CYS 7 K CYS 7 1_555 L SG CYS 7 L CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf18 K SG CYS 20 K CYS 20 1_555 L SG CYS 19 L CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 N ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 B C THR 27 B THR 27 1_555 B N HZP 28 B HZP 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 B C HZP 28 B HZP 28 1_555 B N LYS 29 B LYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? metalc ? metalc2 D NE2 HIS 10 D HIS 10 1_555 P ZN ZN . D ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? covale ? covale3 D C THR 27 D THR 27 1_555 D N HZP 28 D HZP 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale4 D C HZP 28 D HZP 28 1_555 D N LYS 29 D LYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc3 F NE2 HIS 10 F HIS 10 1_555 N ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? covale ? covale5 F C THR 27 F THR 27 1_555 F N HZP 28 F HZP 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale6 F C HZP 28 F HZP 28 1_555 F N LYS 29 F LYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? metalc ? metalc4 H NE2 HIS 10 H HIS 10 1_555 P ZN ZN . D ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? covale ? covale7 H C THR 27 H THR 27 1_555 H N HZP 28 H HZP 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale8 H C HZP 28 H HZP 28 1_555 H N LYS 29 H LYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? metalc ? metalc5 J NE2 HIS 10 J HIS 10 1_555 N ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? covale ? covale9 J C THR 27 J THR 27 1_555 J N HZP 28 J HZP 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale10 J C HZP 28 J HZP 28 1_555 J N LYS 29 J LYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? metalc ? metalc6 L NE2 HIS 10 L HIS 10 1_555 P ZN ZN . D ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? covale ? covale11 L C THR 27 L THR 27 1_555 L N HZP 28 L HZP 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? covale ? covale12 L C HZP 28 L HZP 28 1_555 L N LYS 29 L LYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5HRQ _atom_sites.fract_transf_matrix[1][1] 0.021206 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008063 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01648 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017635 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 IPH A 1 101 1 IPH IPH . N 4 ZN B 1 301 301 ZN ZN . O 3 IPH C 1 101 2 IPH IPH . P 4 ZN D 1 101 302 ZN ZN . Q 3 IPH E 1 101 3 IPH IPH . R 5 CL F 1 101 303 CL CL . S 3 IPH G 1 101 4 IPH IPH . T 5 CL H 1 101 304 CL CL . U 3 IPH I 1 101 5 IPH IPH . V 3 IPH K 1 101 6 IPH IPH . W 6 HOH A 1 201 11 HOH HOH . W 6 HOH A 2 202 119 HOH HOH . W 6 HOH A 3 203 2 HOH HOH . W 6 HOH A 4 204 1 HOH HOH . W 6 HOH A 5 205 5 HOH HOH . W 6 HOH A 6 206 6 HOH HOH . W 6 HOH A 7 207 7 HOH HOH . X 6 HOH B 1 401 140 HOH HOH . X 6 HOH B 2 402 132 HOH HOH . X 6 HOH B 3 403 109 HOH HOH . X 6 HOH B 4 404 99 HOH HOH . X 6 HOH B 5 405 112 HOH HOH . X 6 HOH B 6 406 10 HOH HOH . X 6 HOH B 7 407 9 HOH HOH . X 6 HOH B 8 408 28 HOH HOH . X 6 HOH B 9 409 4 HOH HOH . X 6 HOH B 10 410 102 HOH HOH . X 6 HOH B 11 411 13 HOH HOH . X 6 HOH B 12 412 165 HOH HOH . Y 6 HOH C 1 201 47 HOH HOH . Y 6 HOH C 2 202 48 HOH HOH . Y 6 HOH C 3 203 84 HOH HOH . Y 6 HOH C 4 204 49 HOH HOH . Y 6 HOH C 5 205 94 HOH HOH . Y 6 HOH C 6 206 144 HOH HOH . Y 6 HOH C 7 207 14 HOH HOH . Y 6 HOH C 8 208 92 HOH HOH . Y 6 HOH C 9 209 98 HOH HOH . Z 6 HOH D 1 201 162 HOH HOH . Z 6 HOH D 2 202 108 HOH HOH . Z 6 HOH D 3 203 161 HOH HOH . Z 6 HOH D 4 204 138 HOH HOH . Z 6 HOH D 5 205 114 HOH HOH . Z 6 HOH D 6 206 123 HOH HOH . Z 6 HOH D 7 207 51 HOH HOH . Z 6 HOH D 8 208 136 HOH HOH . Z 6 HOH D 9 209 89 HOH HOH . Z 6 HOH D 10 210 110 HOH HOH . Z 6 HOH D 11 211 157 HOH HOH . Z 6 HOH D 12 212 149 HOH HOH . Z 6 HOH D 13 213 96 HOH HOH . Z 6 HOH D 14 214 142 HOH HOH . Z 6 HOH D 15 215 50 HOH HOH . Z 6 HOH D 16 216 95 HOH HOH . Z 6 HOH D 17 217 97 HOH HOH . AA 6 HOH E 1 201 126 HOH HOH . AA 6 HOH E 2 202 116 HOH HOH . AA 6 HOH E 3 203 15 HOH HOH . AA 6 HOH E 4 204 127 HOH HOH . AA 6 HOH E 5 205 70 HOH HOH . AA 6 HOH E 6 206 53 HOH HOH . AA 6 HOH E 7 207 16 HOH HOH . AA 6 HOH E 8 208 75 HOH HOH . AA 6 HOH E 9 209 85 HOH HOH . AA 6 HOH E 10 210 128 HOH HOH . AA 6 HOH E 11 211 54 HOH HOH . AA 6 HOH E 12 212 55 HOH HOH . AA 6 HOH E 13 213 120 HOH HOH . AA 6 HOH E 14 214 52 HOH HOH . AA 6 HOH E 15 215 101 HOH HOH . BA 6 HOH F 1 201 57 HOH HOH . BA 6 HOH F 2 202 164 HOH HOH . BA 6 HOH F 3 203 59 HOH HOH . BA 6 HOH F 4 204 103 HOH HOH . BA 6 HOH F 5 205 34 HOH HOH . BA 6 HOH F 6 206 72 HOH HOH . BA 6 HOH F 7 207 107 HOH HOH . BA 6 HOH F 8 208 32 HOH HOH . BA 6 HOH F 9 209 73 HOH HOH . BA 6 HOH F 10 210 160 HOH HOH . BA 6 HOH F 11 211 60 HOH HOH . BA 6 HOH F 12 212 150 HOH HOH . BA 6 HOH F 13 213 93 HOH HOH . CA 6 HOH G 1 201 19 HOH HOH . CA 6 HOH G 2 202 36 HOH HOH . CA 6 HOH G 3 203 146 HOH HOH . CA 6 HOH G 4 204 76 HOH HOH . CA 6 HOH G 5 205 151 HOH HOH . CA 6 HOH G 6 206 27 HOH HOH . CA 6 HOH G 7 207 104 HOH HOH . CA 6 HOH G 8 208 82 HOH HOH . CA 6 HOH G 9 209 122 HOH HOH . CA 6 HOH G 10 210 124 HOH HOH . CA 6 HOH G 11 211 20 HOH HOH . CA 6 HOH G 12 212 117 HOH HOH . CA 6 HOH G 13 213 113 HOH HOH . CA 6 HOH G 14 214 148 HOH HOH . CA 6 HOH G 15 215 106 HOH HOH . CA 6 HOH G 16 216 80 HOH HOH . CA 6 HOH G 17 217 74 HOH HOH . DA 6 HOH H 1 201 21 HOH HOH . DA 6 HOH H 2 202 44 HOH HOH . DA 6 HOH H 3 203 23 HOH HOH . DA 6 HOH H 4 204 62 HOH HOH . DA 6 HOH H 5 205 90 HOH HOH . DA 6 HOH H 6 206 39 HOH HOH . DA 6 HOH H 7 207 18 HOH HOH . DA 6 HOH H 8 208 61 HOH HOH . DA 6 HOH H 9 209 152 HOH HOH . DA 6 HOH H 10 210 118 HOH HOH . DA 6 HOH H 11 211 22 HOH HOH . DA 6 HOH H 12 212 17 HOH HOH . DA 6 HOH H 13 213 42 HOH HOH . DA 6 HOH H 14 214 100 HOH HOH . DA 6 HOH H 15 215 141 HOH HOH . DA 6 HOH H 16 216 115 HOH HOH . DA 6 HOH H 17 217 156 HOH HOH . EA 6 HOH I 1 201 83 HOH HOH . EA 6 HOH I 2 202 131 HOH HOH . EA 6 HOH I 3 203 63 HOH HOH . EA 6 HOH I 4 204 65 HOH HOH . EA 6 HOH I 5 205 154 HOH HOH . EA 6 HOH I 6 206 12 HOH HOH . EA 6 HOH I 7 207 8 HOH HOH . EA 6 HOH I 8 208 88 HOH HOH . EA 6 HOH I 9 209 133 HOH HOH . EA 6 HOH I 10 210 137 HOH HOH . EA 6 HOH I 11 211 111 HOH HOH . EA 6 HOH I 12 212 64 HOH HOH . EA 6 HOH I 13 213 153 HOH HOH . EA 6 HOH I 14 214 37 HOH HOH . FA 6 HOH J 1 101 143 HOH HOH . FA 6 HOH J 2 102 158 HOH HOH . FA 6 HOH J 3 103 86 HOH HOH . FA 6 HOH J 4 104 25 HOH HOH . FA 6 HOH J 5 105 33 HOH HOH . FA 6 HOH J 6 106 24 HOH HOH . FA 6 HOH J 7 107 38 HOH HOH . FA 6 HOH J 8 108 79 HOH HOH . FA 6 HOH J 9 109 78 HOH HOH . FA 6 HOH J 10 110 163 HOH HOH . FA 6 HOH J 11 111 77 HOH HOH . FA 6 HOH J 12 112 66 HOH HOH . FA 6 HOH J 13 113 155 HOH HOH . GA 6 HOH K 1 201 130 HOH HOH . GA 6 HOH K 2 202 145 HOH HOH . GA 6 HOH K 3 203 40 HOH HOH . GA 6 HOH K 4 204 31 HOH HOH . GA 6 HOH K 5 205 91 HOH HOH . GA 6 HOH K 6 206 139 HOH HOH . GA 6 HOH K 7 207 147 HOH HOH . GA 6 HOH K 8 208 41 HOH HOH . GA 6 HOH K 9 209 26 HOH HOH . GA 6 HOH K 10 210 29 HOH HOH . GA 6 HOH K 11 211 105 HOH HOH . HA 6 HOH L 1 101 43 HOH HOH . HA 6 HOH L 2 102 135 HOH HOH . HA 6 HOH L 3 103 125 HOH HOH . HA 6 HOH L 4 104 87 HOH HOH . HA 6 HOH L 5 105 129 HOH HOH . HA 6 HOH L 6 106 159 HOH HOH . HA 6 HOH L 7 107 81 HOH HOH . HA 6 HOH L 8 108 68 HOH HOH . HA 6 HOH L 9 109 134 HOH HOH . HA 6 HOH L 10 110 71 HOH HOH . HA 6 HOH L 11 111 69 HOH HOH . HA 6 HOH L 12 112 35 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id P _atom_site.label_entity_id 4 _atom_site.Cartn_x -23.869 _atom_site.Cartn_y -6.552 _atom_site.Cartn_z 66.969 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 101 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #