data_5HSF # _model_server_result.job_id u5pfS94fSZPm3RHrN1XOkA _model_server_result.datetime_utc '2024-10-28 02:22:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hsf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 5HSF # _exptl.entry_id 5HSF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.64 _cell.angle_gamma 90 _cell.entry_id 5HSF _cell.length_a 47.713 _cell.length_b 43.88 _cell.length_c 49.579 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HSF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 A CYS 341 1_555 A SG CYS 88 A CYS 399 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.06 ? disulf ? disulf2 A SG CYS 30 A CYS 341 1_555 A SG CYS 88 A CYS 399 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.053 ? disulf ? disulf3 B SG CYS 30 B CYS 341 1_555 B SG CYS 88 B CYS 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 237 n n C1 C2 PGE sing 238 n n C1 H1 PGE sing 239 n n C1 H12 PGE sing 240 n n O1 HO1 PGE sing 241 n n C2 O2 PGE sing 242 n n C2 H2 PGE sing 243 n n C2 H22 PGE sing 244 n n O2 C3 PGE sing 245 n n C3 C4 PGE sing 246 n n C3 H3 PGE sing 247 n n C3 H32 PGE sing 248 n n C4 O3 PGE sing 249 n n C4 H4 PGE sing 250 n n C4 H42 PGE sing 251 n n O4 C6 PGE sing 252 n n O4 HO4 PGE sing 253 n n C6 C5 PGE sing 254 n n C6 H6 PGE sing 255 n n C6 H62 PGE sing 256 n n C5 O3 PGE sing 257 n n C5 H5 PGE sing 258 n n C5 H52 PGE sing 259 n n # _atom_sites.entry_id 5HSF _atom_sites.fract_transf_matrix[1][1] 0.020959 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000967 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022789 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020191 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGE A 1 501 2 PGE PGE . D 2 PGE B 1 501 1 PGE PEG . E 3 HOH A 1 601 56 HOH HOH . E 3 HOH A 2 602 64 HOH HOH . E 3 HOH A 3 603 30 HOH HOH . E 3 HOH A 4 604 94 HOH HOH . E 3 HOH A 5 605 116 HOH HOH . E 3 HOH A 6 606 42 HOH HOH . E 3 HOH A 7 607 134 HOH HOH . E 3 HOH A 8 608 7 HOH HOH . E 3 HOH A 9 609 46 HOH HOH . E 3 HOH A 10 610 83 HOH HOH . E 3 HOH A 11 611 135 HOH HOH . E 3 HOH A 12 612 4 HOH HOH . E 3 HOH A 13 613 26 HOH HOH . E 3 HOH A 14 614 146 HOH HOH . E 3 HOH A 15 615 114 HOH HOH . E 3 HOH A 16 616 17 HOH HOH . E 3 HOH A 17 617 50 HOH HOH . E 3 HOH A 18 618 111 HOH HOH . E 3 HOH A 19 619 57 HOH HOH . E 3 HOH A 20 620 99 HOH HOH . E 3 HOH A 21 621 13 HOH HOH . E 3 HOH A 22 622 112 HOH HOH . E 3 HOH A 23 623 11 HOH HOH . E 3 HOH A 24 624 89 HOH HOH . E 3 HOH A 25 625 3 HOH HOH . E 3 HOH A 26 626 32 HOH HOH . E 3 HOH A 27 627 86 HOH HOH . E 3 HOH A 28 628 133 HOH HOH . E 3 HOH A 29 629 40 HOH HOH . E 3 HOH A 30 630 29 HOH HOH . E 3 HOH A 31 631 25 HOH HOH . E 3 HOH A 32 632 68 HOH HOH . E 3 HOH A 33 633 147 HOH HOH . E 3 HOH A 34 634 12 HOH HOH . E 3 HOH A 35 635 8 HOH HOH . E 3 HOH A 36 636 23 HOH HOH . E 3 HOH A 37 637 113 HOH HOH . E 3 HOH A 38 638 36 HOH HOH . E 3 HOH A 39 639 110 HOH HOH . E 3 HOH A 40 640 85 HOH HOH . E 3 HOH A 41 641 52 HOH HOH . E 3 HOH A 42 642 131 HOH HOH . E 3 HOH A 43 643 82 HOH HOH . E 3 HOH A 44 644 63 HOH HOH . E 3 HOH A 45 645 59 HOH HOH . E 3 HOH A 46 646 19 HOH HOH . E 3 HOH A 47 647 144 HOH HOH . E 3 HOH A 48 648 159 HOH HOH . E 3 HOH A 49 649 96 HOH HOH . E 3 HOH A 50 650 45 HOH HOH . E 3 HOH A 51 651 44 HOH HOH . E 3 HOH A 52 652 130 HOH HOH . E 3 HOH A 53 653 24 HOH HOH . E 3 HOH A 54 654 73 HOH HOH . E 3 HOH A 55 655 91 HOH HOH . E 3 HOH A 56 656 108 HOH HOH . E 3 HOH A 57 657 145 HOH HOH . E 3 HOH A 58 658 92 HOH HOH . E 3 HOH A 59 659 123 HOH HOH . E 3 HOH A 60 660 79 HOH HOH . E 3 HOH A 61 661 72 HOH HOH . E 3 HOH A 62 662 97 HOH HOH . E 3 HOH A 63 663 70 HOH HOH . E 3 HOH A 64 664 28 HOH HOH . E 3 HOH A 65 665 53 HOH HOH . E 3 HOH A 66 666 43 HOH HOH . E 3 HOH A 67 667 151 HOH HOH . E 3 HOH A 68 668 132 HOH HOH . E 3 HOH A 69 669 102 HOH HOH . E 3 HOH A 70 670 95 HOH HOH . E 3 HOH A 71 671 107 HOH HOH . E 3 HOH A 72 672 155 HOH HOH . E 3 HOH A 73 673 100 HOH HOH . E 3 HOH A 74 674 120 HOH HOH . E 3 HOH A 75 675 65 HOH HOH . E 3 HOH A 76 676 124 HOH HOH . E 3 HOH A 77 677 127 HOH HOH . E 3 HOH A 78 678 101 HOH HOH . E 3 HOH A 79 679 106 HOH HOH . E 3 HOH A 80 680 69 HOH HOH . E 3 HOH A 81 681 90 HOH HOH . F 3 HOH B 1 601 122 HOH HOH . F 3 HOH B 2 602 20 HOH HOH . F 3 HOH B 3 603 55 HOH HOH . F 3 HOH B 4 604 87 HOH HOH . F 3 HOH B 5 605 76 HOH HOH . F 3 HOH B 6 606 31 HOH HOH . F 3 HOH B 7 607 54 HOH HOH . F 3 HOH B 8 608 21 HOH HOH . F 3 HOH B 9 609 33 HOH HOH . F 3 HOH B 10 610 37 HOH HOH . F 3 HOH B 11 611 105 HOH HOH . F 3 HOH B 12 612 161 HOH HOH . F 3 HOH B 13 613 5 HOH HOH . F 3 HOH B 14 614 60 HOH HOH . F 3 HOH B 15 615 104 HOH HOH . F 3 HOH B 16 616 9 HOH HOH . F 3 HOH B 17 617 141 HOH HOH . F 3 HOH B 18 618 61 HOH HOH . F 3 HOH B 19 619 14 HOH HOH . F 3 HOH B 20 620 157 HOH HOH . F 3 HOH B 21 621 15 HOH HOH . F 3 HOH B 22 622 62 HOH HOH . F 3 HOH B 23 623 88 HOH HOH . F 3 HOH B 24 624 10 HOH HOH . F 3 HOH B 25 625 6 HOH HOH . F 3 HOH B 26 626 153 HOH HOH . F 3 HOH B 27 627 51 HOH HOH . F 3 HOH B 28 628 115 HOH HOH . F 3 HOH B 29 629 39 HOH HOH . F 3 HOH B 30 630 66 HOH HOH . F 3 HOH B 31 631 121 HOH HOH . F 3 HOH B 32 632 139 HOH HOH . F 3 HOH B 33 633 34 HOH HOH . F 3 HOH B 34 634 41 HOH HOH . F 3 HOH B 35 635 38 HOH HOH . F 3 HOH B 36 636 93 HOH HOH . F 3 HOH B 37 637 118 HOH HOH . F 3 HOH B 38 638 143 HOH HOH . F 3 HOH B 39 639 58 HOH HOH . F 3 HOH B 40 640 47 HOH HOH . F 3 HOH B 41 641 98 HOH HOH . F 3 HOH B 42 642 18 HOH HOH . F 3 HOH B 43 643 35 HOH HOH . F 3 HOH B 44 644 16 HOH HOH . F 3 HOH B 45 645 77 HOH HOH . F 3 HOH B 46 646 1 HOH HOH . F 3 HOH B 47 647 149 HOH HOH . F 3 HOH B 48 648 78 HOH HOH . F 3 HOH B 49 649 67 HOH HOH . F 3 HOH B 50 650 140 HOH HOH . F 3 HOH B 51 651 27 HOH HOH . F 3 HOH B 52 652 71 HOH HOH . F 3 HOH B 53 653 148 HOH HOH . F 3 HOH B 54 654 22 HOH HOH . F 3 HOH B 55 655 158 HOH HOH . F 3 HOH B 56 656 154 HOH HOH . F 3 HOH B 57 657 48 HOH HOH . F 3 HOH B 58 658 75 HOH HOH . F 3 HOH B 59 659 49 HOH HOH . F 3 HOH B 60 660 119 HOH HOH . F 3 HOH B 61 661 160 HOH HOH . F 3 HOH B 62 662 152 HOH HOH . F 3 HOH B 63 663 138 HOH HOH . F 3 HOH B 64 664 84 HOH HOH . F 3 HOH B 65 665 137 HOH HOH . F 3 HOH B 66 666 117 HOH HOH . F 3 HOH B 67 667 103 HOH HOH . F 3 HOH B 68 668 150 HOH HOH . F 3 HOH B 69 669 128 HOH HOH . F 3 HOH B 70 671 136 HOH HOH . F 3 HOH B 71 672 81 HOH HOH . F 3 HOH B 72 673 129 HOH HOH . F 3 HOH B 73 674 162 HOH HOH . F 3 HOH B 74 675 142 HOH HOH . F 3 HOH B 75 676 80 HOH HOH . F 3 HOH B 76 677 74 HOH HOH . F 3 HOH B 77 678 125 HOH HOH . F 3 HOH B 78 679 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . D 2 -5.096 19.103 -28.752 1 54.66 ? C1 PGE 501 B 1 HETATM 2 O O1 PGE . . . D 2 -5.268 17.883 -29.479 1 63.67 ? O1 PGE 501 B 1 HETATM 3 C C2 PGE . . . D 2 -6.453 19.597 -28.274 1 53.24 ? C2 PGE 501 B 1 HETATM 4 O O2 PGE . . . D 2 -6.99 20.533 -29.21 1 53.77 ? O2 PGE 501 B 1 HETATM 5 C C3 PGE . . . D 2 -6.677 21.892 -28.912 1 52.97 ? C3 PGE 501 B 1 HETATM 6 C C4 PGE . . . D 2 -6.981 22.764 -30.124 1 56.56 ? C4 PGE 501 B 1 HETATM 7 O O3 PGE . . . D 2 -7.086 24.133 -29.721 1 61.96 ? O3 PGE 501 B 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #