data_5HSU # _model_server_result.job_id -RjXulPVTH1wJiFxq3zf5A _model_server_result.datetime_utc '2024-11-22 22:10:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hsu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5HSU # _exptl.entry_id 5HSU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5HSU _cell.length_a 86.14 _cell.length_b 86.14 _cell.length_c 76.245 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HSU _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 270 n n PA O2A NDP sing 271 n n PA O5B NDP sing 272 n n PA O3 NDP sing 273 n n O2A HOA2 NDP sing 274 n n O5B C5B NDP sing 275 n n C5B C4B NDP sing 276 n n C5B H51A NDP sing 277 n n C5B H52A NDP sing 278 n n C4B O4B NDP sing 279 n n C4B C3B NDP sing 280 n n C4B H4B NDP sing 281 n n O4B C1B NDP sing 282 n n C3B O3B NDP sing 283 n n C3B C2B NDP sing 284 n n C3B H3B NDP sing 285 n n O3B HO3A NDP sing 286 n n C2B O2B NDP sing 287 n n C2B C1B NDP sing 288 n n C2B H2B NDP sing 289 n n O2B P2B NDP sing 290 n n C1B N9A NDP sing 291 n n C1B H1B NDP sing 292 n n N9A C8A NDP sing 293 n y N9A C4A NDP sing 294 n y C8A N7A NDP doub 295 n y C8A H8A NDP sing 296 n n N7A C5A NDP sing 297 n y C5A C6A NDP sing 298 n y C5A C4A NDP doub 299 n y C6A N6A NDP sing 300 n n C6A N1A NDP doub 301 n y N6A H61A NDP sing 302 n n N6A H62A NDP sing 303 n n N1A C2A NDP sing 304 n y C2A N3A NDP doub 305 n y C2A H2A NDP sing 306 n n N3A C4A NDP sing 307 n y O3 PN NDP sing 308 n n PN O1N NDP doub 309 n n PN O2N NDP sing 310 n n PN O5D NDP sing 311 n n O2N H21N NDP sing 312 n n O5D C5D NDP sing 313 n n C5D C4D NDP sing 314 n n C5D H51N NDP sing 315 n n C5D H52N NDP sing 316 n n C4D O4D NDP sing 317 n n C4D C3D NDP sing 318 n n C4D H4D NDP sing 319 n n O4D C1D NDP sing 320 n n C3D O3D NDP sing 321 n n C3D C2D NDP sing 322 n n C3D H3D NDP sing 323 n n O3D HO3N NDP sing 324 n n C2D O2D NDP sing 325 n n C2D C1D NDP sing 326 n n C2D H2D NDP sing 327 n n O2D HO2N NDP sing 328 n n C1D N1N NDP sing 329 n n C1D H1D NDP sing 330 n n N1N C2N NDP sing 331 n n N1N C6N NDP sing 332 n n C2N C3N NDP doub 333 n n C2N H2N NDP sing 334 n n C3N C7N NDP sing 335 n n C3N C4N NDP sing 336 n n C7N O7N NDP doub 337 n n C7N N7N NDP sing 338 n n N7N H71N NDP sing 339 n n N7N H72N NDP sing 340 n n C4N C5N NDP sing 341 n n C4N H41N NDP sing 342 n n C4N H42N NDP sing 343 n n C5N C6N NDP doub 344 n n C5N H5N NDP sing 345 n n C6N H6N NDP sing 346 n n P2B O1X NDP doub 347 n n P2B O2X NDP sing 348 n n P2B O3X NDP sing 349 n n O2X HOP2 NDP sing 350 n n O3X HOP3 NDP sing 351 n n # _atom_sites.entry_id 5HSU _atom_sites.fract_transf_matrix[1][1] 0.011609 _atom_sites.fract_transf_matrix[1][2] 0.006702 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013405 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013116 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP A 1 201 1 NDP NDP . C 3 63Y A 1 202 2 63Y DRG . D 4 HOH A 1 301 48 HOH HOH . D 4 HOH A 2 302 36 HOH HOH . D 4 HOH A 3 303 17 HOH HOH . D 4 HOH A 4 304 46 HOH HOH . D 4 HOH A 5 305 14 HOH HOH . D 4 HOH A 6 306 27 HOH HOH . D 4 HOH A 7 307 26 HOH HOH . D 4 HOH A 8 308 50 HOH HOH . D 4 HOH A 9 309 4 HOH HOH . D 4 HOH A 10 310 11 HOH HOH . D 4 HOH A 11 311 21 HOH HOH . D 4 HOH A 12 312 38 HOH HOH . D 4 HOH A 13 313 20 HOH HOH . D 4 HOH A 14 314 28 HOH HOH . D 4 HOH A 15 315 39 HOH HOH . D 4 HOH A 16 316 32 HOH HOH . D 4 HOH A 17 317 25 HOH HOH . D 4 HOH A 18 318 2 HOH HOH . D 4 HOH A 19 319 3 HOH HOH . D 4 HOH A 20 320 18 HOH HOH . D 4 HOH A 21 321 40 HOH HOH . D 4 HOH A 22 322 12 HOH HOH . D 4 HOH A 23 323 5 HOH HOH . D 4 HOH A 24 324 6 HOH HOH . D 4 HOH A 25 325 8 HOH HOH . D 4 HOH A 26 326 1 HOH HOH . D 4 HOH A 27 327 13 HOH HOH . D 4 HOH A 28 328 10 HOH HOH . D 4 HOH A 29 329 42 HOH HOH . D 4 HOH A 30 330 15 HOH HOH . D 4 HOH A 31 331 23 HOH HOH . D 4 HOH A 32 332 44 HOH HOH . D 4 HOH A 33 333 35 HOH HOH . D 4 HOH A 34 334 9 HOH HOH . D 4 HOH A 35 335 45 HOH HOH . D 4 HOH A 36 336 19 HOH HOH . D 4 HOH A 37 337 37 HOH HOH . D 4 HOH A 38 338 24 HOH HOH . D 4 HOH A 39 339 49 HOH HOH . D 4 HOH A 40 340 29 HOH HOH . D 4 HOH A 41 341 30 HOH HOH . D 4 HOH A 42 342 43 HOH HOH . D 4 HOH A 43 343 41 HOH HOH . D 4 HOH A 44 344 33 HOH HOH . D 4 HOH A 45 345 47 HOH HOH . D 4 HOH A 46 346 22 HOH HOH . D 4 HOH A 47 347 16 HOH HOH . D 4 HOH A 48 348 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . B 2 26.433 8.487 9.721 1 21.84 ? PA NDP 201 A 1 HETATM 2 O O1A NDP . . . B 2 25.148 7.802 9.537 1 22.85 ? O1A NDP 201 A 1 HETATM 3 O O2A NDP . . . B 2 26.687 9.701 9.089 1 19.91 ? O2A NDP 201 A 1 HETATM 4 O O5B NDP . . . B 2 26.697 8.655 11.303 1 23.43 ? O5B NDP 201 A 1 HETATM 5 C C5B NDP . . . B 2 26.309 7.614 12.18 1 20.32 ? C5B NDP 201 A 1 HETATM 6 C C4B NDP . . . B 2 25.945 8.293 13.497 1 25.82 ? C4B NDP 201 A 1 HETATM 7 O O4B NDP . . . B 2 24.964 9.297 13.245 1 25.96 ? O4B NDP 201 A 1 HETATM 8 C C3B NDP . . . B 2 25.378 7.297 14.46 1 24.39 ? C3B NDP 201 A 1 HETATM 9 O O3B NDP . . . B 2 26.366 6.651 15.231 1 28.91 ? O3B NDP 201 A 1 HETATM 10 C C2B NDP . . . B 2 24.439 8.166 15.342 1 23.25 ? C2B NDP 201 A 1 HETATM 11 O O2B NDP . . . B 2 25.271 8.927 16.206 1 27.06 ? O2B NDP 201 A 1 HETATM 12 C C1B NDP . . . B 2 23.904 9.226 14.312 1 23.33 ? C1B NDP 201 A 1 HETATM 13 N N9A NDP . . . B 2 22.779 8.718 13.41 1 25.09 ? N9A NDP 201 A 1 HETATM 14 C C8A NDP . . . B 2 22.613 8.058 12.249 1 26.51 ? C8A NDP 201 A 1 HETATM 15 N N7A NDP . . . B 2 21.304 7.961 11.969 1 27.98 ? N7A NDP 201 A 1 HETATM 16 C C5A NDP . . . B 2 20.643 8.538 12.981 1 27.73 ? C5A NDP 201 A 1 HETATM 17 C C6A NDP . . . B 2 19.29 8.633 13.249 1 29.48 ? C6A NDP 201 A 1 HETATM 18 N N6A NDP . . . B 2 18.361 8.216 12.35 1 30.96 ? N6A NDP 201 A 1 HETATM 19 N N1A NDP . . . B 2 18.929 9.259 14.349 1 28.66 ? N1A NDP 201 A 1 HETATM 20 C C2A NDP . . . B 2 19.875 9.754 15.276 1 29.51 ? C2A NDP 201 A 1 HETATM 21 N N3A NDP . . . B 2 21.242 9.624 15.058 1 29.7 ? N3A NDP 201 A 1 HETATM 22 C C4A NDP . . . B 2 21.561 8.955 13.911 1 30.01 ? C4A NDP 201 A 1 HETATM 23 O O3 NDP . . . B 2 27.517 7.321 9.479 1 23.18 ? O3 NDP 201 A 1 HETATM 24 P PN NDP . . . B 2 28.038 6.168 8.542 1 22.99 ? PN NDP 201 A 1 HETATM 25 O O1N NDP . . . B 2 27.002 5.56 7.726 1 22.21 ? O1N NDP 201 A 1 HETATM 26 O O2N NDP . . . B 2 28.742 5.326 9.503 1 30.96 ? O2N NDP 201 A 1 HETATM 27 O O5D NDP . . . B 2 29.146 6.677 7.677 1 29.98 ? O5D NDP 201 A 1 HETATM 28 C C5D NDP . . . B 2 29.13 7.58 6.747 1 26.03 ? C5D NDP 201 A 1 HETATM 29 C C4D NDP . . . B 2 30.433 7.123 5.891 1 23.32 ? C4D NDP 201 A 1 HETATM 30 O O4D NDP . . . B 2 30.194 7.382 4.516 1 21.73 ? O4D NDP 201 A 1 HETATM 31 C C3D NDP . . . B 2 31.749 7.954 6.185 1 21.3 ? C3D NDP 201 A 1 HETATM 32 O O3D NDP . . . B 2 32.968 7.3 5.662 1 23.55 ? O3D NDP 201 A 1 HETATM 33 C C2D NDP . . . B 2 31.474 9.087 5.228 1 20.48 ? C2D NDP 201 A 1 HETATM 34 O O2D NDP . . . B 2 32.581 9.808 4.795 1 25.28 ? O2D NDP 201 A 1 HETATM 35 C C1D NDP . . . B 2 30.824 8.436 4.017 1 21.87 ? C1D NDP 201 A 1 HETATM 36 N N1N NDP . . . B 2 29.786 9.159 3.318 1 22.63 ? N1N NDP 201 A 1 HETATM 37 C C2N NDP . . . B 2 29.759 9.018 1.907 1 22.21 ? C2N NDP 201 A 1 HETATM 38 C C3N NDP . . . B 2 28.742 9.51 1.126 1 24.13 ? C3N NDP 201 A 1 HETATM 39 C C7N NDP . . . B 2 28.72 9.299 -0.25 1 23.63 ? C7N NDP 201 A 1 HETATM 40 O O7N NDP . . . B 2 27.722 9.681 -0.901 1 22.23 ? O7N NDP 201 A 1 HETATM 41 N N7N NDP . . . B 2 29.636 8.417 -0.822 1 21.58 ? N7N NDP 201 A 1 HETATM 42 C C4N NDP . . . B 2 27.658 10.182 1.805 1 25.42 ? C4N NDP 201 A 1 HETATM 43 C C5N NDP . . . B 2 27.723 10.365 3.257 1 24.26 ? C5N NDP 201 A 1 HETATM 44 C C6N NDP . . . B 2 28.711 9.799 4.072 1 23.79 ? C6N NDP 201 A 1 HETATM 45 P P2B NDP . . . B 2 25.073 8.87 17.762 1 26.04 ? P2B NDP 201 A 1 HETATM 46 O O1X NDP . . . B 2 23.604 8.661 18.093 1 26.94 ? O1X NDP 201 A 1 HETATM 47 O O2X NDP . . . B 2 25.81 7.635 18.119 1 25.68 ? O2X NDP 201 A 1 HETATM 48 O O3X NDP . . . B 2 25.796 10.052 18.292 1 22.33 ? O3X NDP 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 48 #