data_5HT4 # _model_server_result.job_id IB5cBwaMZ67LIQpzQnls5w _model_server_result.datetime_utc '2024-11-22 22:05:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ht4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 5HT4 # _exptl.entry_id 5HT4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5HT4 _cell.length_a 85.68 _cell.length_b 85.68 _cell.length_c 77.026 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HT4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C PA NDP . A NDP 202 1_555 D O3 SO4 . A SO4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.575 ? covale ? covale2 C PA NDP . A NDP 202 1_555 D O4 SO4 . A SO4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.551 ? covale ? covale3 C O1A NDP . A NDP 202 1_555 D S SO4 . A SO4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.726 ? covale ? covale4 C O5B NDP . A NDP 202 1_555 D S SO4 . A SO4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.626 ? covale ? covale5 C O2B NDP . A NDP 202 1_555 E S SO4 . A SO4 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale6 C P2B NDP . A NDP 202 1_555 E O2 SO4 . A SO4 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 416 n n S O2 SO4 doub 417 n n S O3 SO4 sing 418 n n S O4 SO4 sing 419 n n # _atom_sites.entry_id 5HT4 _atom_sites.fract_transf_matrix[1][1] 0.011671 _atom_sites.fract_transf_matrix[1][2] 0.006738 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013477 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012983 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 65J A 1 201 1 65J DRG . C 3 NDP A 1 202 1 NDP NDP . D 4 SO4 A 1 203 1 SO4 SO4 . E 4 SO4 A 1 204 2 SO4 SO4 . F 5 HOH A 1 301 24 HOH HOH . F 5 HOH A 2 302 69 HOH HOH . F 5 HOH A 3 303 34 HOH HOH . F 5 HOH A 4 304 38 HOH HOH . F 5 HOH A 5 305 56 HOH HOH . F 5 HOH A 6 306 64 HOH HOH . F 5 HOH A 7 307 58 HOH HOH . F 5 HOH A 8 308 76 HOH HOH . F 5 HOH A 9 309 17 HOH HOH . F 5 HOH A 10 310 59 HOH HOH . F 5 HOH A 11 311 44 HOH HOH . F 5 HOH A 12 312 25 HOH HOH . F 5 HOH A 13 313 74 HOH HOH . F 5 HOH A 14 314 5 HOH HOH . F 5 HOH A 15 315 65 HOH HOH . F 5 HOH A 16 316 72 HOH HOH . F 5 HOH A 17 317 78 HOH HOH . F 5 HOH A 18 318 61 HOH HOH . F 5 HOH A 19 319 70 HOH HOH . F 5 HOH A 20 320 51 HOH HOH . F 5 HOH A 21 321 42 HOH HOH . F 5 HOH A 22 322 41 HOH HOH . F 5 HOH A 23 323 52 HOH HOH . F 5 HOH A 24 324 6 HOH HOH . F 5 HOH A 25 325 57 HOH HOH . F 5 HOH A 26 326 37 HOH HOH . F 5 HOH A 27 327 22 HOH HOH . F 5 HOH A 28 328 11 HOH HOH . F 5 HOH A 29 329 29 HOH HOH . F 5 HOH A 30 330 4 HOH HOH . F 5 HOH A 31 331 40 HOH HOH . F 5 HOH A 32 332 31 HOH HOH . F 5 HOH A 33 333 12 HOH HOH . F 5 HOH A 34 334 77 HOH HOH . F 5 HOH A 35 335 43 HOH HOH . F 5 HOH A 36 336 9 HOH HOH . F 5 HOH A 37 337 3 HOH HOH . F 5 HOH A 38 338 62 HOH HOH . F 5 HOH A 39 339 15 HOH HOH . F 5 HOH A 40 340 46 HOH HOH . F 5 HOH A 41 341 21 HOH HOH . F 5 HOH A 42 342 16 HOH HOH . F 5 HOH A 43 343 48 HOH HOH . F 5 HOH A 44 344 13 HOH HOH . F 5 HOH A 45 345 18 HOH HOH . F 5 HOH A 46 346 23 HOH HOH . F 5 HOH A 47 347 1 HOH HOH . F 5 HOH A 48 348 19 HOH HOH . F 5 HOH A 49 349 35 HOH HOH . F 5 HOH A 50 350 27 HOH HOH . F 5 HOH A 51 351 14 HOH HOH . F 5 HOH A 52 352 63 HOH HOH . F 5 HOH A 53 353 8 HOH HOH . F 5 HOH A 54 354 50 HOH HOH . F 5 HOH A 55 355 30 HOH HOH . F 5 HOH A 56 356 36 HOH HOH . F 5 HOH A 57 357 39 HOH HOH . F 5 HOH A 58 358 66 HOH HOH . F 5 HOH A 59 359 28 HOH HOH . F 5 HOH A 60 360 7 HOH HOH . F 5 HOH A 61 361 2 HOH HOH . F 5 HOH A 62 362 26 HOH HOH . F 5 HOH A 63 363 54 HOH HOH . F 5 HOH A 64 364 47 HOH HOH . F 5 HOH A 65 365 45 HOH HOH . F 5 HOH A 66 366 20 HOH HOH . F 5 HOH A 67 367 60 HOH HOH . F 5 HOH A 68 368 73 HOH HOH . F 5 HOH A 69 369 68 HOH HOH . F 5 HOH A 70 370 75 HOH HOH . F 5 HOH A 71 371 53 HOH HOH . F 5 HOH A 72 372 67 HOH HOH . F 5 HOH A 73 373 49 HOH HOH . F 5 HOH A 74 374 33 HOH HOH . F 5 HOH A 75 375 55 HOH HOH . F 5 HOH A 76 376 71 HOH HOH . F 5 HOH A 77 377 32 HOH HOH . F 5 HOH A 78 378 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 4 -5.699 22.673 9.883 0.5 15.93 ? S SO4 203 A 1 HETATM 2 O O1 SO4 . . . D 4 -4.852 21.725 9.179 0.5 13.79 ? O1 SO4 203 A 1 HETATM 3 O O2 SO4 . . . D 4 -7.135 22.621 9.431 0.5 14.79 ? O2 SO4 203 A 1 HETATM 4 O O3 SO4 . . . D 4 -5.72 22.345 11.328 0.5 14.25 ? O3 SO4 203 A 1 HETATM 5 O O4 SO4 . . . D 4 -5.281 24.047 9.673 0.5 15.18 ? O4 SO4 203 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #