data_5HU6
#
_model_server_result.job_id            bK5OinjtG9VPxbQ45e-8sA 
_model_server_result.datetime_utc      '2024-12-02 11:54:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5hu6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":201}' 
#
_entry.id    5HU6 
#
_exptl.entry_id    5HU6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.97 
_cell.angle_gamma         90 
_cell.entry_id            5HU6 
_cell.length_a            222.29 
_cell.length_b            56.56 
_cell.length_c            66.1 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5HU6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 C SG CYS 2 C CYS 149 1_555 C SG CYS 119 C CYS 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? 
disulf ? disulf2 C SG CYS 162 C CYS 309 1_555 C SG CYS 193 C CYS 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
disulf ? disulf3 C SG CYS 204 C CYS 351 1_555 C SG CYS 234 C CYS 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
disulf ? disulf4 D SG CYS 12 D CYS 49 1_555 D SG CYS 160 D CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? 
covale ? covale1 C ND2 ASN 37 C ASN 184 1_555 I C1 NAG . C NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
covale ? covale2 C ND2 ASN 94 C ASN 241 1_555 J C1 NAG . C NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
metalc ? metalc1 A NE2 HIS 87 A HIS 88 1_555 E FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc2 E FE HEM . A HEM 201 1_555 F O1 OXY . A OXY 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc3 B NE2 HIS 91 B HIS 93 1_555 G FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc4 G FE HEM . B HEM 201 1_555 H O1 OXY . B OXY 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     5HU6 
_atom_sites.fract_transf_matrix[1][1]    0.004499 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000233 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01768 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015149 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 HEM A 1 201 143 HEM HEM . 
F 6 OXY A 1 202 144 OXY O2 . 
G 5 HEM B 1 201 144 HEM HEM . 
H 6 OXY B 1 202 145 OXY O2 . 
I 7 NAG C 1 501 407 NAG NAG . 
J 7 NAG C 1 502 408 NAG NAG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . G 5 32.276 13.081 24.659 1 58.91 ? CHA HEM 201 B 1 
HETATM 2 C CHB HEM . . . G 5 37.01 12.739 23.807 1 61.99 ? CHB HEM 201 B 1 
HETATM 3 C CHC HEM . . . G 5 36.717 16.541 20.825 1 52.2 ? CHC HEM 201 B 1 
HETATM 4 C CHD HEM . . . G 5 32.123 17.256 22.265 1 48.31 ? CHD HEM 201 B 1 
HETATM 5 C C1A HEM . . . G 5 33.581 12.632 24.56 1 63.33 ? C1A HEM 201 B 1 
HETATM 6 C C2A HEM . . . G 5 34.025 11.436 25.202 1 64.5 ? C2A HEM 201 B 1 
HETATM 7 C C3A HEM . . . G 5 35.358 11.338 24.935 1 65.46 ? C3A HEM 201 B 1 
HETATM 8 C C4A HEM . . . G 5 35.714 12.472 24.174 1 61.95 ? C4A HEM 201 B 1 
HETATM 9 C CMA HEM . . . G 5 36.288 10.21 25.327 1 70.17 ? CMA HEM 201 B 1 
HETATM 10 C CAA HEM . . . G 5 33.153 10.33 25.759 1 66.03 ? CAA HEM 201 B 1 
HETATM 11 C CBA HEM . . . G 5 32.769 10.41 27.233 1 70.16 ? CBA HEM 201 B 1 
HETATM 12 C CGA HEM . . . G 5 31.521 9.567 27.452 1 74.83 ? CGA HEM 201 B 1 
HETATM 13 O O1A HEM . . . G 5 30.392 10.098 27.328 1 76.06 ? O1A HEM 201 B 1 
HETATM 14 O O2A HEM . . . G 5 31.592 8.348 27.756 1 76.08 ? O2A HEM 201 B 1 
HETATM 15 C C1B HEM . . . G 5 37.297 13.695 22.823 1 59.36 ? C1B HEM 201 B 1 
HETATM 16 C C2B HEM . . . G 5 38.601 13.822 22.259 1 59.54 ? C2B HEM 201 B 1 
HETATM 17 C C3B HEM . . . G 5 38.571 14.89 21.409 1 56.72 ? C3B HEM 201 B 1 
HETATM 18 C C4B HEM . . . G 5 37.163 15.394 21.472 1 53.12 ? C4B HEM 201 B 1 
HETATM 19 C CMB HEM . . . G 5 39.788 12.911 22.508 1 60.92 ? CMB HEM 201 B 1 
HETATM 20 C CAB HEM . . . G 5 39.749 15.387 20.633 1 56.17 ? CAB HEM 201 B 1 
HETATM 21 C CBB HEM . . . G 5 39.714 15.808 19.369 1 54.13 ? CBB HEM 201 B 1 
HETATM 22 C C1C HEM . . . G 5 35.418 17.047 20.954 1 50.17 ? C1C HEM 201 B 1 
HETATM 23 C C2C HEM . . . G 5 35.01 18.287 20.399 1 45.96 ? C2C HEM 201 B 1 
HETATM 24 C C3C HEM . . . G 5 33.692 18.473 20.798 1 46.58 ? C3C HEM 201 B 1 
HETATM 25 C C4C HEM . . . G 5 33.336 17.332 21.602 1 49.25 ? C4C HEM 201 B 1 
HETATM 26 C CMC HEM . . . G 5 35.809 19.157 19.454 1 42.97 ? CMC HEM 201 B 1 
HETATM 27 C CAC HEM . . . G 5 32.77 19.537 20.36 1 44.37 ? CAC HEM 201 B 1 
HETATM 28 C CBC HEM . . . G 5 33.1 20.814 20.488 1 46.53 ? CBC HEM 201 B 1 
HETATM 29 C C1D HEM . . . G 5 31.779 16.123 22.997 1 51.93 ? C1D HEM 201 B 1 
HETATM 30 C C2D HEM . . . G 5 30.415 15.886 23.526 1 50.84 ? C2D HEM 201 B 1 
HETATM 31 C C3D HEM . . . G 5 30.494 14.74 24.222 1 51.44 ? C3D HEM 201 B 1 
HETATM 32 C C4D HEM . . . G 5 31.859 14.241 24.05 1 52.94 ? C4D HEM 201 B 1 
HETATM 33 C CMD HEM . . . G 5 29.194 16.775 23.432 1 47.04 ? CMD HEM 201 B 1 
HETATM 34 C CAD HEM . . . G 5 29.338 14.004 24.824 1 52.52 ? CAD HEM 201 B 1 
HETATM 35 C CBD HEM . . . G 5 29.136 14.122 26.321 1 54.37 ? CBD HEM 201 B 1 
HETATM 36 C CGD HEM . . . G 5 27.795 13.464 26.527 1 57.91 ? CGD HEM 201 B 1 
HETATM 37 O O1D HEM . . . G 5 27.699 12.229 26.744 1 59.6 ? O1D HEM 201 B 1 
HETATM 38 O O2D HEM . . . G 5 26.762 14.161 26.425 1 58.13 ? O2D HEM 201 B 1 
HETATM 39 N NA HEM . . . G 5 34.697 13.391 24.265 1 59.93 ? NA HEM 201 B 1 
HETATM 40 N NB HEM . . . G 5 36.47 14.638 22.339 1 53.81 ? NB HEM 201 B 1 
HETATM 41 N NC HEM . . . G 5 34.538 16.779 21.97 1 48.45 ? NC HEM 201 B 1 
HETATM 42 N ND HEM . . . G 5 32.611 15.119 23.365 1 53.05 ? ND HEM 201 B 1 
HETATM 43 FE FE HEM . . . G 5 34.44 14.889 22.914 1 51.51 ? FE HEM 201 B 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           103 
_model_server_stats.create_model_time_ms    84 
_model_server_stats.query_time_ms           346 
_model_server_stats.encode_time_ms          35 
_model_server_stats.element_count           43 
#