data_5HUC # _model_server_result.job_id sMaaN6Z8PUF_1SChW188hw _model_server_result.datetime_utc '2024-11-28 05:28:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5huc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":506}' # _entry.id 5HUC # _exptl.entry_id 5HUC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5HUC _cell.length_a 109.844 _cell.length_b 109.844 _cell.length_c 279.304 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HUC _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 54.922 95.127694 0 3 'crystal symmetry operation' 7_554 y,x,-z-1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 -93.101333 4 'crystal symmetry operation' 10_664 -y+1,-x+1,-z-1/3 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 54.922 95.127694 -93.101333 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 97 A CYS 97 1_555 B MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc2 A NE2 HIS 379 A HIS 379 1_555 B MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc3 A OE1 GLU 421 A GLU 421 1_555 B MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc4 A OE2 GLU 421 A GLU 421 1_555 B MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.91 ? metalc ? metalc5 A OD2 ASP 451 A ASP 451 1_555 B MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.881 ? # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 345 n n N H TRP sing 346 n n N H2 TRP sing 347 n n CA C TRP sing 348 n n CA CB TRP sing 349 n n CA HA TRP sing 350 n n C O TRP doub 351 n n C OXT TRP sing 352 n n CB CG TRP sing 353 n n CB HB2 TRP sing 354 n n CB HB3 TRP sing 355 n n CG CD1 TRP doub 356 n y CG CD2 TRP sing 357 n y CD1 NE1 TRP sing 358 n y CD1 HD1 TRP sing 359 n n CD2 CE2 TRP doub 360 n y CD2 CE3 TRP sing 361 n y NE1 CE2 TRP sing 362 n y NE1 HE1 TRP sing 363 n n CE2 CZ2 TRP sing 364 n y CE3 CZ3 TRP doub 365 n y CE3 HE3 TRP sing 366 n n CZ2 CH2 TRP doub 367 n y CZ2 HZ2 TRP sing 368 n n CZ3 CH2 TRP sing 369 n y CZ3 HZ3 TRP sing 370 n n CH2 HH2 TRP sing 371 n n OXT HXT TRP sing 372 n n # _atom_sites.entry_id 5HUC _atom_sites.fract_transf_matrix[1][1] 0.009104 _atom_sites.fract_transf_matrix[1][2] 0.005256 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010512 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00358 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 501 1 MN MN . C 3 PEP A 1 502 1 PEP PEP . D 4 MPD A 1 503 1 MPD MPD . E 4 MPD A 1 504 2 MPD MPD . F 4 MPD A 1 505 3 MPD MPD . G 5 TRP A 1 506 1 TRP TRP . H 6 PO4 A 1 507 1 PO4 PO4 . I 6 PO4 A 1 508 2 PO4 PO4 . J 7 HOH A 1 601 2 HOH HOH . J 7 HOH A 2 602 8 HOH HOH . J 7 HOH A 3 603 13 HOH HOH . J 7 HOH A 4 604 4 HOH HOH . J 7 HOH A 5 605 7 HOH HOH . J 7 HOH A 6 606 12 HOH HOH . J 7 HOH A 7 607 3 HOH HOH . J 7 HOH A 8 608 1 HOH HOH . J 7 HOH A 9 609 10 HOH HOH . J 7 HOH A 10 610 19 HOH HOH . J 7 HOH A 11 611 9 HOH HOH . J 7 HOH A 12 612 14 HOH HOH . J 7 HOH A 13 613 20 HOH HOH . J 7 HOH A 14 614 6 HOH HOH . J 7 HOH A 15 615 16 HOH HOH . J 7 HOH A 16 616 15 HOH HOH . J 7 HOH A 17 617 11 HOH HOH . J 7 HOH A 18 618 17 HOH HOH . J 7 HOH A 19 619 5 HOH HOH . J 7 HOH A 20 620 18 HOH HOH . J 7 HOH A 21 621 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . G 5 21.232 41.571 -36.037 1 146.82 ? N TRP 506 A 1 HETATM 2 C CA TRP . . . G 5 20.056 40.928 -36.705 1 148.61 ? CA TRP 506 A 1 HETATM 3 C C TRP . . . G 5 18.854 40.822 -35.759 1 154.49 ? C TRP 506 A 1 HETATM 4 O O TRP . . . G 5 17.749 40.461 -36.175 1 154.36 ? O TRP 506 A 1 HETATM 5 C CB TRP . . . G 5 20.432 39.541 -37.252 1 143.5 ? CB TRP 506 A 1 HETATM 6 C CG TRP . . . G 5 20.872 38.568 -36.2 1 138.21 ? CG TRP 506 A 1 HETATM 7 C CD1 TRP . . . G 5 22.132 38.415 -35.7 1 138.78 ? CD1 TRP 506 A 1 HETATM 8 C CD2 TRP . . . G 5 20.05 37.617 -35.515 1 135.68 ? CD2 TRP 506 A 1 HETATM 9 N NE1 TRP . . . G 5 22.148 37.427 -34.745 1 137.83 ? NE1 TRP 506 A 1 HETATM 10 C CE2 TRP . . . G 5 20.882 36.92 -34.611 1 134.51 ? CE2 TRP 506 A 1 HETATM 11 C CE3 TRP . . . G 5 18.689 37.287 -35.575 1 133.96 ? CE3 TRP 506 A 1 HETATM 12 C CZ2 TRP . . . G 5 20.4 35.911 -33.775 1 131.48 ? CZ2 TRP 506 A 1 HETATM 13 C CZ3 TRP . . . G 5 18.209 36.282 -34.743 1 130.55 ? CZ3 TRP 506 A 1 HETATM 14 C CH2 TRP . . . G 5 19.065 35.607 -33.854 1 131.83 ? CH2 TRP 506 A 1 HETATM 15 O OXT TRP . . . G 5 18.953 41.093 -34.558 1 158.32 ? OXT TRP 506 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 15 #