data_5HVB
#
_model_server_result.job_id            zM1qYhbzMrxT_bsY0g1KjQ 
_model_server_result.datetime_utc      '2024-11-06 15:21:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5hvb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    5HVB 
#
_exptl.entry_id    5HVB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5HVB 
_cell.length_a            85.973 
_cell.length_b            85.973 
_cell.length_c            76.833 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5HVB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 277 n n 
PA O2A NDP sing 278 n n 
PA O5B NDP sing 279 n n 
PA O3 NDP sing 280 n n 
O2A HOA2 NDP sing 281 n n 
O5B C5B NDP sing 282 n n 
C5B C4B NDP sing 283 n n 
C5B H51A NDP sing 284 n n 
C5B H52A NDP sing 285 n n 
C4B O4B NDP sing 286 n n 
C4B C3B NDP sing 287 n n 
C4B H4B NDP sing 288 n n 
O4B C1B NDP sing 289 n n 
C3B O3B NDP sing 290 n n 
C3B C2B NDP sing 291 n n 
C3B H3B NDP sing 292 n n 
O3B HO3A NDP sing 293 n n 
C2B O2B NDP sing 294 n n 
C2B C1B NDP sing 295 n n 
C2B H2B NDP sing 296 n n 
O2B P2B NDP sing 297 n n 
C1B N9A NDP sing 298 n n 
C1B H1B NDP sing 299 n n 
N9A C8A NDP sing 300 n y 
N9A C4A NDP sing 301 n y 
C8A N7A NDP doub 302 n y 
C8A H8A NDP sing 303 n n 
N7A C5A NDP sing 304 n y 
C5A C6A NDP sing 305 n y 
C5A C4A NDP doub 306 n y 
C6A N6A NDP sing 307 n n 
C6A N1A NDP doub 308 n y 
N6A H61A NDP sing 309 n n 
N6A H62A NDP sing 310 n n 
N1A C2A NDP sing 311 n y 
C2A N3A NDP doub 312 n y 
C2A H2A NDP sing 313 n n 
N3A C4A NDP sing 314 n y 
O3 PN NDP sing 315 n n 
PN O1N NDP doub 316 n n 
PN O2N NDP sing 317 n n 
PN O5D NDP sing 318 n n 
O2N H21N NDP sing 319 n n 
O5D C5D NDP sing 320 n n 
C5D C4D NDP sing 321 n n 
C5D H51N NDP sing 322 n n 
C5D H52N NDP sing 323 n n 
C4D O4D NDP sing 324 n n 
C4D C3D NDP sing 325 n n 
C4D H4D NDP sing 326 n n 
O4D C1D NDP sing 327 n n 
C3D O3D NDP sing 328 n n 
C3D C2D NDP sing 329 n n 
C3D H3D NDP sing 330 n n 
O3D HO3N NDP sing 331 n n 
C2D O2D NDP sing 332 n n 
C2D C1D NDP sing 333 n n 
C2D H2D NDP sing 334 n n 
O2D HO2N NDP sing 335 n n 
C1D N1N NDP sing 336 n n 
C1D H1D NDP sing 337 n n 
N1N C2N NDP sing 338 n n 
N1N C6N NDP sing 339 n n 
C2N C3N NDP doub 340 n n 
C2N H2N NDP sing 341 n n 
C3N C7N NDP sing 342 n n 
C3N C4N NDP sing 343 n n 
C7N O7N NDP doub 344 n n 
C7N N7N NDP sing 345 n n 
N7N H71N NDP sing 346 n n 
N7N H72N NDP sing 347 n n 
C4N C5N NDP sing 348 n n 
C4N H41N NDP sing 349 n n 
C4N H42N NDP sing 350 n n 
C5N C6N NDP doub 351 n n 
C5N H5N NDP sing 352 n n 
C6N H6N NDP sing 353 n n 
P2B O1X NDP doub 354 n n 
P2B O2X NDP sing 355 n n 
P2B O3X NDP sing 356 n n 
O2X HOP2 NDP sing 357 n n 
O3X HOP3 NDP sing 358 n n 
#
_atom_sites.entry_id                     5HVB 
_atom_sites.fract_transf_matrix[1][1]    0.011632 
_atom_sites.fract_transf_matrix[1][2]    0.006715 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013431 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013015 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 65O A 1 201 1 65O DRG . 
C 3 NDP A 1 202 1 NDP NDP . 
D 4 HOH A 1 301 13 HOH HOH . 
D 4 HOH A 2 302 25 HOH HOH . 
D 4 HOH A 3 303 36 HOH HOH . 
D 4 HOH A 4 304 43 HOH HOH . 
D 4 HOH A 5 305 50 HOH HOH . 
D 4 HOH A 6 306 29 HOH HOH . 
D 4 HOH A 7 307 35 HOH HOH . 
D 4 HOH A 8 308 14 HOH HOH . 
D 4 HOH A 9 309 5 HOH HOH . 
D 4 HOH A 10 310 49 HOH HOH . 
D 4 HOH A 11 311 20 HOH HOH . 
D 4 HOH A 12 312 15 HOH HOH . 
D 4 HOH A 13 313 10 HOH HOH . 
D 4 HOH A 14 314 47 HOH HOH . 
D 4 HOH A 15 315 7 HOH HOH . 
D 4 HOH A 16 316 46 HOH HOH . 
D 4 HOH A 17 317 34 HOH HOH . 
D 4 HOH A 18 318 12 HOH HOH . 
D 4 HOH A 19 319 48 HOH HOH . 
D 4 HOH A 20 320 4 HOH HOH . 
D 4 HOH A 21 321 2 HOH HOH . 
D 4 HOH A 22 322 28 HOH HOH . 
D 4 HOH A 23 323 44 HOH HOH . 
D 4 HOH A 24 324 19 HOH HOH . 
D 4 HOH A 25 325 30 HOH HOH . 
D 4 HOH A 26 326 21 HOH HOH . 
D 4 HOH A 27 327 3 HOH HOH . 
D 4 HOH A 28 328 6 HOH HOH . 
D 4 HOH A 29 329 11 HOH HOH . 
D 4 HOH A 30 330 22 HOH HOH . 
D 4 HOH A 31 331 9 HOH HOH . 
D 4 HOH A 32 332 51 HOH HOH . 
D 4 HOH A 33 333 8 HOH HOH . 
D 4 HOH A 34 334 18 HOH HOH . 
D 4 HOH A 35 335 39 HOH HOH . 
D 4 HOH A 36 336 37 HOH HOH . 
D 4 HOH A 37 337 1 HOH HOH . 
D 4 HOH A 38 338 17 HOH HOH . 
D 4 HOH A 39 339 42 HOH HOH . 
D 4 HOH A 40 340 27 HOH HOH . 
D 4 HOH A 41 341 23 HOH HOH . 
D 4 HOH A 42 342 40 HOH HOH . 
D 4 HOH A 43 343 16 HOH HOH . 
D 4 HOH A 44 344 31 HOH HOH . 
D 4 HOH A 45 345 45 HOH HOH . 
D 4 HOH A 46 346 41 HOH HOH . 
D 4 HOH A 47 347 38 HOH HOH . 
D 4 HOH A 48 348 33 HOH HOH . 
D 4 HOH A 49 349 26 HOH HOH . 
D 4 HOH A 50 350 32 HOH HOH . 
D 4 HOH A 51 351 24 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . C 3 -5.918 -22.642 -9.846 1 20.75 ? PA NDP 202 A 1 
HETATM 2 O O1A NDP . . . C 3 -5.795 -24.137 -9.572 1 20.53 ? O1A NDP 202 A 1 
HETATM 3 O O2A NDP . . . C 3 -5.043 -21.736 -9.169 1 17.78 ? O2A NDP 202 A 1 
HETATM 4 O O5B NDP . . . C 3 -5.843 -22.348 -11.383 1 19.21 ? O5B NDP 202 A 1 
HETATM 5 C C5B NDP . . . C 3 -6.539 -23.188 -12.305 1 19.03 ? C5B NDP 202 A 1 
HETATM 6 C C4B NDP . . . C 3 -5.819 -23.097 -13.653 1 23.65 ? C4B NDP 202 A 1 
HETATM 7 O O4B NDP . . . C 3 -4.481 -23.496 -13.379 1 22.59 ? O4B NDP 202 A 1 
HETATM 8 C C3B NDP . . . C 3 -6.365 -24.133 -14.527 1 23.18 ? C3B NDP 202 A 1 
HETATM 9 O O3B NDP . . . C 3 -7.401 -23.552 -15.338 1 25.64 ? O3B NDP 202 A 1 
HETATM 10 C C2B NDP . . . C 3 -5.167 -24.567 -15.398 1 22.87 ? C2B NDP 202 A 1 
HETATM 11 O O2B NDP . . . C 3 -4.828 -23.487 -16.286 1 26.73 ? O2B NDP 202 A 1 
HETATM 12 C C1B NDP . . . C 3 -4.034 -24.503 -14.402 1 22.89 ? C1B NDP 202 A 1 
HETATM 13 N N9A NDP . . . C 3 -3.86 -25.682 -13.605 1 22.66 ? N9A NDP 202 A 1 
HETATM 14 C C8A NDP . . . C 3 -4.378 -26.092 -12.412 1 24.27 ? C8A NDP 202 A 1 
HETATM 15 N N7A NDP . . . C 3 -3.815 -27.282 -12.11 1 25.32 ? N7A NDP 202 A 1 
HETATM 16 C C5A NDP . . . C 3 -2.978 -27.63 -13.112 1 23.59 ? C5A NDP 202 A 1 
HETATM 17 C C6A NDP . . . C 3 -2.178 -28.722 -13.332 1 26.88 ? C6A NDP 202 A 1 
HETATM 18 N N6A NDP . . . C 3 -2.137 -29.76 -12.424 1 29.51 ? N6A NDP 202 A 1 
HETATM 19 N N1A NDP . . . C 3 -1.401 -28.776 -14.418 1 24.89 ? N1A NDP 202 A 1 
HETATM 20 C C2A NDP . . . C 3 -1.406 -27.751 -15.408 1 25.42 ? C2A NDP 202 A 1 
HETATM 21 N N3A NDP . . . C 3 -2.236 -26.643 -15.18 1 27.75 ? N3A NDP 202 A 1 
HETATM 22 C C4A NDP . . . C 3 -3.008 -26.647 -14.046 1 26.57 ? C4A NDP 202 A 1 
HETATM 23 O O3 NDP . . . C 3 -7.465 -22.17 -9.557 1 21.22 ? O3 NDP 202 A 1 
HETATM 24 P PN NDP . . . C 3 -8.725 -22.41 -8.644 1 21.74 ? PN NDP 202 A 1 
HETATM 25 O O1N NDP . . . C 3 -8.727 -23.686 -7.863 1 20.42 ? O1N NDP 202 A 1 
HETATM 26 O O2N NDP . . . C 3 -9.842 -22.194 -9.579 1 27.98 ? O2N NDP 202 A 1 
HETATM 27 O O5D NDP . . . C 3 -8.849 -21.209 -7.863 1 26.78 ? O5D NDP 202 A 1 
HETATM 28 C C5D NDP . . . C 3 -8.1 -20.494 -6.954 1 24.47 ? C5D NDP 202 A 1 
HETATM 29 C C4D NDP . . . C 3 -9.144 -19.661 -6.073 1 25.15 ? C4D NDP 202 A 1 
HETATM 30 O O4D NDP . . . C 3 -8.778 -19.919 -4.684 1 22.02 ? O4D NDP 202 A 1 
HETATM 31 C C3D NDP . . . C 3 -9.081 -18.184 -6.245 1 21.7 ? C3D NDP 202 A 1 
HETATM 32 O O3D NDP . . . C 3 -10.298 -17.517 -5.788 1 22.15 ? O3D NDP 202 A 1 
HETATM 33 C C2D NDP . . . C 3 -7.93 -17.817 -5.336 1 18.76 ? C2D NDP 202 A 1 
HETATM 34 O O2D NDP . . . C 3 -7.977 -16.545 -4.814 1 24.09 ? O2D NDP 202 A 1 
HETATM 35 C C1D NDP . . . C 3 -8.182 -18.711 -4.105 1 21.45 ? C1D NDP 202 A 1 
HETATM 36 N N1N NDP . . . C 3 -7.02 -19.28 -3.367 1 20.83 ? N1N NDP 202 A 1 
HETATM 37 C C2N NDP . . . C 3 -7.205 -19.425 -2.004 1 18.83 ? C2N NDP 202 A 1 
HETATM 38 C C3N NDP . . . C 3 -6.265 -20.012 -1.2 1 19.03 ? C3N NDP 202 A 1 
HETATM 39 C C7N NDP . . . C 3 -6.53 -20.16 0.177 1 21.05 ? C7N NDP 202 A 1 
HETATM 40 O O7N NDP . . . C 3 -7.612 -19.82 0.768 1 22.61 ? O7N NDP 202 A 1 
HETATM 41 N N7N NDP . . . C 3 -5.574 -20.716 0.827 1 16.82 ? N7N NDP 202 A 1 
HETATM 42 C C4N NDP . . . C 3 -5.105 -20.604 -1.874 1 22.54 ? C4N NDP 202 A 1 
HETATM 43 C C5N NDP . . . C 3 -4.914 -20.432 -3.296 1 21.6 ? C5N NDP 202 A 1 
HETATM 44 C C6N NDP . . . C 3 -5.899 -19.792 -4.086 1 20.03 ? C6N NDP 202 A 1 
HETATM 45 P P2B NDP . . . C 3 -4.726 -23.635 -17.887 1 22.16 ? P2B NDP 202 A 1 
HETATM 46 O O1X NDP . . . C 3 -4.026 -22.472 -18.429 1 20.89 ? O1X NDP 202 A 1 
HETATM 47 O O2X NDP . . . C 3 -4.21 -25.084 -18.216 1 26.09 ? O2X NDP 202 A 1 
HETATM 48 O O3X NDP . . . C 3 -6.202 -23.662 -18.192 1 25.16 ? O3X NDP 202 A 1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           226 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           48 
#