data_5HVO # _model_server_result.job_id aFEqgJSOsNLauu_yi3Kkxg _model_server_result.datetime_utc '2024-11-08 18:01:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hvo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":502}' # _entry.id 5HVO # _exptl.entry_id 5HVO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 335.35 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1S,2S,3R,6S)-4-(HYDROXYMETHYL)-6-{[(1S,2S,3S,4R,5R)-2,3,4-TRIHYDROXY-5-(HYDROXYMETHYL)CYCLOHEXYL]AMINO}CYCLOHEX-4-ENE-1,2,3-TRIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HVO _cell.length_a 88.276 _cell.length_b 130.581 _cell.length_c 184.813 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HVO _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 PISA tetrameric 4 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 A,B,E,F,G,H,M,N 3 1,2 C,D,I,J,K,L,O,P 4 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 130.581 0 3 'crystal symmetry operation' 2_564 x,-y+1,-z-1 1 0 0 0 -1 0 0 0 -1 0 130.581 -184.813 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C14 H25 N O8' _chem_comp.formula_weight 335.35 _chem_comp.id VDM _chem_comp.mon_nstd_flag . _chem_comp.name (1S,2S,3R,6S)-4-(HYDROXYMETHYL)-6-{[(1S,2S,3S,4R,5R)-2,3,4-TRIHYDROXY-5-(HYDROXYMETHYL)CYCLOHEXYL]AMINO}CYCLOHEX-4-ENE-1,2,3-TRIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms VALIDOXYLAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O7 C7 VDM sing 416 n n O7 H7 VDM sing 417 n n C7 C5 VDM sing 418 n n C7 H7C1 VDM sing 419 n n C7 H7C2 VDM sing 420 n n C5 C6 VDM doub 421 n n C5 C4 VDM sing 422 n n C6 C1 VDM sing 423 n n C6 H6 VDM sing 424 n n C4 O4 VDM sing 425 n n C4 C3 VDM sing 426 n n C4 H4 VDM sing 427 n n O4 HA VDM sing 428 n n C3 O3 VDM sing 429 n n C3 C2 VDM sing 430 n n C3 H3 VDM sing 431 n n O3 HB VDM sing 432 n n C2 O2 VDM sing 433 n n C2 C1 VDM sing 434 n n C2 H2 VDM sing 435 n n O2 HC VDM sing 436 n n C1 N1' VDM sing 437 n n C1 H1 VDM sing 438 n n N1' C1' VDM sing 439 n n N1' H1' VDM sing 440 n n C1' HD VDM sing 441 n n C1' C2' VDM sing 442 n n C1' C6' VDM sing 443 n n C2' H2' VDM sing 444 n n C2' O2' VDM sing 445 n n C2' C3' VDM sing 446 n n O2' HE VDM sing 447 n n C6' "H6'1" VDM sing 448 n n C6' "H6'2" VDM sing 449 n n C6' C5' VDM sing 450 n n C5' H5' VDM sing 451 n n C5' C7' VDM sing 452 n n C5' C4' VDM sing 453 n n C7' "H7'1" VDM sing 454 n n C7' "H7'2" VDM sing 455 n n C7' O7' VDM sing 456 n n O7' H7' VDM sing 457 n n C4' H4' VDM sing 458 n n C4' O4' VDM sing 459 n n C4' C3' VDM sing 460 n n O4' HF VDM sing 461 n n C3' H3' VDM sing 462 n n C3' O3' VDM sing 463 n n O3' HG VDM sing 464 n n # _atom_sites.entry_id 5HVO _atom_sites.fract_transf_matrix[1][1] 0.011328 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007658 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005411 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 UDP A 1 501 501 UDP UDP . F 3 VDM A 1 502 502 VDM VDM . G 2 UDP B 1 501 501 UDP UDP . H 3 VDM B 1 502 502 VDM VDM . I 2 UDP C 1 501 501 UDP UDP . J 3 VDM C 1 502 502 VDM VDM . K 2 UDP D 1 501 501 UDP UDP . L 3 VDM D 1 502 502 VDM VDM . M 4 HOH A 1 601 49 HOH HOH . M 4 HOH A 2 602 21 HOH HOH . M 4 HOH A 3 603 52 HOH HOH . M 4 HOH A 4 604 10 HOH HOH . M 4 HOH A 5 605 86 HOH HOH . M 4 HOH A 6 606 119 HOH HOH . M 4 HOH A 7 607 83 HOH HOH . M 4 HOH A 8 608 146 HOH HOH . M 4 HOH A 9 609 5 HOH HOH . M 4 HOH A 10 610 41 HOH HOH . M 4 HOH A 11 611 142 HOH HOH . M 4 HOH A 12 612 40 HOH HOH . M 4 HOH A 13 613 148 HOH HOH . M 4 HOH A 14 614 20 HOH HOH . M 4 HOH A 15 615 112 HOH HOH . M 4 HOH A 16 616 62 HOH HOH . M 4 HOH A 17 617 7 HOH HOH . M 4 HOH A 18 618 139 HOH HOH . M 4 HOH A 19 619 75 HOH HOH . M 4 HOH A 20 620 73 HOH HOH . M 4 HOH A 21 621 69 HOH HOH . M 4 HOH A 22 622 17 HOH HOH . M 4 HOH A 23 623 25 HOH HOH . M 4 HOH A 24 624 31 HOH HOH . M 4 HOH A 25 625 29 HOH HOH . M 4 HOH A 26 626 19 HOH HOH . M 4 HOH A 27 627 37 HOH HOH . M 4 HOH A 28 628 28 HOH HOH . M 4 HOH A 29 629 167 HOH HOH . M 4 HOH A 30 630 33 HOH HOH . M 4 HOH A 31 631 110 HOH HOH . M 4 HOH A 32 632 181 HOH HOH . M 4 HOH A 33 633 144 HOH HOH . M 4 HOH A 34 634 88 HOH HOH . M 4 HOH A 35 635 14 HOH HOH . M 4 HOH A 36 636 38 HOH HOH . M 4 HOH A 37 637 81 HOH HOH . M 4 HOH A 38 638 90 HOH HOH . M 4 HOH A 39 639 149 HOH HOH . M 4 HOH A 40 640 176 HOH HOH . M 4 HOH A 41 641 185 HOH HOH . M 4 HOH A 42 642 96 HOH HOH . M 4 HOH A 43 643 168 HOH HOH . M 4 HOH A 44 644 107 HOH HOH . M 4 HOH A 45 645 51 HOH HOH . M 4 HOH A 46 646 136 HOH HOH . M 4 HOH A 47 647 191 HOH HOH . M 4 HOH A 48 648 84 HOH HOH . M 4 HOH A 49 649 34 HOH HOH . M 4 HOH A 50 650 85 HOH HOH . M 4 HOH A 51 651 192 HOH HOH . N 4 HOH B 1 601 177 HOH HOH . N 4 HOH B 2 602 132 HOH HOH . N 4 HOH B 3 603 174 HOH HOH . N 4 HOH B 4 604 48 HOH HOH . N 4 HOH B 5 605 116 HOH HOH . N 4 HOH B 6 606 65 HOH HOH . N 4 HOH B 7 607 50 HOH HOH . N 4 HOH B 8 608 99 HOH HOH . N 4 HOH B 9 609 47 HOH HOH . N 4 HOH B 10 610 89 HOH HOH . N 4 HOH B 11 611 61 HOH HOH . N 4 HOH B 12 612 1 HOH HOH . N 4 HOH B 13 613 159 HOH HOH . N 4 HOH B 14 614 104 HOH HOH . N 4 HOH B 15 615 183 HOH HOH . N 4 HOH B 16 616 70 HOH HOH . N 4 HOH B 17 617 16 HOH HOH . N 4 HOH B 18 618 32 HOH HOH . N 4 HOH B 19 619 78 HOH HOH . N 4 HOH B 20 620 82 HOH HOH . N 4 HOH B 21 621 156 HOH HOH . N 4 HOH B 22 622 106 HOH HOH . N 4 HOH B 23 623 24 HOH HOH . N 4 HOH B 24 624 150 HOH HOH . N 4 HOH B 25 625 123 HOH HOH . N 4 HOH B 26 626 91 HOH HOH . N 4 HOH B 27 627 11 HOH HOH . N 4 HOH B 28 628 53 HOH HOH . N 4 HOH B 29 629 35 HOH HOH . N 4 HOH B 30 630 160 HOH HOH . N 4 HOH B 31 631 66 HOH HOH . N 4 HOH B 32 632 137 HOH HOH . N 4 HOH B 33 633 43 HOH HOH . N 4 HOH B 34 634 100 HOH HOH . N 4 HOH B 35 635 74 HOH HOH . N 4 HOH B 36 636 153 HOH HOH . N 4 HOH B 37 637 122 HOH HOH . N 4 HOH B 38 638 39 HOH HOH . N 4 HOH B 39 639 147 HOH HOH . N 4 HOH B 40 640 171 HOH HOH . N 4 HOH B 41 641 180 HOH HOH . N 4 HOH B 42 642 121 HOH HOH . N 4 HOH B 43 643 103 HOH HOH . N 4 HOH B 44 644 172 HOH HOH . N 4 HOH B 45 645 105 HOH HOH . O 4 HOH C 1 601 157 HOH HOH . O 4 HOH C 2 602 118 HOH HOH . O 4 HOH C 3 603 55 HOH HOH . O 4 HOH C 4 604 4 HOH HOH . O 4 HOH C 5 605 18 HOH HOH . O 4 HOH C 6 606 173 HOH HOH . O 4 HOH C 7 607 27 HOH HOH . O 4 HOH C 8 608 44 HOH HOH . O 4 HOH C 9 609 76 HOH HOH . O 4 HOH C 10 610 77 HOH HOH . O 4 HOH C 11 611 8 HOH HOH . O 4 HOH C 12 612 94 HOH HOH . O 4 HOH C 13 613 130 HOH HOH . O 4 HOH C 14 614 64 HOH HOH . O 4 HOH C 15 615 15 HOH HOH . O 4 HOH C 16 616 36 HOH HOH . O 4 HOH C 17 617 59 HOH HOH . O 4 HOH C 18 618 30 HOH HOH . O 4 HOH C 19 619 87 HOH HOH . O 4 HOH C 20 620 170 HOH HOH . O 4 HOH C 21 621 165 HOH HOH . O 4 HOH C 22 622 42 HOH HOH . O 4 HOH C 23 623 115 HOH HOH . O 4 HOH C 24 624 128 HOH HOH . O 4 HOH C 25 625 190 HOH HOH . O 4 HOH C 26 626 163 HOH HOH . O 4 HOH C 27 627 57 HOH HOH . O 4 HOH C 28 628 151 HOH HOH . O 4 HOH C 29 629 161 HOH HOH . O 4 HOH C 30 630 97 HOH HOH . O 4 HOH C 31 631 135 HOH HOH . O 4 HOH C 32 632 178 HOH HOH . O 4 HOH C 33 633 143 HOH HOH . O 4 HOH C 34 634 26 HOH HOH . O 4 HOH C 35 635 138 HOH HOH . O 4 HOH C 36 636 186 HOH HOH . O 4 HOH C 37 637 60 HOH HOH . O 4 HOH C 38 638 155 HOH HOH . O 4 HOH C 39 639 182 HOH HOH . O 4 HOH C 40 640 188 HOH HOH . O 4 HOH C 41 641 169 HOH HOH . O 4 HOH C 42 642 179 HOH HOH . P 4 HOH D 1 601 98 HOH HOH . P 4 HOH D 2 602 23 HOH HOH . P 4 HOH D 3 603 2 HOH HOH . P 4 HOH D 4 604 134 HOH HOH . P 4 HOH D 5 605 71 HOH HOH . P 4 HOH D 6 606 140 HOH HOH . P 4 HOH D 7 607 67 HOH HOH . P 4 HOH D 8 608 125 HOH HOH . P 4 HOH D 9 609 6 HOH HOH . P 4 HOH D 10 610 108 HOH HOH . P 4 HOH D 11 611 158 HOH HOH . P 4 HOH D 12 612 68 HOH HOH . P 4 HOH D 13 613 154 HOH HOH . P 4 HOH D 14 614 46 HOH HOH . P 4 HOH D 15 615 133 HOH HOH . P 4 HOH D 16 616 95 HOH HOH . P 4 HOH D 17 617 141 HOH HOH . P 4 HOH D 18 618 109 HOH HOH . P 4 HOH D 19 619 3 HOH HOH . P 4 HOH D 20 620 127 HOH HOH . P 4 HOH D 21 621 72 HOH HOH . P 4 HOH D 22 622 63 HOH HOH . P 4 HOH D 23 623 189 HOH HOH . P 4 HOH D 24 624 184 HOH HOH . P 4 HOH D 25 625 9 HOH HOH . P 4 HOH D 26 626 79 HOH HOH . P 4 HOH D 27 627 124 HOH HOH . P 4 HOH D 28 628 56 HOH HOH . P 4 HOH D 29 629 93 HOH HOH . P 4 HOH D 30 630 13 HOH HOH . P 4 HOH D 31 631 54 HOH HOH . P 4 HOH D 32 632 102 HOH HOH . P 4 HOH D 33 633 175 HOH HOH . P 4 HOH D 34 634 129 HOH HOH . P 4 HOH D 35 635 126 HOH HOH . P 4 HOH D 36 636 117 HOH HOH . P 4 HOH D 37 637 162 HOH HOH . P 4 HOH D 38 638 114 HOH HOH . P 4 HOH D 39 639 131 HOH HOH . P 4 HOH D 40 640 187 HOH HOH . P 4 HOH D 41 641 58 HOH HOH . P 4 HOH D 42 642 80 HOH HOH . P 4 HOH D 43 643 113 HOH HOH . P 4 HOH D 44 644 111 HOH HOH . P 4 HOH D 45 645 120 HOH HOH . P 4 HOH D 46 646 166 HOH HOH . P 4 HOH D 47 647 12 HOH HOH . P 4 HOH D 48 648 101 HOH HOH . P 4 HOH D 49 649 22 HOH HOH . P 4 HOH D 50 650 45 HOH HOH . P 4 HOH D 51 651 152 HOH HOH . P 4 HOH D 52 652 145 HOH HOH . P 4 HOH D 53 653 92 HOH HOH . P 4 HOH D 54 654 164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O7 VDM . . . H 3 -10.323 80.992 -18.039 1 55.7 ? O7 VDM 502 B 1 HETATM 2 C C7 VDM . . . H 3 -9.327 80.808 -19.035 1 52.48 ? C7 VDM 502 B 1 HETATM 3 C C5 VDM . . . H 3 -10.012 80.582 -20.33 1 50.86 ? C5 VDM 502 B 1 HETATM 4 C C6 VDM . . . H 3 -9.853 79.411 -20.92 1 48.78 ? C6 VDM 502 B 1 HETATM 5 C C4 VDM . . . H 3 -10.895 81.657 -20.88 1 57.18 ? C4 VDM 502 B 1 HETATM 6 O O4 VDM . . . H 3 -10.295 82.903 -20.642 1 52.06 ? O4 VDM 502 B 1 HETATM 7 C C3 VDM . . . H 3 -11.114 81.518 -22.364 1 54.93 ? C3 VDM 502 B 1 HETATM 8 O O3 VDM . . . H 3 -12.173 82.352 -22.782 1 56.8 ? O3 VDM 502 B 1 HETATM 9 C C2 VDM . . . H 3 -11.491 80.114 -22.724 1 49.22 ? C2 VDM 502 B 1 HETATM 10 O O2 VDM . . . H 3 -11.589 80.133 -24.124 1 49.98 ? O2 VDM 502 B 1 HETATM 11 C C1 VDM . . . H 3 -10.525 79.04 -22.208 1 49.92 ? C1 VDM 502 B 1 HETATM 12 N N1' VDM . . . H 3 -9.474 78.633 -23.117 1 47.67 ? N1' VDM 502 B 1 HETATM 13 C C1' VDM . . . H 3 -9.707 77.925 -24.35 1 47.29 ? C1' VDM 502 B 1 HETATM 14 C C2' VDM . . . H 3 -9.574 76.474 -24.307 1 47.31 ? C2' VDM 502 B 1 HETATM 15 O O2' VDM . . . H 3 -9.99 76.06 -23.032 1 43.5 ? O2' VDM 502 B 1 HETATM 16 C C6' VDM . . . H 3 -8.865 78.599 -25.438 1 41.94 ? C6' VDM 502 B 1 HETATM 17 C C5' VDM . . . H 3 -7.399 78.02 -25.807 1 41.92 ? C5' VDM 502 B 1 HETATM 18 C C7' VDM . . . H 3 -6.932 78.574 -27.109 1 44.22 ? C7' VDM 502 B 1 HETATM 19 O O7' VDM . . . H 3 -6.729 79.954 -26.976 1 42.68 ? O7' VDM 502 B 1 HETATM 20 C C4' VDM . . . H 3 -7.571 76.409 -25.787 1 42.06 ? C4' VDM 502 B 1 HETATM 21 O O4' VDM . . . H 3 -6.299 75.834 -25.897 1 37.82 ? O4' VDM 502 B 1 HETATM 22 C C3' VDM . . . H 3 -8.256 75.905 -24.536 1 41.16 ? C3' VDM 502 B 1 HETATM 23 O O3' VDM . . . H 3 -8.429 74.533 -24.667 1 41.39 ? O3' VDM 502 B 1 HETATM 24 H H7 VDM . . . H 3 -10.987 80.299 -18.115 1 66.84 ? H7 VDM 502 B 1 HETATM 25 H H7C1 VDM . . . H 3 -8.691 81.688 -19.101 1 62.97 ? H7C1 VDM 502 B 1 HETATM 26 H H7C2 VDM . . . H 3 -8.709 79.947 -18.794 1 62.97 ? H7C2 VDM 502 B 1 HETATM 27 H H6 VDM . . . H 3 -9.208 78.693 -20.454 1 58.54 ? H6 VDM 502 B 1 HETATM 28 H H4 VDM . . . H 3 -11.867 81.623 -20.381 1 68.61 ? H4 VDM 502 B 1 HETATM 29 H H1 VDM . . . H 3 -11.125 78.148 -22.009 1 59.9 ? H1 VDM 502 B 1 HETATM 30 H HA VDM . . . H 3 -10.968 83.521 -20.334 1 62.47 ? HA VDM 502 B 1 HETATM 31 H H3 VDM . . . H 3 -10.189 81.784 -22.887 1 65.91 ? H3 VDM 502 B 1 HETATM 32 H HB VDM . . . H 3 -12.276 82.277 -23.739 1 68.15 ? HB VDM 502 B 1 HETATM 33 H H2 VDM . . . H 3 -12.478 79.917 -22.301 1 59.07 ? H2 VDM 502 B 1 HETATM 34 H HC VDM . . . H 3 -12.281 80.744 -24.399 1 59.98 ? HC VDM 502 B 1 HETATM 35 H H1' VDM . . . H 3 -8.518 78.846 -22.875 1 57.2 ? H1' VDM 502 B 1 HETATM 36 H HD VDM . . . H 3 -10.751 78.074 -24.628 1 56.75 ? HD VDM 502 B 1 HETATM 37 H H2' VDM . . . H 3 -10.264 76.046 -25.038 1 56.77 ? H2' VDM 502 B 1 HETATM 38 H "H6'1" VDM . . . H 3 -9.457 78.605 -26.35 1 50.32 ? "H6'1" VDM 502 B 1 HETATM 39 H "H6'2" VDM . . . H 3 -8.739 79.636 -25.139 1 50.32 ? "H6'2" VDM 502 B 1 HETATM 40 H HE VDM . . . H 3 -10.93 75.863 -23.072 1 52.2 ? HE VDM 502 B 1 HETATM 41 H H3' VDM . . . H 3 -7.624 76.114 -23.673 1 49.39 ? H3' VDM 502 B 1 HETATM 42 H H5' VDM . . . H 3 -6.689 78.314 -25.027 1 50.3 ? H5' VDM 502 B 1 HETATM 43 H "H7'1" VDM . . . H 3 -7.673 78.391 -27.881 1 53.06 ? "H7'1" VDM 502 B 1 HETATM 44 H "H7'2" VDM . . . H 3 -6.004 78.09 -27.4 1 53.06 ? "H7'2" VDM 502 B 1 HETATM 45 H H4' VDM . . . H 3 -8.179 76.115 -26.646 1 50.47 ? H4' VDM 502 B 1 HETATM 46 H H7' VDM . . . H 3 -7.371 80.411 -27.53 1 51.21 ? H7' VDM 502 B 1 HETATM 47 H HF VDM . . . H 3 -5.767 76.108 -25.145 1 45.39 ? HF VDM 502 B 1 HETATM 48 H HG VDM . . . H 3 -7.589 74.136 -24.913 1 49.66 ? HG VDM 502 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 48 #