data_5HVS # _model_server_result.job_id DFxeLE7jisMN7lzfbC0Lqg _model_server_result.datetime_utc '2024-11-13 18:33:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hvs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":205}' # _entry.id 5HVS # _exptl.entry_id 5HVS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HVS _cell.length_a 68.531 _cell.length_b 69.744 _cell.length_c 133.793 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HVS _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 N N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 181 n n C1 C2 GOL sing 182 n n C1 H11 GOL sing 183 n n C1 H12 GOL sing 184 n n O1 HO1 GOL sing 185 n n C2 O2 GOL sing 186 n n C2 C3 GOL sing 187 n n C2 H2 GOL sing 188 n n O2 HO2 GOL sing 189 n n C3 O3 GOL sing 190 n n C3 H31 GOL sing 191 n n C3 H32 GOL sing 192 n n O3 HO3 GOL sing 193 n n # _atom_sites.entry_id 5HVS _atom_sites.fract_transf_matrix[1][1] 0.014592 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014338 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007474 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 201 115 SO4 SO4 . E 2 SO4 A 1 202 116 SO4 SO4 . F 3 65V A 1 203 121 65V MIF . G 2 SO4 B 1 201 115 SO4 SO4 . H 2 SO4 B 1 202 117 SO4 SO4 . I 3 65V B 1 203 122 65V MIF . J 2 SO4 B 1 204 141 SO4 SO4 . K 4 GOL B 1 205 142 GOL GOL . L 2 SO4 C 1 201 116 SO4 SO4 . M 3 65V C 1 202 123 65V MIF . N 4 GOL C 1 203 134 GOL GOL . O 5 HOH A 1 301 104 HOH HOH . O 5 HOH A 2 302 151 HOH HOH . O 5 HOH A 3 303 128 HOH HOH . O 5 HOH A 4 304 28 HOH HOH . O 5 HOH A 5 305 63 HOH HOH . O 5 HOH A 6 306 25 HOH HOH . O 5 HOH A 7 307 19 HOH HOH . O 5 HOH A 8 308 38 HOH HOH . O 5 HOH A 9 309 37 HOH HOH . O 5 HOH A 10 310 21 HOH HOH . O 5 HOH A 11 311 62 HOH HOH . O 5 HOH A 12 312 6 HOH HOH . O 5 HOH A 13 313 70 HOH HOH . O 5 HOH A 14 314 65 HOH HOH . O 5 HOH A 15 315 16 HOH HOH . O 5 HOH A 16 316 54 HOH HOH . O 5 HOH A 17 317 80 HOH HOH . O 5 HOH A 18 318 126 HOH HOH . O 5 HOH A 19 319 49 HOH HOH . O 5 HOH A 20 320 5 HOH HOH . O 5 HOH A 21 321 46 HOH HOH . O 5 HOH A 22 322 42 HOH HOH . O 5 HOH A 23 323 95 HOH HOH . O 5 HOH A 24 324 50 HOH HOH . O 5 HOH A 25 325 29 HOH HOH . O 5 HOH A 26 326 153 HOH HOH . O 5 HOH A 27 327 111 HOH HOH . O 5 HOH A 28 328 13 HOH HOH . O 5 HOH A 29 329 74 HOH HOH . O 5 HOH A 30 330 68 HOH HOH . O 5 HOH A 31 331 125 HOH HOH . O 5 HOH A 32 332 73 HOH HOH . O 5 HOH A 33 333 17 HOH HOH . O 5 HOH A 34 334 27 HOH HOH . O 5 HOH A 35 335 119 HOH HOH . O 5 HOH A 36 336 166 HOH HOH . O 5 HOH A 37 337 144 HOH HOH . O 5 HOH A 38 338 90 HOH HOH . O 5 HOH A 39 339 35 HOH HOH . O 5 HOH A 40 340 141 HOH HOH . O 5 HOH A 41 341 9 HOH HOH . O 5 HOH A 42 342 84 HOH HOH . O 5 HOH A 43 343 39 HOH HOH . O 5 HOH A 44 344 115 HOH HOH . O 5 HOH A 45 345 122 HOH HOH . O 5 HOH A 46 346 160 HOH HOH . O 5 HOH A 47 347 147 HOH HOH . O 5 HOH A 48 348 169 HOH HOH . O 5 HOH A 49 349 159 HOH HOH . O 5 HOH A 50 350 139 HOH HOH . O 5 HOH A 51 351 132 HOH HOH . O 5 HOH A 52 352 163 HOH HOH . O 5 HOH A 53 353 135 HOH HOH . O 5 HOH A 54 354 136 HOH HOH . O 5 HOH A 55 355 78 HOH HOH . O 5 HOH A 56 356 146 HOH HOH . O 5 HOH A 57 357 145 HOH HOH . O 5 HOH A 58 358 69 HOH HOH . O 5 HOH A 59 359 61 HOH HOH . O 5 HOH A 60 360 113 HOH HOH . P 5 HOH B 1 301 150 HOH HOH . P 5 HOH B 2 302 92 HOH HOH . P 5 HOH B 3 303 10 HOH HOH . P 5 HOH B 4 304 89 HOH HOH . P 5 HOH B 5 305 99 HOH HOH . P 5 HOH B 6 306 4 HOH HOH . P 5 HOH B 7 307 170 HOH HOH . P 5 HOH B 8 308 76 HOH HOH . P 5 HOH B 9 309 26 HOH HOH . P 5 HOH B 10 310 87 HOH HOH . P 5 HOH B 11 311 18 HOH HOH . P 5 HOH B 12 312 124 HOH HOH . P 5 HOH B 13 313 1 HOH HOH . P 5 HOH B 14 314 101 HOH HOH . P 5 HOH B 15 315 85 HOH HOH . P 5 HOH B 16 316 123 HOH HOH . P 5 HOH B 17 317 171 HOH HOH . P 5 HOH B 18 318 162 HOH HOH . P 5 HOH B 19 319 88 HOH HOH . P 5 HOH B 20 320 32 HOH HOH . P 5 HOH B 21 321 98 HOH HOH . P 5 HOH B 22 322 129 HOH HOH . P 5 HOH B 23 323 2 HOH HOH . P 5 HOH B 24 324 167 HOH HOH . P 5 HOH B 25 325 77 HOH HOH . P 5 HOH B 26 326 3 HOH HOH . P 5 HOH B 27 327 91 HOH HOH . P 5 HOH B 28 328 108 HOH HOH . P 5 HOH B 29 329 103 HOH HOH . P 5 HOH B 30 330 60 HOH HOH . P 5 HOH B 31 331 33 HOH HOH . P 5 HOH B 32 332 172 HOH HOH . P 5 HOH B 33 333 156 HOH HOH . P 5 HOH B 34 334 130 HOH HOH . P 5 HOH B 35 335 127 HOH HOH . P 5 HOH B 36 336 168 HOH HOH . P 5 HOH B 37 337 53 HOH HOH . P 5 HOH B 38 338 43 HOH HOH . P 5 HOH B 39 339 71 HOH HOH . P 5 HOH B 40 340 48 HOH HOH . P 5 HOH B 41 341 72 HOH HOH . P 5 HOH B 42 342 120 HOH HOH . P 5 HOH B 43 343 45 HOH HOH . P 5 HOH B 44 344 155 HOH HOH . P 5 HOH B 45 345 44 HOH HOH . P 5 HOH B 46 346 165 HOH HOH . P 5 HOH B 47 347 12 HOH HOH . P 5 HOH B 48 348 75 HOH HOH . P 5 HOH B 49 349 137 HOH HOH . P 5 HOH B 50 350 121 HOH HOH . P 5 HOH B 51 351 83 HOH HOH . P 5 HOH B 52 352 11 HOH HOH . P 5 HOH B 53 353 36 HOH HOH . P 5 HOH B 54 354 143 HOH HOH . P 5 HOH B 55 355 164 HOH HOH . P 5 HOH B 56 356 66 HOH HOH . P 5 HOH B 57 357 79 HOH HOH . P 5 HOH B 58 358 100 HOH HOH . P 5 HOH B 59 359 140 HOH HOH . P 5 HOH B 60 360 157 HOH HOH . P 5 HOH B 61 361 67 HOH HOH . P 5 HOH B 62 362 97 HOH HOH . P 5 HOH B 63 363 154 HOH HOH . P 5 HOH B 64 364 59 HOH HOH . P 5 HOH B 65 365 148 HOH HOH . P 5 HOH B 66 366 24 HOH HOH . P 5 HOH B 67 367 138 HOH HOH . Q 5 HOH C 1 301 52 HOH HOH . Q 5 HOH C 2 302 152 HOH HOH . Q 5 HOH C 3 303 34 HOH HOH . Q 5 HOH C 4 304 134 HOH HOH . Q 5 HOH C 5 305 23 HOH HOH . Q 5 HOH C 6 306 106 HOH HOH . Q 5 HOH C 7 307 41 HOH HOH . Q 5 HOH C 8 308 117 HOH HOH . Q 5 HOH C 9 309 133 HOH HOH . Q 5 HOH C 10 310 86 HOH HOH . Q 5 HOH C 11 311 131 HOH HOH . Q 5 HOH C 12 312 94 HOH HOH . Q 5 HOH C 13 313 64 HOH HOH . Q 5 HOH C 14 314 30 HOH HOH . Q 5 HOH C 15 315 8 HOH HOH . Q 5 HOH C 16 316 173 HOH HOH . Q 5 HOH C 17 317 22 HOH HOH . Q 5 HOH C 18 318 51 HOH HOH . Q 5 HOH C 19 319 149 HOH HOH . Q 5 HOH C 20 320 96 HOH HOH . Q 5 HOH C 21 321 161 HOH HOH . Q 5 HOH C 22 322 15 HOH HOH . Q 5 HOH C 23 323 58 HOH HOH . Q 5 HOH C 24 324 55 HOH HOH . Q 5 HOH C 25 325 7 HOH HOH . Q 5 HOH C 26 326 114 HOH HOH . Q 5 HOH C 27 327 112 HOH HOH . Q 5 HOH C 28 328 109 HOH HOH . Q 5 HOH C 29 329 20 HOH HOH . Q 5 HOH C 30 330 40 HOH HOH . Q 5 HOH C 31 331 47 HOH HOH . Q 5 HOH C 32 332 158 HOH HOH . Q 5 HOH C 33 333 107 HOH HOH . Q 5 HOH C 34 334 14 HOH HOH . Q 5 HOH C 35 335 31 HOH HOH . Q 5 HOH C 36 336 81 HOH HOH . Q 5 HOH C 37 337 93 HOH HOH . Q 5 HOH C 38 338 57 HOH HOH . Q 5 HOH C 39 339 142 HOH HOH . Q 5 HOH C 40 340 82 HOH HOH . Q 5 HOH C 41 341 110 HOH HOH . Q 5 HOH C 42 342 118 HOH HOH . Q 5 HOH C 43 343 105 HOH HOH . Q 5 HOH C 44 344 116 HOH HOH . Q 5 HOH C 45 345 102 HOH HOH . Q 5 HOH C 46 346 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . K 4 -30.769 -0.019 -23.453 1 38.73 ? C1 GOL 205 B 1 HETATM 2 O O1 GOL . . . K 4 -31.61 -0.596 -22.449 1 36.44 ? O1 GOL 205 B 1 HETATM 3 C C2 GOL . . . K 4 -31.519 0.126 -24.772 1 39.08 ? C2 GOL 205 B 1 HETATM 4 O O2 GOL . . . K 4 -32.88 0.5 -24.522 1 38.98 ? O2 GOL 205 B 1 HETATM 5 C C3 GOL . . . K 4 -30.821 1.186 -25.622 1 40.4 ? C3 GOL 205 B 1 HETATM 6 O O3 GOL . . . K 4 -30.704 0.772 -26.983 1 43.27 ? O3 GOL 205 B 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #