data_5HVX # _model_server_result.job_id Z_skJefFLNViHaspNoiJXw _model_server_result.datetime_utc '2024-10-12 05:19:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hvx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 5HVX # _exptl.entry_id 5HVX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 379.489 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEGA-10 _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HVX _cell.length_a 109 _cell.length_b 109 _cell.length_c 210.59 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HVX _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 109 109 0 3 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 109 0 0 4 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 109 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C NA NA . A NA 302 1_555 J O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.183 ? metalc ? metalc2 C NA NA . A NA 302 1_555 J O HOH . A HOH 402 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 3.183 ? # _chem_comp.formula 'C18 H37 N O7' _chem_comp.formula_weight 379.489 _chem_comp.id 2CV _chem_comp.mon_nstd_flag . _chem_comp.name HEGA-10 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C12 2CV sing 87 n n C9 C1 2CV sing 88 n n C12 C15 2CV sing 89 n n C15 C18 2CV sing 90 n n C18 C21 2CV sing 91 n n C21 C24 2CV sing 92 n n C24 C27 2CV sing 93 n n C27 C30 2CV sing 94 n n C30 N33 2CV sing 95 n n C30 O34 2CV doub 96 n n N33 C35 2CV sing 97 n n N33 C36 2CV sing 98 n n C35 C60 2CV sing 99 n n C36 C37 2CV sing 100 n n C37 C40 2CV sing 101 n n C37 O47 2CV sing 102 n n C40 C41 2CV sing 103 n n C40 O49 2CV sing 104 n n C41 C42 2CV sing 105 n n C41 O51 2CV sing 106 n n C42 C43 2CV sing 107 n n C42 O53 2CV sing 108 n n C43 O44 2CV sing 109 n n C60 O63 2CV sing 110 n n C1 C0 2CV sing 111 n n C9 H91C 2CV sing 112 n n C9 H92C 2CV sing 113 n n C12 H121 2CV sing 114 n n C12 H122 2CV sing 115 n n C1 H11C 2CV sing 116 n n C1 H12C 2CV sing 117 n n C15 H151 2CV sing 118 n n C15 H152 2CV sing 119 n n C18 H181 2CV sing 120 n n C18 H182 2CV sing 121 n n C21 H211 2CV sing 122 n n C21 H212 2CV sing 123 n n C24 H241 2CV sing 124 n n C24 H242 2CV sing 125 n n C27 H271 2CV sing 126 n n C27 H272 2CV sing 127 n n C35 H351 2CV sing 128 n n C35 H352 2CV sing 129 n n C36 H361 2CV sing 130 n n C36 H362 2CV sing 131 n n C60 H601 2CV sing 132 n n C60 H602 2CV sing 133 n n C37 H37 2CV sing 134 n n C40 H40 2CV sing 135 n n O47 H47 2CV sing 136 n n C41 H41 2CV sing 137 n n O49 H49 2CV sing 138 n n C42 H42 2CV sing 139 n n O51 H51 2CV sing 140 n n C43 H431 2CV sing 141 n n C43 H432 2CV sing 142 n n O53 H53 2CV sing 143 n n O44 H44 2CV sing 144 n n O63 H63 2CV sing 145 n n C0 H01C 2CV sing 146 n n C0 H02C 2CV sing 147 n n C0 H03C 2CV sing 148 n n # _atom_sites.entry_id 5HVX _atom_sites.fract_transf_matrix[1][1] 0.009174 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009174 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004749 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 301 301 NA NA . C 2 NA A 1 302 302 NA NA . D 2 NA A 1 303 303 NA NA . E 3 2CV A 1 304 401 2CV 2CV . F 4 12P A 1 305 501 12P 12P . G 5 EDO A 1 306 1 EDO EDO . H 6 MES A 1 307 1 MES MES . I 6 MES A 1 308 2 MES MES . J 7 HOH A 1 401 65 HOH HOH . J 7 HOH A 2 402 64 HOH HOH . J 7 HOH A 3 403 2 HOH HOH . J 7 HOH A 4 404 4 HOH HOH . J 7 HOH A 5 405 15 HOH HOH . J 7 HOH A 6 406 96 HOH HOH . J 7 HOH A 7 407 28 HOH HOH . J 7 HOH A 8 408 5 HOH HOH . J 7 HOH A 9 409 78 HOH HOH . J 7 HOH A 10 410 11 HOH HOH . J 7 HOH A 11 411 6 HOH HOH . J 7 HOH A 12 412 32 HOH HOH . J 7 HOH A 13 413 7 HOH HOH . J 7 HOH A 14 414 66 HOH HOH . J 7 HOH A 15 415 45 HOH HOH . J 7 HOH A 16 416 25 HOH HOH . J 7 HOH A 17 417 44 HOH HOH . J 7 HOH A 18 418 87 HOH HOH . J 7 HOH A 19 419 14 HOH HOH . J 7 HOH A 20 420 99 HOH HOH . J 7 HOH A 21 421 9 HOH HOH . J 7 HOH A 22 422 79 HOH HOH . J 7 HOH A 23 423 91 HOH HOH . J 7 HOH A 24 424 50 HOH HOH . J 7 HOH A 25 425 3 HOH HOH . J 7 HOH A 26 426 55 HOH HOH . J 7 HOH A 27 427 83 HOH HOH . J 7 HOH A 28 428 18 HOH HOH . J 7 HOH A 29 429 67 HOH HOH . J 7 HOH A 30 430 77 HOH HOH . J 7 HOH A 31 431 16 HOH HOH . J 7 HOH A 32 432 49 HOH HOH . J 7 HOH A 33 433 19 HOH HOH . J 7 HOH A 34 434 13 HOH HOH . J 7 HOH A 35 435 22 HOH HOH . J 7 HOH A 36 436 27 HOH HOH . J 7 HOH A 37 437 71 HOH HOH . J 7 HOH A 38 438 61 HOH HOH . J 7 HOH A 39 439 39 HOH HOH . J 7 HOH A 40 440 81 HOH HOH . J 7 HOH A 41 441 69 HOH HOH . J 7 HOH A 42 442 88 HOH HOH . J 7 HOH A 43 443 56 HOH HOH . J 7 HOH A 44 444 86 HOH HOH . J 7 HOH A 45 445 98 HOH HOH . J 7 HOH A 46 446 40 HOH HOH . J 7 HOH A 47 447 1 HOH HOH . J 7 HOH A 48 448 62 HOH HOH . J 7 HOH A 49 449 52 HOH HOH . J 7 HOH A 50 450 48 HOH HOH . J 7 HOH A 51 451 76 HOH HOH . J 7 HOH A 52 452 100 HOH HOH . J 7 HOH A 53 453 53 HOH HOH . J 7 HOH A 54 454 54 HOH HOH . J 7 HOH A 55 455 33 HOH HOH . J 7 HOH A 56 456 17 HOH HOH . J 7 HOH A 57 457 97 HOH HOH . J 7 HOH A 58 458 82 HOH HOH . J 7 HOH A 59 459 95 HOH HOH . J 7 HOH A 60 460 21 HOH HOH . J 7 HOH A 61 461 47 HOH HOH . J 7 HOH A 62 462 23 HOH HOH . J 7 HOH A 63 463 12 HOH HOH . J 7 HOH A 64 464 31 HOH HOH . J 7 HOH A 65 465 8 HOH HOH . J 7 HOH A 66 466 35 HOH HOH . J 7 HOH A 67 467 41 HOH HOH . J 7 HOH A 68 468 20 HOH HOH . J 7 HOH A 69 469 29 HOH HOH . J 7 HOH A 70 470 42 HOH HOH . J 7 HOH A 71 471 93 HOH HOH . J 7 HOH A 72 472 90 HOH HOH . J 7 HOH A 73 473 46 HOH HOH . J 7 HOH A 74 474 24 HOH HOH . J 7 HOH A 75 475 94 HOH HOH . J 7 HOH A 76 476 10 HOH HOH . J 7 HOH A 77 477 43 HOH HOH . J 7 HOH A 78 478 26 HOH HOH . J 7 HOH A 79 479 51 HOH HOH . J 7 HOH A 80 480 60 HOH HOH . J 7 HOH A 81 481 37 HOH HOH . J 7 HOH A 82 482 92 HOH HOH . J 7 HOH A 83 483 63 HOH HOH . J 7 HOH A 84 484 70 HOH HOH . J 7 HOH A 85 485 36 HOH HOH . J 7 HOH A 86 486 38 HOH HOH . J 7 HOH A 87 487 80 HOH HOH . J 7 HOH A 88 488 30 HOH HOH . J 7 HOH A 89 489 58 HOH HOH . J 7 HOH A 90 490 34 HOH HOH . J 7 HOH A 91 491 73 HOH HOH . J 7 HOH A 92 492 89 HOH HOH . J 7 HOH A 93 493 84 HOH HOH . J 7 HOH A 94 494 59 HOH HOH . J 7 HOH A 95 495 75 HOH HOH . J 7 HOH A 96 496 57 HOH HOH . J 7 HOH A 97 497 74 HOH HOH . J 7 HOH A 98 498 72 HOH HOH . J 7 HOH A 99 499 68 HOH HOH . J 7 HOH A 100 500 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 2CV . . . E 3 71.03 49.1 19.954 1 72.31 ? C9 2CV 304 A 1 HETATM 2 C C12 2CV . . . E 3 72.356 49.28 19.245 1 70.28 ? C12 2CV 304 A 1 HETATM 3 C C15 2CV . . . E 3 72.246 49.684 17.783 1 66.69 ? C15 2CV 304 A 1 HETATM 4 C C18 2CV . . . E 3 73.565 49.642 17.041 1 63.31 ? C18 2CV 304 A 1 HETATM 5 C C21 2CV . . . E 3 73.42 49.918 15.586 1 63.03 ? C21 2CV 304 A 1 HETATM 6 C C24 2CV . . . E 3 74.68 49.809 14.767 1 65.56 ? C24 2CV 304 A 1 HETATM 7 C C27 2CV . . . E 3 74.419 50.228 13.323 1 70.99 ? C27 2CV 304 A 1 HETATM 8 C C30 2CV . . . E 3 75.61 50.044 12.409 1 77.84 ? C30 2CV 304 A 1 HETATM 9 N N33 2CV . . . E 3 75.403 50.138 11.074 1 83.83 ? N33 2CV 304 A 1 HETATM 10 O O34 2CV . . . E 3 76.722 49.85 12.873 1 80.22 ? O34 2CV 304 A 1 HETATM 11 C C35 2CV . . . E 3 74.096 50.461 10.474 1 81.6 ? C35 2CV 304 A 1 HETATM 12 C C36 2CV . . . E 3 76.487 49.883 10.116 1 91.14 ? C36 2CV 304 A 1 HETATM 13 C C37 2CV . . . E 3 77.475 51.027 9.9 1 97.44 ? C37 2CV 304 A 1 HETATM 14 C C40 2CV . . . E 3 78.314 50.765 8.65 1 98.74 ? C40 2CV 304 A 1 HETATM 15 O O47 2CV . . . E 3 78.337 51.155 11.033 1 101.09 ? O47 2CV 304 A 1 HETATM 16 O O49 2CV . . . E 3 79.467 51.6 8.668 1 100.25 ? O49 2CV 304 A 1 HETATM 17 C C60 2CV . . . E 3 73.351 49.266 9.926 1 82.58 ? C60 2CV 304 A 1 HETATM 18 O O63 2CV . . . E 3 72.183 49.675 9.221 1 83.95 ? O63 2CV 304 A 1 HETATM 19 C C1 2CV . . . E 3 71.177 48.571 21.367 1 75.93 ? C1 2CV 304 A 1 HETATM 20 C C0 2CV . . . E 3 69.886 48.538 22.176 1 76.9 ? C0 2CV 304 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #