data_5HVX # _model_server_result.job_id 3Qvd5LsEuLgDMBnPkNXvaw _model_server_result.datetime_utc '2024-10-12 05:27:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hvx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":307}' # _entry.id 5HVX # _exptl.entry_id 5HVX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HVX _cell.length_a 109 _cell.length_b 109 _cell.length_c 210.59 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HVX _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 109 109 0 3 'crystal symmetry operation' 3_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 109 0 0 4 'crystal symmetry operation' 4_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 109 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 H N N ? 6 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C NA NA . A NA 302 1_555 J O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.183 ? metalc ? metalc2 C NA NA . A NA 302 1_555 J O HOH . A HOH 402 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 3.183 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 375 n n O1 C6 MES sing 376 n n C2 C3 MES sing 377 n n C2 H21 MES sing 378 n n C2 H22 MES sing 379 n n C3 N4 MES sing 380 n n C3 H31 MES sing 381 n n C3 H32 MES sing 382 n n N4 C5 MES sing 383 n n N4 C7 MES sing 384 n n N4 HN4 MES sing 385 n n C5 C6 MES sing 386 n n C5 H51 MES sing 387 n n C5 H52 MES sing 388 n n C6 H61 MES sing 389 n n C6 H62 MES sing 390 n n C7 C8 MES sing 391 n n C7 H71 MES sing 392 n n C7 H72 MES sing 393 n n C8 S MES sing 394 n n C8 H81 MES sing 395 n n C8 H82 MES sing 396 n n S O1S MES doub 397 n n S O2S MES doub 398 n n S O3S MES sing 399 n n # _atom_sites.entry_id 5HVX _atom_sites.fract_transf_matrix[1][1] 0.009174 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009174 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004749 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 301 301 NA NA . C 2 NA A 1 302 302 NA NA . D 2 NA A 1 303 303 NA NA . E 3 2CV A 1 304 401 2CV 2CV . F 4 12P A 1 305 501 12P 12P . G 5 EDO A 1 306 1 EDO EDO . H 6 MES A 1 307 1 MES MES . I 6 MES A 1 308 2 MES MES . J 7 HOH A 1 401 65 HOH HOH . J 7 HOH A 2 402 64 HOH HOH . J 7 HOH A 3 403 2 HOH HOH . J 7 HOH A 4 404 4 HOH HOH . J 7 HOH A 5 405 15 HOH HOH . J 7 HOH A 6 406 96 HOH HOH . J 7 HOH A 7 407 28 HOH HOH . J 7 HOH A 8 408 5 HOH HOH . J 7 HOH A 9 409 78 HOH HOH . J 7 HOH A 10 410 11 HOH HOH . J 7 HOH A 11 411 6 HOH HOH . J 7 HOH A 12 412 32 HOH HOH . J 7 HOH A 13 413 7 HOH HOH . J 7 HOH A 14 414 66 HOH HOH . J 7 HOH A 15 415 45 HOH HOH . J 7 HOH A 16 416 25 HOH HOH . J 7 HOH A 17 417 44 HOH HOH . J 7 HOH A 18 418 87 HOH HOH . J 7 HOH A 19 419 14 HOH HOH . J 7 HOH A 20 420 99 HOH HOH . J 7 HOH A 21 421 9 HOH HOH . J 7 HOH A 22 422 79 HOH HOH . J 7 HOH A 23 423 91 HOH HOH . J 7 HOH A 24 424 50 HOH HOH . J 7 HOH A 25 425 3 HOH HOH . J 7 HOH A 26 426 55 HOH HOH . J 7 HOH A 27 427 83 HOH HOH . J 7 HOH A 28 428 18 HOH HOH . J 7 HOH A 29 429 67 HOH HOH . J 7 HOH A 30 430 77 HOH HOH . J 7 HOH A 31 431 16 HOH HOH . J 7 HOH A 32 432 49 HOH HOH . J 7 HOH A 33 433 19 HOH HOH . J 7 HOH A 34 434 13 HOH HOH . J 7 HOH A 35 435 22 HOH HOH . J 7 HOH A 36 436 27 HOH HOH . J 7 HOH A 37 437 71 HOH HOH . J 7 HOH A 38 438 61 HOH HOH . J 7 HOH A 39 439 39 HOH HOH . J 7 HOH A 40 440 81 HOH HOH . J 7 HOH A 41 441 69 HOH HOH . J 7 HOH A 42 442 88 HOH HOH . J 7 HOH A 43 443 56 HOH HOH . J 7 HOH A 44 444 86 HOH HOH . J 7 HOH A 45 445 98 HOH HOH . J 7 HOH A 46 446 40 HOH HOH . J 7 HOH A 47 447 1 HOH HOH . J 7 HOH A 48 448 62 HOH HOH . J 7 HOH A 49 449 52 HOH HOH . J 7 HOH A 50 450 48 HOH HOH . J 7 HOH A 51 451 76 HOH HOH . J 7 HOH A 52 452 100 HOH HOH . J 7 HOH A 53 453 53 HOH HOH . J 7 HOH A 54 454 54 HOH HOH . J 7 HOH A 55 455 33 HOH HOH . J 7 HOH A 56 456 17 HOH HOH . J 7 HOH A 57 457 97 HOH HOH . J 7 HOH A 58 458 82 HOH HOH . J 7 HOH A 59 459 95 HOH HOH . J 7 HOH A 60 460 21 HOH HOH . J 7 HOH A 61 461 47 HOH HOH . J 7 HOH A 62 462 23 HOH HOH . J 7 HOH A 63 463 12 HOH HOH . J 7 HOH A 64 464 31 HOH HOH . J 7 HOH A 65 465 8 HOH HOH . J 7 HOH A 66 466 35 HOH HOH . J 7 HOH A 67 467 41 HOH HOH . J 7 HOH A 68 468 20 HOH HOH . J 7 HOH A 69 469 29 HOH HOH . J 7 HOH A 70 470 42 HOH HOH . J 7 HOH A 71 471 93 HOH HOH . J 7 HOH A 72 472 90 HOH HOH . J 7 HOH A 73 473 46 HOH HOH . J 7 HOH A 74 474 24 HOH HOH . J 7 HOH A 75 475 94 HOH HOH . J 7 HOH A 76 476 10 HOH HOH . J 7 HOH A 77 477 43 HOH HOH . J 7 HOH A 78 478 26 HOH HOH . J 7 HOH A 79 479 51 HOH HOH . J 7 HOH A 80 480 60 HOH HOH . J 7 HOH A 81 481 37 HOH HOH . J 7 HOH A 82 482 92 HOH HOH . J 7 HOH A 83 483 63 HOH HOH . J 7 HOH A 84 484 70 HOH HOH . J 7 HOH A 85 485 36 HOH HOH . J 7 HOH A 86 486 38 HOH HOH . J 7 HOH A 87 487 80 HOH HOH . J 7 HOH A 88 488 30 HOH HOH . J 7 HOH A 89 489 58 HOH HOH . J 7 HOH A 90 490 34 HOH HOH . J 7 HOH A 91 491 73 HOH HOH . J 7 HOH A 92 492 89 HOH HOH . J 7 HOH A 93 493 84 HOH HOH . J 7 HOH A 94 494 59 HOH HOH . J 7 HOH A 95 495 75 HOH HOH . J 7 HOH A 96 496 57 HOH HOH . J 7 HOH A 97 497 74 HOH HOH . J 7 HOH A 98 498 72 HOH HOH . J 7 HOH A 99 499 68 HOH HOH . J 7 HOH A 100 500 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . H 6 44.746 79.494 43.019 1 173 ? O1 MES 307 A 1 HETATM 2 C C2 MES . . . H 6 44.819 80.761 42.362 1 172.89 ? C2 MES 307 A 1 HETATM 3 C C3 MES . . . H 6 44.239 80.693 40.97 1 172.91 ? C3 MES 307 A 1 HETATM 4 N N4 MES . . . H 6 44.953 79.649 40.166 1 172.96 ? N4 MES 307 A 1 HETATM 5 C C5 MES . . . H 6 44.935 78.338 40.892 1 172.83 ? C5 MES 307 A 1 HETATM 6 C C6 MES . . . H 6 45.483 78.512 42.289 1 172.88 ? C6 MES 307 A 1 HETATM 7 C C7 MES . . . H 6 44.349 79.518 38.796 1 173.23 ? C7 MES 307 A 1 HETATM 8 C C8 MES . . . H 6 45.315 79.876 37.687 1 173.74 ? C8 MES 307 A 1 HETATM 9 S S MES . . . H 6 44.526 79.658 36.107 1 174.5 ? S MES 307 A 1 HETATM 10 O O1S MES . . . H 6 45.523 80 35.107 1 174.91 ? O1S MES 307 A 1 HETATM 11 O O2S MES . . . H 6 44.128 78.261 36.04 1 174.54 ? O2S MES 307 A 1 HETATM 12 O O3S MES . . . H 6 43.389 80.562 36.093 1 174.73 ? O3S MES 307 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #