data_5HWI # _model_server_result.job_id MrGUInFoiBX83wQ2MoLmQg _model_server_result.datetime_utc '2025-07-02 23:29:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5hwi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5HWI # _exptl.entry_id 5HWI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5HWI _cell.length_a 110.545 _cell.length_b 110.545 _cell.length_c 42.592 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5HWI _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 41 A GLN 41 1_555 A N MSE 42 A MSE 42 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C GLN 41 A GLN 41 1_555 A N MSE 42 A MSE 42 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C MSE 42 A MSE 42 1_555 A N SER 43 A SER 43 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale4 A C MSE 42 A MSE 42 1_555 A N SER 43 A SER 43 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale5 A C GLU 140 A GLU 140 1_555 A N MSE 141 A MSE 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale6 A C MSE 141 A MSE 141 1_555 A N LEU 142 A LEU 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale7 A C THR 175 A THR 175 1_555 A N MSE 176 A MSE 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale8 A C MSE 176 A MSE 176 1_555 A N ASP 177 A ASP 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale9 A C GLN 206 A GLN 206 1_555 A N MSE 207 A MSE 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.305 ? covale ? covale10 A C MSE 207 A MSE 207 1_555 A N PRO 208 A PRO 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.285 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 5HWI _atom_sites.fract_transf_matrix[1][1] 0.009046 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009046 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023479 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SIN A 1 301 1 SIN SIN . C 3 GOL A 1 302 2 GOL GOL . D 4 HOH A 1 401 72 HOH HOH . D 4 HOH A 2 402 74 HOH HOH . D 4 HOH A 3 403 68 HOH HOH . D 4 HOH A 4 404 142 HOH HOH . D 4 HOH A 5 405 32 HOH HOH . D 4 HOH A 6 406 143 HOH HOH . D 4 HOH A 7 407 31 HOH HOH . D 4 HOH A 8 408 5 HOH HOH . D 4 HOH A 9 409 115 HOH HOH . D 4 HOH A 10 410 22 HOH HOH . D 4 HOH A 11 411 46 HOH HOH . D 4 HOH A 12 412 12 HOH HOH . D 4 HOH A 13 413 120 HOH HOH . D 4 HOH A 14 414 92 HOH HOH . D 4 HOH A 15 415 24 HOH HOH . D 4 HOH A 16 416 2 HOH HOH . D 4 HOH A 17 417 42 HOH HOH . D 4 HOH A 18 418 20 HOH HOH . D 4 HOH A 19 419 37 HOH HOH . D 4 HOH A 20 420 129 HOH HOH . D 4 HOH A 21 421 9 HOH HOH . D 4 HOH A 22 422 28 HOH HOH . D 4 HOH A 23 423 3 HOH HOH . D 4 HOH A 24 424 29 HOH HOH . D 4 HOH A 25 425 109 HOH HOH . D 4 HOH A 26 426 8 HOH HOH . D 4 HOH A 27 427 51 HOH HOH . D 4 HOH A 28 428 133 HOH HOH . D 4 HOH A 29 429 40 HOH HOH . D 4 HOH A 30 430 71 HOH HOH . D 4 HOH A 31 431 60 HOH HOH . D 4 HOH A 32 432 1 HOH HOH . D 4 HOH A 33 433 141 HOH HOH . D 4 HOH A 34 434 124 HOH HOH . D 4 HOH A 35 435 15 HOH HOH . D 4 HOH A 36 436 132 HOH HOH . D 4 HOH A 37 437 104 HOH HOH . D 4 HOH A 38 438 76 HOH HOH . D 4 HOH A 39 439 127 HOH HOH . D 4 HOH A 40 440 73 HOH HOH . D 4 HOH A 41 441 78 HOH HOH . D 4 HOH A 42 442 52 HOH HOH . D 4 HOH A 43 443 41 HOH HOH . D 4 HOH A 44 444 49 HOH HOH . D 4 HOH A 45 445 4 HOH HOH . D 4 HOH A 46 446 14 HOH HOH . D 4 HOH A 47 447 134 HOH HOH . D 4 HOH A 48 448 65 HOH HOH . D 4 HOH A 49 449 10 HOH HOH . D 4 HOH A 50 450 50 HOH HOH . D 4 HOH A 51 451 125 HOH HOH . D 4 HOH A 52 452 43 HOH HOH . D 4 HOH A 53 453 56 HOH HOH . D 4 HOH A 54 454 16 HOH HOH . D 4 HOH A 55 455 81 HOH HOH . D 4 HOH A 56 456 86 HOH HOH . D 4 HOH A 57 457 30 HOH HOH . D 4 HOH A 58 458 98 HOH HOH . D 4 HOH A 59 459 102 HOH HOH . D 4 HOH A 60 460 110 HOH HOH . D 4 HOH A 61 461 7 HOH HOH . D 4 HOH A 62 462 34 HOH HOH . D 4 HOH A 63 463 80 HOH HOH . D 4 HOH A 64 464 57 HOH HOH . D 4 HOH A 65 465 84 HOH HOH . D 4 HOH A 66 466 107 HOH HOH . D 4 HOH A 67 467 67 HOH HOH . D 4 HOH A 68 468 13 HOH HOH . D 4 HOH A 69 469 59 HOH HOH . D 4 HOH A 70 470 93 HOH HOH . D 4 HOH A 71 471 131 HOH HOH . D 4 HOH A 72 472 26 HOH HOH . D 4 HOH A 73 473 58 HOH HOH . D 4 HOH A 74 474 135 HOH HOH . D 4 HOH A 75 475 53 HOH HOH . D 4 HOH A 76 476 27 HOH HOH . D 4 HOH A 77 477 33 HOH HOH . D 4 HOH A 78 478 61 HOH HOH . D 4 HOH A 79 479 18 HOH HOH . D 4 HOH A 80 480 23 HOH HOH . D 4 HOH A 81 481 64 HOH HOH . D 4 HOH A 82 482 91 HOH HOH . D 4 HOH A 83 483 11 HOH HOH . D 4 HOH A 84 484 54 HOH HOH . D 4 HOH A 85 485 70 HOH HOH . D 4 HOH A 86 486 17 HOH HOH . D 4 HOH A 87 487 118 HOH HOH . D 4 HOH A 88 488 62 HOH HOH . D 4 HOH A 89 489 6 HOH HOH . D 4 HOH A 90 490 45 HOH HOH . D 4 HOH A 91 491 47 HOH HOH . D 4 HOH A 92 492 130 HOH HOH . D 4 HOH A 93 493 114 HOH HOH . D 4 HOH A 94 494 94 HOH HOH . D 4 HOH A 95 495 140 HOH HOH . D 4 HOH A 96 496 77 HOH HOH . D 4 HOH A 97 497 55 HOH HOH . D 4 HOH A 98 498 117 HOH HOH . D 4 HOH A 99 499 128 HOH HOH . D 4 HOH A 100 500 97 HOH HOH . D 4 HOH A 101 501 66 HOH HOH . D 4 HOH A 102 502 69 HOH HOH . D 4 HOH A 103 503 83 HOH HOH . D 4 HOH A 104 504 138 HOH HOH . D 4 HOH A 105 505 79 HOH HOH . D 4 HOH A 106 506 44 HOH HOH . D 4 HOH A 107 507 112 HOH HOH . D 4 HOH A 108 508 19 HOH HOH . D 4 HOH A 109 509 137 HOH HOH . D 4 HOH A 110 510 121 HOH HOH . D 4 HOH A 111 511 25 HOH HOH . D 4 HOH A 112 512 82 HOH HOH . D 4 HOH A 113 513 35 HOH HOH . D 4 HOH A 114 514 136 HOH HOH . D 4 HOH A 115 515 103 HOH HOH . D 4 HOH A 116 516 105 HOH HOH . D 4 HOH A 117 517 139 HOH HOH . D 4 HOH A 118 518 95 HOH HOH . D 4 HOH A 119 519 96 HOH HOH . D 4 HOH A 120 520 48 HOH HOH . D 4 HOH A 121 521 113 HOH HOH . D 4 HOH A 122 522 87 HOH HOH . D 4 HOH A 123 523 111 HOH HOH . D 4 HOH A 124 524 126 HOH HOH . D 4 HOH A 125 525 119 HOH HOH . D 4 HOH A 126 526 75 HOH HOH . D 4 HOH A 127 527 116 HOH HOH . D 4 HOH A 128 528 123 HOH HOH . D 4 HOH A 129 529 63 HOH HOH . D 4 HOH A 130 530 85 HOH HOH . D 4 HOH A 131 531 39 HOH HOH . D 4 HOH A 132 532 38 HOH HOH . D 4 HOH A 133 533 90 HOH HOH . D 4 HOH A 134 534 89 HOH HOH . D 4 HOH A 135 535 99 HOH HOH . D 4 HOH A 136 536 101 HOH HOH . D 4 HOH A 137 537 21 HOH HOH . D 4 HOH A 138 538 106 HOH HOH . D 4 HOH A 139 539 122 HOH HOH . D 4 HOH A 140 540 100 HOH HOH . D 4 HOH A 141 541 88 HOH HOH . D 4 HOH A 142 542 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 12.306 61.642 -4.698 1 86.15 ? C1 GOL 302 A 1 HETATM 2 O O1 GOL . . . C 3 11.342 61.299 -3.721 1 82.67 ? O1 GOL 302 A 1 HETATM 3 C C2 GOL . . . C 3 13.67 61.196 -4.181 1 88.08 ? C2 GOL 302 A 1 HETATM 4 O O2 GOL . . . C 3 14.235 62.115 -3.273 1 86.68 ? O2 GOL 302 A 1 HETATM 5 C C3 GOL . . . C 3 14.679 60.874 -5.275 1 90.16 ? C3 GOL 302 A 1 HETATM 6 O O3 GOL . . . C 3 15.913 60.685 -4.616 1 87.21 ? O3 GOL 302 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #